EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000019518 (Gene tree)
Gene ID: 105933130
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 17839 bases
Position: chrKN811401.1:149378-167216
Accession: 105933130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000017763	POP1	PF06978.11	2.3e-37	1	2
ENSFHEP00000017763	POP1	PF06978.11	2.3e-37	2	2
ENSFHEP00000017763	POPLD	PF08170.12	1.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000026547	-	3356	XM_012872530	ENSFHEP00000017763	968 (aa)	XP_012727984	UPI000644B012

Gene Model

Click here to download ENSFHEG00000019518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000019518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000019518	pop1	100	47.474	ENSG00000104356	POP1	100	47.188	Homo_sapiens
ENSFHEG00000019518	pop1	100	75.862	ENSAPOG00000008198	pop1	100	75.862	Acanthochromis_polyacanthus
ENSFHEG00000019518	pop1	100	46.080	ENSAMEG00000000556	POP1	100	45.698	Ailuropoda_melanoleuca
ENSFHEG00000019518	pop1	100	69.043	ENSACIG00000004169	POP1	100	68.941	Amphilophus_citrinellus
ENSFHEG00000019518	pop1	100	75.431	ENSAOCG00000010991	pop1	100	75.431	Amphiprion_ocellaris
ENSFHEG00000019518	pop1	100	69.899	ENSAPEG00000007607	pop1	100	69.899	Amphiprion_percula
ENSFHEG00000019518	pop1	100	71.689	ENSATEG00000024814	POP1	100	72.194	Anabas_testudineus
ENSFHEG00000019518	pop1	95	49.220	ENSAPLG00000014418	POP1	99	48.907	Anas_platyrhynchos
ENSFHEG00000019518	pop1	100	46.540	ENSACAG00000016083	POP1	100	46.161	Anolis_carolinensis
ENSFHEG00000019518	pop1	88	53.593	ENSANAG00000026360	POP1	90	53.593	Aotus_nancymaae
ENSFHEG00000019518	pop1	100	71.903	ENSACLG00000010951	pop1	100	72.205	Astatotilapia_calliptera
ENSFHEG00000019518	pop1	100	57.833	ENSAMXG00000014483	POP1	100	57.438	Astyanax_mexicanus
ENSFHEG00000019518	pop1	100	47.368	ENSBTAG00000012596	POP1	93	51.507	Bos_taurus
ENSFHEG00000019518	pop1	60	31.128	WBGene00015486	C05D11.9	65	31.128	Caenorhabditis_elegans
ENSFHEG00000019518	pop1	100	47.206	ENSCJAG00000015567	POP1	91	52.566	Callithrix_jacchus
ENSFHEG00000019518	pop1	100	47.882	ENSCAFG00000000469	POP1	100	47.633	Canis_familiaris
ENSFHEG00000019518	pop1	100	46.878	ENSCAFG00020026765	POP1	100	46.442	Canis_lupus_dingo
ENSFHEG00000019518	pop1	94	51.370	ENSCHIG00000017066	POP1	94	51.370	Capra_hircus
ENSFHEG00000019518	pop1	100	46.565	ENSTSYG00000003097	POP1	100	46.958	Carlito_syrichta
ENSFHEG00000019518	pop1	100	45.195	ENSCAPG00000007251	POP1	100	45.351	Cavia_aperea
ENSFHEG00000019518	pop1	100	46.183	ENSCPOG00000002901	POP1	100	46.337	Cavia_porcellus
