EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000019480 (Gene tree)
Gene ID: 105927975
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 75342 bases
Position: chrKN811316.1:2496992-2572333
Accession: 105927975
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000017730	S1	PF00575.23	2.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000026492	-	4047	XM_012865012	ENSFHEP00000017730	1017 (aa)	XP_012720466	UPI000644CCCD

Gene Model

Click here to download ENSFHEG00000019480's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000019480's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000019480	si:ch211-117n7.8	93	53.148	ENSG00000068784	SRBD1	95	53.148	Homo_sapiens
ENSFHEG00000019480	si:ch211-117n7.8	100	79.317	ENSAPOG00000005103	si:ch211-117n7.8	100	79.317	Acanthochromis_polyacanthus
ENSFHEG00000019480	si:ch211-117n7.8	82	57.901	ENSAMEG00000005993	SRBD1	84	57.901	Ailuropoda_melanoleuca
ENSFHEG00000019480	si:ch211-117n7.8	97	79.293	ENSACIG00000009875	si:ch211-117n7.8	100	79.293	Amphilophus_citrinellus
ENSFHEG00000019480	si:ch211-117n7.8	100	78.508	ENSAOCG00000024718	si:ch211-117n7.8	100	78.508	Amphiprion_ocellaris
ENSFHEG00000019480	si:ch211-117n7.8	97	78.665	ENSAPEG00000002645	si:ch211-117n7.8	99	78.665	Amphiprion_percula
ENSFHEG00000019480	si:ch211-117n7.8	100	75.734	ENSATEG00000010844	si:ch211-117n7.8	100	77.028	Anabas_testudineus
ENSFHEG00000019480	si:ch211-117n7.8	93	55.020	ENSAPLG00000006313	SRBD1	99	52.622	Anas_platyrhynchos
ENSFHEG00000019480	si:ch211-117n7.8	92	52.917	ENSANAG00000025573	SRBD1	95	52.917	Aotus_nancymaae
ENSFHEG00000019480	si:ch211-117n7.8	100	80.000	ENSACLG00000024219	si:ch211-117n7.8	100	80.683	Astatotilapia_calliptera
ENSFHEG00000019480	si:ch211-117n7.8	100	63.875	ENSAMXG00000004294	SRBD1	100	64.626	Astyanax_mexicanus
ENSFHEG00000019480	si:ch211-117n7.8	82	57.833	ENSBTAG00000007508	SRBD1	81	57.833	Bos_taurus
ENSFHEG00000019480	si:ch211-117n7.8	93	53.099	ENSCJAG00000000727	SRBD1	95	53.099	Callithrix_jacchus
ENSFHEG00000019480	si:ch211-117n7.8	92	52.923	ENSCAFG00000002554	SRBD1	96	52.923	Canis_familiaris
ENSFHEG00000019480	si:ch211-117n7.8	92	50.410	ENSCAFG00020026284	SRBD1	97	58.662	Canis_lupus_dingo
ENSFHEG00000019480	si:ch211-117n7.8	82	57.951	ENSCHIG00000016535	SRBD1	82	57.951	Capra_hircus
ENSFHEG00000019480	si:ch211-117n7.8	93	53.656	ENSTSYG00000012797	SRBD1	99	51.727	Carlito_syrichta
ENSFHEG00000019480	si:ch211-117n7.8	93	53.983	ENSCPOG00000004773	SRBD1	95	53.983	Cavia_porcellus
ENSFHEG00000019480	si:ch211-117n7.8	92	53.333	ENSCCAG00000025589	SRBD1	95	53.333	Cebus_capucinus
ENSFHEG00000019480	si:ch211-117n7.8	93	52.784	ENSCATG00000039530	SRBD1	95	52.784	Cercocebus_atys
ENSFHEG00000019480	si:ch211-117n7.8	93	54.498	ENSCLAG00000008623	SRBD1	95	54.498	Chinchilla_lanigera