ENSFHEG00000019518	pop1	100	47.099	ENSCCAG00000018939	POP1	91	52.235	Cebus_capucinus
ENSFHEG00000019518	pop1	100	46.227	ENSCATG00000040916	POP1	100	46.806	Cercocebus_atys
ENSFHEG00000019518	pop1	100	46.833	ENSCLAG00000007208	POP1	97	46.545	Chinchilla_lanigera
ENSFHEG00000019518	pop1	92	48.889	ENSCSAG00000012340	POP1	99	48.995	Chlorocebus_sabaeus
ENSFHEG00000019518	pop1	95	46.281	ENSCHOG00000011432	POP1	88	50.847	Choloepus_hoffmanni
ENSFHEG00000019518	pop1	100	49.612	ENSCPBG00000006373	POP1	100	49.371	Chrysemys_picta_bellii
ENSFHEG00000019518	pop1	84	36.047	ENSCING00000008323	-	87	36.032	Ciona_intestinalis
ENSFHEG00000019518	pop1	100	46.080	ENSCANG00000001647	POP1	91	50.894	Colobus_angolensis_palliatus
ENSFHEG00000019518	pop1	100	46.191	ENSCGRG00001017308	Pop1	100	46.154	Cricetulus_griseus_chok1gshd
ENSFHEG00000019518	pop1	100	44.091	ENSCGRG00000010824	Pop1	100	44.324	Cricetulus_griseus_crigri
ENSFHEG00000019518	pop1	100	69.301	ENSCSEG00000008737	POP1	100	69.301	Cynoglossus_semilaevis
ENSFHEG00000019518	pop1	100	81.436	ENSCVAG00000022248	pop1	100	80.923	Cyprinodon_variegatus
ENSFHEG00000019518	pop1	52	55.315	ENSDARG00000102087	pop1	99	54.921	Danio_rerio
ENSFHEG00000019518	pop1	100	44.126	ENSDNOG00000019974	POP1	100	43.911	Dasypus_novemcinctus
ENSFHEG00000019518	pop1	100	42.545	ENSDORG00000015384	Pop1	100	42.459	Dipodomys_ordii
ENSFHEG00000019518	pop1	88	47.834	ENSETEG00000007839	POP1	88	47.834	Echinops_telfairi
ENSFHEG00000019518	pop1	100	47.368	ENSEASG00005003189	POP1	98	47.081	Equus_asinus_asinus
ENSFHEG00000019518	pop1	100	47.560	ENSECAG00000024236	POP1	100	47.177	Equus_caballus
ENSFHEG00000019518	pop1	51	75.325	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSFHEG00000019518	pop1	100	61.982	ENSELUG00000003526	pop1	100	62.083	Esox_lucius
ENSFHEG00000019518	pop1	100	46.788	ENSFCAG00000002168	POP1	100	46.405	Felis_catus
ENSFHEG00000019518	pop1	100	46.590	ENSFALG00000005711	POP1	100	47.313	Ficedula_albicollis
ENSFHEG00000019518	pop1	100	46.264	ENSFDAG00000017068	POP1	100	45.793	Fukomys_damarensis
ENSFHEG00000019518	pop1	100	62.385	ENSGMOG00000000659	POP1	100	62.118	Gadus_morhua
ENSFHEG00000019518	pop1	100	77.073	ENSGAFG00000019770	POP1	100	77.073	Gambusia_affinis
ENSFHEG00000019518	pop1	100	64.107	ENSGACG00000003499	pop1	100	64.107	Gasterosteus_aculeatus
ENSFHEG00000019518	pop1	100	48.256	ENSGAGG00000011737	POP1	98	48.170	Gopherus_agassizii
ENSFHEG00000019518	pop1	100	47.474	ENSGGOG00000003176	POP1	100	47.092	Gorilla_gorilla
ENSFHEG00000019518	pop1	100	71.903	ENSHBUG00000021583	pop1	100	71.903	Haplochromis_burtoni
ENSFHEG00000019518	pop1	100	46.183	ENSHGLG00000006029	POP1	100	46.183	Heterocephalus_glaber_female
ENSFHEG00000019518	pop1	100	46.183	ENSHGLG00100016879	POP1	100	46.183	Heterocephalus_glaber_male
ENSFHEG00000019518	pop1	100	62.948	ENSHCOG00000013888	pop1	100	62.673	Hippocampus_comes
ENSFHEG00000019518	pop1	99	55.457	ENSIPUG00000018336	pop1	99	55.457	Ictalurus_punctatus
ENSFHEG00000019518	pop1	100	45.900	ENSSTOG00000011455	POP1	97	45.617	Ictidomys_tridecemlineatus
ENSFHEG00000019518	pop1	100	46.282	ENSJJAG00000013325	Pop1	100	46.086	Jaculus_jaculus
ENSFHEG00000019518	pop1	100	75.590	ENSKMAG00000001346	POP1	100	75.487	Kryptolebias_marmoratus
ENSFHEG00000019518	pop1	100	65.982	ENSLBEG00000024457	POP1	100	65.879	Labrus_bergylta
ENSFHEG00000019518	pop1	94	50.877	ENSLACG00000012498	POP1	98	50.980	Latimeria_chalumnae
ENSFHEG00000019518	pop1	100	55.458	ENSLOCG00000009817	POP1	100	55.340	Lepisosteus_oculatus
ENSFHEG00000019518	pop1	100	48.092	ENSLAFG00000010770	POP1	100	48.061	Loxodonta_africana
ENSFHEG00000019518	pop1	100	46.227	ENSMFAG00000000347	POP1	100	46.711	Macaca_fascicularis
ENSFHEG00000019518	pop1	100	45.889	ENSMNEG00000036870	POP1	100	46.176	Macaca_nemestrina
ENSFHEG00000019518	pop1	100	46.425	ENSMLEG00000034986	POP1	100	46.806	Mandrillus_leucophaeus
ENSFHEG00000019518	pop1	100	71.645	ENSMAMG00000004040	pop1	100	71.645	Mastacembelus_armatus
ENSFHEG00000019518	pop1	100	72.105	ENSMZEG00005025448	pop1	100	72.105	Maylandia_zebra
ENSFHEG00000019518	pop1	100	46.277	ENSMGAG00000012167	POP1	100	46.523	Meleagris_gallopavo
ENSFHEG00000019518	pop1	100	46.577	ENSMAUG00000017537	Pop1	100	46.191	Mesocricetus_auratus
ENSFHEG00000019518	pop1	100	46.183	ENSMICG00000004361	POP1	100	46.279	Microcebus_murinus
ENSFHEG00000019518	pop1	100	46.249	ENSMOCG00000006356	Pop1	100	46.030	Microtus_ochrogaster
ENSFHEG00000019518	pop1	100	64.779	ENSMMOG00000018242	pop1	100	64.161	Mola_mola
ENSFHEG00000019518	pop1	100	46.066	ENSMODG00000006561	POP1	92	50.475	Monodelphis_domestica
ENSFHEG00000019518	pop1	100	70.415	ENSMALG00000012621	POP1	100	70.314	Monopterus_albus
ENSFHEG00000019518	pop1	100	45.829	MGP_CAROLIEiJ_G0019726	Pop1	100	45.881	Mus_caroli
ENSFHEG00000019518	pop1	100	45.359	ENSMUSG00000022325	Pop1	100	45.115	Mus_musculus
ENSFHEG00000019518	pop1	100	45.217	MGP_PahariEiJ_G0019735	Pop1	100	45.174	Mus_pahari
ENSFHEG00000019518	pop1	100	45.359	MGP_SPRETEiJ_G0020622	Pop1	100	45.220	Mus_spretus
ENSFHEG00000019518	pop1	100	46.705	ENSMPUG00000015250	POP1	92	51.090	Mustela_putorius_furo
ENSFHEG00000019518	pop1	100	45.793	ENSMLUG00000010204	POP1	100	45.411	Myotis_lucifugus