ENSFHEG00000019480	si:ch211-117n7.8	93	52.881	ENSCSAG00000013350	SRBD1	95	52.881	Chlorocebus_sabaeus
ENSFHEG00000019480	si:ch211-117n7.8	70	81.395	ENSCHOG00000003805	SRBD1	69	81.395	Choloepus_hoffmanni
ENSFHEG00000019480	si:ch211-117n7.8	94	54.076	ENSCPBG00000005677	SRBD1	99	51.764	Chrysemys_picta_bellii
ENSFHEG00000019480	si:ch211-117n7.8	77	40.994	ENSCING00000005950	-	99	40.994	Ciona_intestinalis
ENSFHEG00000019480	si:ch211-117n7.8	77	42.191	ENSCSAVG00000000861	-	99	42.191	Ciona_savignyi
ENSFHEG00000019480	si:ch211-117n7.8	93	52.680	ENSCANG00000016307	SRBD1	96	52.680	Colobus_angolensis_palliatus
ENSFHEG00000019480	si:ch211-117n7.8	83	58.186	ENSCGRG00001000513	Srbd1	85	58.186	Cricetulus_griseus_chok1gshd
ENSFHEG00000019480	si:ch211-117n7.8	83	58.186	ENSCGRG00000002283	Srbd1	85	58.186	Cricetulus_griseus_crigri
ENSFHEG00000019480	si:ch211-117n7.8	100	70.450	ENSCSEG00000000856	si:ch211-117n7.8	100	70.646	Cynoglossus_semilaevis
ENSFHEG00000019480	si:ch211-117n7.8	98	81.855	ENSCVAG00000020212	si:ch211-117n7.8	99	81.855	Cyprinodon_variegatus
ENSFHEG00000019480	si:ch211-117n7.8	82	56.925	ENSDNOG00000018686	SRBD1	83	56.925	Dasypus_novemcinctus
ENSFHEG00000019480	si:ch211-117n7.8	84	57.809	ENSDORG00000010468	Srbd1	86	57.809	Dipodomys_ordii
ENSFHEG00000019480	si:ch211-117n7.8	77	36.967	FBgn0051156	CG31156	79	36.967	Drosophila_melanogaster
ENSFHEG00000019480	si:ch211-117n7.8	83	58.364	ENSETEG00000000739	SRBD1	89	58.364	Echinops_telfairi
ENSFHEG00000019480	si:ch211-117n7.8	71	47.658	ENSEBUG00000008902	si:ch211-117n7.8	95	47.658	Eptatretus_burgeri
ENSFHEG00000019480	si:ch211-117n7.8	82	56.184	ENSEASG00005003132	SRBD1	98	57.143	Equus_asinus_asinus
ENSFHEG00000019480	si:ch211-117n7.8	82	58.304	ENSECAG00000013865	SRBD1	82	58.304	Equus_caballus
ENSFHEG00000019480	si:ch211-117n7.8	100	64.628	ENSELUG00000012592	si:ch211-117n7.8	100	64.756	Esox_lucius
ENSFHEG00000019480	si:ch211-117n7.8	93	52.959	ENSFCAG00000005101	SRBD1	96	52.959	Felis_catus
ENSFHEG00000019480	si:ch211-117n7.8	82	58.118	ENSFALG00000012966	SRBD1	97	52.626	Ficedula_albicollis
ENSFHEG00000019480	si:ch211-117n7.8	92	54.498	ENSFDAG00000016670	SRBD1	97	54.498	Fukomys_damarensis
ENSFHEG00000019480	si:ch211-117n7.8	82	59.742	ENSGALG00000009990	SRBD1	99	52.834	Gallus_gallus
ENSFHEG00000019480	si:ch211-117n7.8	100	84.706	ENSGAFG00000019664	si:ch211-117n7.8	100	84.804	Gambusia_affinis
ENSFHEG00000019480	si:ch211-117n7.8	61	81.620	ENSGACG00000010794	si:ch211-117n7.8	100	81.931	Gasterosteus_aculeatus
ENSFHEG00000019480	si:ch211-117n7.8	82	58.726	ENSGAGG00000006166	SRBD1	99	58.726	Gopherus_agassizii
ENSFHEG00000019480	si:ch211-117n7.8	93	53.202	ENSGGOG00000005910	SRBD1	98	53.202	Gorilla_gorilla
ENSFHEG00000019480	si:ch211-117n7.8	97	65.996	ENSHBUG00000013207	si:ch211-117n7.8	100	66.700	Haplochromis_burtoni