ENSFHEG00000019518	pop1	100	46.323	ENSNGAG00000001582	Pop1	94	50.959	Nannospalax_galili
ENSFHEG00000019518	pop1	100	67.623	ENSNBRG00000002356	pop1	100	67.418	Neolamprologus_brichardi
ENSFHEG00000019518	pop1	100	47.087	ENSNLEG00000002541	POP1	100	47.378	Nomascus_leucogenys
ENSFHEG00000019518	pop1	92	45.641	ENSMEUG00000003118	POP1	91	44.349	Notamacropus_eugenii
ENSFHEG00000019518	pop1	100	46.287	ENSOPRG00000007667	POP1	100	46.287	Ochotona_princeps
ENSFHEG00000019518	pop1	100	46.323	ENSODEG00000003984	POP1	92	50.887	Octodon_degus
ENSFHEG00000019518	pop1	100	72.709	ENSONIG00000016445	pop1	100	72.910	Oreochromis_niloticus
ENSFHEG00000019518	pop1	60	44.639	ENSOANG00000001278	-	94	44.639	Ornithorhynchus_anatinus
ENSFHEG00000019518	pop1	100	45.774	ENSOCUG00000017400	POP1	92	50.341	Oryctolagus_cuniculus
ENSFHEG00000019518	pop1	100	70.842	ENSORLG00000002839	pop1	100	70.868	Oryzias_latipes
ENSFHEG00000019518	pop1	100	64.935	ENSORLG00020022450	POP1	100	64.635	Oryzias_latipes_hni
ENSFHEG00000019518	pop1	100	71.561	ENSORLG00015012746	POP1	100	71.253	Oryzias_latipes_hsok
ENSFHEG00000019518	pop1	100	68.994	ENSOMEG00000006915	pop1	99	68.891	Oryzias_melastigma
ENSFHEG00000019518	pop1	100	45.663	ENSOGAG00000001466	POP1	100	45.758	Otolemur_garnettii
ENSFHEG00000019518	pop1	100	47.569	ENSPPAG00000018410	POP1	100	47.283	Pan_paniscus
ENSFHEG00000019518	pop1	100	46.699	ENSPPRG00000005002	POP1	100	46.316	Panthera_pardus
ENSFHEG00000019518	pop1	100	46.794	ENSPTIG00000016527	POP1	100	46.316	Panthera_tigris_altaica
ENSFHEG00000019518	pop1	100	47.474	ENSPTRG00000020458	POP1	91	51.511	Pan_troglodytes
ENSFHEG00000019518	pop1	100	46.520	ENSPANG00000009704	POP1	100	46.902	Papio_anubis
ENSFHEG00000019518	pop1	100	57.958	ENSPKIG00000016325	POP1	100	57.958	Paramormyrops_kingsleyae
ENSFHEG00000019518	pop1	100	47.981	ENSPSIG00000012343	POP1	100	48.365	Pelodiscus_sinensis
ENSFHEG00000019518	pop1	100	61.762	ENSPMGG00000022253	POP1	100	61.194	Periophthalmus_magnuspinnatus
ENSFHEG00000019518	pop1	99	45.644	ENSPEMG00000023633	Pop1	100	45.644	Peromyscus_maniculatus_bairdii
ENSFHEG00000019518	pop1	92	42.947	ENSPMAG00000003209	POP1	99	42.977	Petromyzon_marinus
ENSFHEG00000019518	pop1	100	45.523	ENSPCIG00000012216	POP1	100	45.472	Phascolarctos_cinereus
ENSFHEG00000019518	pop1	100	78.016	ENSPFOG00000012490	POP1	100	78.016	Poecilia_formosa
ENSFHEG00000019518	pop1	100	77.607	ENSPLAG00000004646	POP1	100	77.607	Poecilia_latipinna
ENSFHEG00000019518	pop1	100	78.119	ENSPMEG00000019592	POP1	100	78.119	Poecilia_mexicana
ENSFHEG00000019518	pop1	100	77.653	ENSPREG00000020951	POP1	100	77.653	Poecilia_reticulata