ENSFHEG00000019480	si:ch211-117n7.8	92	54.498	ENSHGLG00000018153	-	96	54.498	Heterocephalus_glaber_female
ENSFHEG00000019480	si:ch211-117n7.8	92	54.393	ENSHGLG00100015183	-	96	54.393	Heterocephalus_glaber_male
ENSFHEG00000019480	si:ch211-117n7.8	85	68.851	ENSIPUG00000009661	srbd1	100	63.539	Ictalurus_punctatus
ENSFHEG00000019480	si:ch211-117n7.8	85	57.583	ENSSTOG00000005898	SRBD1	88	57.466	Ictidomys_tridecemlineatus
ENSFHEG00000019480	si:ch211-117n7.8	93	52.017	ENSJJAG00000022244	Srbd1	95	52.017	Jaculus_jaculus
ENSFHEG00000019480	si:ch211-117n7.8	99	82.434	ENSKMAG00000003473	si:ch211-117n7.8	100	82.434	Kryptolebias_marmoratus
ENSFHEG00000019480	si:ch211-117n7.8	100	78.431	ENSLBEG00000027518	si:ch211-117n7.8	100	78.431	Labrus_bergylta
ENSFHEG00000019480	si:ch211-117n7.8	82	58.775	ENSLACG00000009790	SRBD1	98	58.775	Latimeria_chalumnae
ENSFHEG00000019480	si:ch211-117n7.8	92	62.231	ENSLOCG00000016360	si:ch211-117n7.8	96	62.231	Lepisosteus_oculatus
ENSFHEG00000019480	si:ch211-117n7.8	93	52.784	ENSMFAG00000042026	SRBD1	95	52.784	Macaca_fascicularis
ENSFHEG00000019480	si:ch211-117n7.8	82	57.547	ENSMMUG00000003490	SRBD1	98	51.680	Macaca_mulatta
ENSFHEG00000019480	si:ch211-117n7.8	93	51.134	ENSMNEG00000034701	SRBD1	95	51.134	Macaca_nemestrina
ENSFHEG00000019480	si:ch211-117n7.8	93	52.887	ENSMLEG00000000745	SRBD1	95	52.887	Mandrillus_leucophaeus
ENSFHEG00000019480	si:ch211-117n7.8	100	76.976	ENSMAMG00000021921	si:ch211-117n7.8	100	77.073	Mastacembelus_armatus
ENSFHEG00000019480	si:ch211-117n7.8	100	80.195	ENSMZEG00005027369	si:ch211-117n7.8	100	80.780	Maylandia_zebra
ENSFHEG00000019480	si:ch211-117n7.8	78	57.284	ENSMGAG00000010273	SRBD1	99	57.284	Meleagris_gallopavo
ENSFHEG00000019480	si:ch211-117n7.8	76	57.726	ENSMAUG00000013916	Srbd1	95	57.726	Mesocricetus_auratus
ENSFHEG00000019480	si:ch211-117n7.8	93	53.664	ENSMICG00000007835	SRBD1	95	53.664	Microcebus_murinus
ENSFHEG00000019480	si:ch211-117n7.8	83	57.479	ENSMOCG00000018716	Srbd1	85	57.479	Microtus_ochrogaster
ENSFHEG00000019480	si:ch211-117n7.8	97	74.722	ENSMMOG00000007507	si:ch211-117n7.8	100	74.722	Mola_mola
ENSFHEG00000019480	si:ch211-117n7.8	100	76.608	ENSMALG00000001562	si:ch211-117n7.8	100	76.803	Monopterus_albus
ENSFHEG00000019480	si:ch211-117n7.8	82	57.788	MGP_CAROLIEiJ_G0021934	Srbd1	99	59.211	Mus_caroli
ENSFHEG00000019480	si:ch211-117n7.8	82	57.788	ENSMUSG00000024135	Srbd1	100	55.903	Mus_musculus
ENSFHEG00000019480	si:ch211-117n7.8	82	57.414	MGP_PahariEiJ_G0020924	Srbd1	84	57.414	Mus_pahari
ENSFHEG00000019480	si:ch211-117n7.8	82	57.788	MGP_SPRETEiJ_G0022850	Srbd1	84	57.788	Mus_spretus
ENSFHEG00000019480	si:ch211-117n7.8	82	57.814	ENSMLUG00000007039	SRBD1	84	57.814	Myotis_lucifugus