ENSFHEG00000019518	pop1	100	47.433	ENSPPYG00000018777	POP1	100	47.092	Pongo_abelii
ENSFHEG00000019518	pop1	100	45.507	ENSPCAG00000016662	POP1	100	45.845	Procavia_capensis
ENSFHEG00000019518	pop1	100	45.941	ENSPCOG00000019420	POP1	100	46.132	Propithecus_coquereli
ENSFHEG00000019518	pop1	100	45.962	ENSPVAG00000014468	POP1	100	46.391	Pteropus_vampyrus
ENSFHEG00000019518	pop1	100	68.583	ENSPNYG00000004476	pop1	100	68.923	Pundamilia_nyererei
ENSFHEG00000019518	pop1	100	56.539	ENSPNAG00000000265	pop1	100	56.441	Pygocentrus_nattereri
ENSFHEG00000019518	pop1	100	45.717	ENSRNOG00000005243	Pop1	100	45.673	Rattus_norvegicus
ENSFHEG00000019518	pop1	100	46.323	ENSRBIG00000007996	POP1	91	51.511	Rhinopithecus_bieti
ENSFHEG00000019518	pop1	100	46.323	ENSRROG00000012334	POP1	91	51.511	Rhinopithecus_roxellana
ENSFHEG00000019518	pop1	96	47.915	ENSSBOG00000020830	POP1	94	47.508	Saimiri_boliviensis_boliviensis
ENSFHEG00000019518	pop1	100	45.841	ENSSHAG00000000296	POP1	100	45.936	Sarcophilus_harrisii
ENSFHEG00000019518	pop1	100	59.454	ENSSFOG00015007429	pop1	99	59.252	Scleropages_formosus
ENSFHEG00000019518	pop1	100	68.480	ENSSMAG00000010467	POP1	100	69.302	Scophthalmus_maximus
ENSFHEG00000019518	pop1	100	72.700	ENSSDUG00000007817	POP1	100	73.500	Seriola_dumerili
ENSFHEG00000019518	pop1	100	73.843	ENSSLDG00000012565	POP1	100	73.843	Seriola_lalandi_dorsalis
ENSFHEG00000019518	pop1	100	45.902	ENSSPUG00000003550	-	100	45.902	Sphenodon_punctatus
ENSFHEG00000019518	pop1	100	70.821	ENSSPAG00000014955	pop1	100	70.517	Stegastes_partitus
ENSFHEG00000019518	pop1	100	46.449	ENSSSCG00000006078	POP1	100	46.065	Sus_scrofa
ENSFHEG00000019518	pop1	95	44.317	ENSTGUG00000012011	-	100	44.213	Taeniopygia_guttata
ENSFHEG00000019518	pop1	100	66.633	ENSTRUG00000010856	pop1	100	66.531	Takifugu_rubripes
ENSFHEG00000019518	pop1	96	67.248	ENSTNIG00000013297	pop1	100	67.146	Tetraodon_nigroviridis
ENSFHEG00000019518	pop1	95	45.747	ENSTBEG00000014214	POP1	87	50.850	Tupaia_belangeri
ENSFHEG00000019518	pop1	100	46.367	ENSTTRG00000016071	POP1	100	46.418	Tursiops_truncatus
ENSFHEG00000019518	pop1	99	47.766	ENSUAMG00000017309	POP1	100	47.269	Ursus_americanus
ENSFHEG00000019518	pop1	100	46.756	ENSUMAG00000016952	POP1	100	50.752	Ursus_maritimus
ENSFHEG00000019518	pop1	86	51.786	ENSVPAG00000008278	POP1	82	52.158	Vicugna_pacos
ENSFHEG00000019518	pop1	100	47.132	ENSVVUG00000010994	POP1	100	46.782	Vulpes_vulpes
ENSFHEG00000019518	pop1	100	68.154	ENSXCOG00000017043	POP1	100	67.951	Xiphophorus_couchianus
ENSFHEG00000019518	pop1	100	76.994	ENSXMAG00000002472	POP1	100	76.994	Xiphophorus_maculatus