ENSFHEG00000019480	si:ch211-117n7.8	82	56.422	ENSNGAG00000011893	Srbd1	84	56.422	Nannospalax_galili
ENSFHEG00000019480	si:ch211-117n7.8	98	75.549	ENSNBRG00000012873	si:ch211-117n7.8	100	76.148	Neolamprologus_brichardi
ENSFHEG00000019480	si:ch211-117n7.8	85	55.932	ENSNLEG00000016877	SRBD1	87	55.932	Nomascus_leucogenys
ENSFHEG00000019480	si:ch211-117n7.8	82	58.095	ENSODEG00000012095	SRBD1	85	58.095	Octodon_degus
ENSFHEG00000019480	si:ch211-117n7.8	100	79.961	ENSONIG00000000945	si:ch211-117n7.8	100	84.706	Oreochromis_niloticus
ENSFHEG00000019480	si:ch211-117n7.8	94	53.141	ENSOCUG00000015385	SRBD1	96	53.141	Oryctolagus_cuniculus
ENSFHEG00000019480	si:ch211-117n7.8	100	72.710	ENSORLG00000004427	si:ch211-117n7.8	100	72.710	Oryzias_latipes
ENSFHEG00000019480	si:ch211-117n7.8	100	75.875	ENSORLG00020012792	si:ch211-117n7.8	100	75.875	Oryzias_latipes_hni
ENSFHEG00000019480	si:ch211-117n7.8	100	75.634	ENSORLG00015018598	si:ch211-117n7.8	100	75.634	Oryzias_latipes_hsok
ENSFHEG00000019480	si:ch211-117n7.8	99	73.772	ENSOMEG00000012229	si:ch211-117n7.8	99	76.894	Oryzias_melastigma
ENSFHEG00000019480	si:ch211-117n7.8	82	55.595	ENSOGAG00000001076	SRBD1	84	55.595	Otolemur_garnettii
ENSFHEG00000019480	si:ch211-117n7.8	82	53.846	ENSOARG00000005958	SRBD1	84	53.846	Ovis_aries
ENSFHEG00000019480	si:ch211-117n7.8	82	57.547	ENSPPAG00000038442	SRBD1	95	52.941	Pan_paniscus
ENSFHEG00000019480	si:ch211-117n7.8	93	52.911	ENSPPRG00000003449	SRBD1	96	52.911	Panthera_pardus
ENSFHEG00000019480	si:ch211-117n7.8	93	52.911	ENSPTIG00000012495	SRBD1	96	52.911	Panthera_tigris_altaica
ENSFHEG00000019480	si:ch211-117n7.8	82	57.783	ENSPTRG00000011889	SRBD1	95	53.148	Pan_troglodytes
ENSFHEG00000019480	si:ch211-117n7.8	93	52.680	ENSPANG00000008063	SRBD1	95	52.680	Papio_anubis
ENSFHEG00000019480	si:ch211-117n7.8	94	63.412	ENSPKIG00000021973	si:ch211-117n7.8	99	60.962	Paramormyrops_kingsleyae
ENSFHEG00000019480	si:ch211-117n7.8	82	58.726	ENSPSIG00000008992	SRBD1	96	54.318	Pelodiscus_sinensis
ENSFHEG00000019480	si:ch211-117n7.8	83	79.157	ENSPMGG00000013348	si:ch211-117n7.8	99	72.362	Periophthalmus_magnuspinnatus
ENSFHEG00000019480	si:ch211-117n7.8	82	56.547	ENSPEMG00000020684	Srbd1	84	56.547	Peromyscus_maniculatus_bairdii
ENSFHEG00000019480	si:ch211-117n7.8	100	85.294	ENSPFOG00000010650	si:ch211-117n7.8	100	85.294	Poecilia_formosa
ENSFHEG00000019480	si:ch211-117n7.8	100	85.392	ENSPLAG00000002141	si:ch211-117n7.8	100	85.392	Poecilia_latipinna
ENSFHEG00000019480	si:ch211-117n7.8	100	85.392	ENSPMEG00000018537	si:ch211-117n7.8	100	85.392	Poecilia_mexicana
ENSFHEG00000019480	si:ch211-117n7.8	100	81.845	ENSPREG00000003258	si:ch211-117n7.8	100	81.845	Poecilia_reticulata
ENSFHEG00000019480	si:ch211-117n7.8	82	53.634	ENSPPYG00000012444	SRBD1	83	53.524	Pongo_abelii
ENSFHEG00000019480	si:ch211-117n7.8	75	52.618	ENSPCAG00000005629	SRBD1	80	52.618	Procavia_capensis
ENSFHEG00000019480	si:ch211-117n7.8	93	45.231	ENSPCOG00000017669	SRBD1	95	45.389	Propithecus_coquereli
ENSFHEG00000019480	si:ch211-117n7.8	82	50.943	ENSPVAG00000001782	SRBD1	84	50.943	Pteropus_vampyrus
ENSFHEG00000019480	si:ch211-117n7.8	97	74.018	ENSPNYG00000000508	si:ch211-117n7.8	100	74.119	Pundamilia_nyererei
ENSFHEG00000019480	si:ch211-117n7.8	93	66.456	ENSPNAG00000013492	SRBD1	100	63.743	Pygocentrus_nattereri
ENSFHEG00000019480	si:ch211-117n7.8	82	57.211	ENSRNOG00000014720	Srbd1	83	57.058	Rattus_norvegicus
ENSFHEG00000019480	si:ch211-117n7.8	93	52.680	ENSRBIG00000033486	SRBD1	96	52.680	Rhinopithecus_bieti
ENSFHEG00000019480	si:ch211-117n7.8	93	52.680	ENSRROG00000041599	SRBD1	96	52.680	Rhinopithecus_roxellana
ENSFHEG00000019480	si:ch211-117n7.8	83	57.293	ENSSBOG00000024982	SRBD1	84	57.293	Saimiri_boliviensis_boliviensis
ENSFHEG00000019480	si:ch211-117n7.8	96	60.830	ENSSFOG00015001128	si:ch211-117n7.8	99	60.830	Scleropages_formosus
ENSFHEG00000019480	si:ch211-117n7.8	100	77.680	ENSSMAG00000018256	si:ch211-117n7.8	100	77.680	Scophthalmus_maximus
ENSFHEG00000019480	si:ch211-117n7.8	93	80.041	ENSSLDG00000023189	si:ch211-117n7.8	99	79.307	Seriola_lalandi_dorsalis
ENSFHEG00000019480	si:ch211-117n7.8	93	50.208	ENSSARG00000009740	SRBD1	95	50.469	Sorex_araneus
ENSFHEG00000019480	si:ch211-117n7.8	83	59.507	ENSSPUG00000010475	SRBD1	94	59.507	Sphenodon_punctatus
ENSFHEG00000019480	si:ch211-117n7.8	92	77.340	ENSSPAG00000008092	-	100	75.000	Stegastes_partitus
ENSFHEG00000019480	si:ch211-117n7.8	82	58.099	ENSSSCG00000008445	SRBD1	96	52.118	Sus_scrofa
ENSFHEG00000019480	si:ch211-117n7.8	82	58.137	ENSTGUG00000003878	SRBD1	100	58.137	Taeniopygia_guttata
ENSFHEG00000019480	si:ch211-117n7.8	99	72.957	ENSTRUG00000007080	si:ch211-117n7.8	99	77.740	Takifugu_rubripes
ENSFHEG00000019480	si:ch211-117n7.8	97	72.178	ENSTNIG00000007464	si:ch211-117n7.8	98	72.178	Tetraodon_nigroviridis
ENSFHEG00000019480	si:ch211-117n7.8	65	79.787	ENSTBEG00000004556	SRBD1	65	79.787	Tupaia_belangeri
ENSFHEG00000019480	si:ch211-117n7.8	75	58.844	ENSTTRG00000011871	SRBD1	75	58.844	Tursiops_truncatus
ENSFHEG00000019480	si:ch211-117n7.8	82	58.068	ENSUAMG00000008126	SRBD1	97	55.435	Ursus_americanus
ENSFHEG00000019480	si:ch211-117n7.8	82	58.068	ENSUMAG00000012902	SRBD1	83	58.068	Ursus_maritimus
ENSFHEG00000019480	si:ch211-117n7.8	82	57.783	ENSVPAG00000006825	SRBD1	92	57.783	Vicugna_pacos
ENSFHEG00000019480	si:ch211-117n7.8	92	53.080	ENSVVUG00000005389	SRBD1	96	53.080	Vulpes_vulpes
ENSFHEG00000019480	si:ch211-117n7.8	98	44.890	ENSXETG00000002760	srbd1	98	45.152	Xenopus_tropicalis
ENSFHEG00000019480	si:ch211-117n7.8	100	85.000	ENSXMAG00000016861	si:ch211-117n7.8	100	85.000	Xiphophorus_maculatus