EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000019604 (Gene tree)
Gene ID: 105927967
Gene Symbol: lrpprc
Alias: fc13c04|im:7150924|im:7151572|wu:fc13c04|wu:fj38h02
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 79100 bases
Position: chrKN811316.1:1880676-1959775
Accession: 105927967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000017838	PPR	PF01535.20	3.8e-39	1	7
ENSFHEP00000017838	PPR	PF01535.20	3.8e-39	2	7
ENSFHEP00000017838	PPR	PF01535.20	3.8e-39	3	7
ENSFHEP00000017838	PPR	PF01535.20	3.8e-39	4	7
ENSFHEP00000017838	PPR	PF01535.20	3.8e-39	5	7
ENSFHEP00000017838	PPR	PF01535.20	3.8e-39	6	7
ENSFHEP00000017838	PPR	PF01535.20	3.8e-39	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000026640	-	6243	XM_012864998	ENSFHEP00000017838	1421 (aa)	XP_012720452	UPI000644F2B3

Gene Model

Click here to download ENSFHEG00000019604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000019604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000019604	lrpprc	100	75.473	ENSAPOG00000016610	lrpprc	100	75.473	Acanthochromis_polyacanthus
ENSFHEG00000019604	lrpprc	97	50.937	ENSAMEG00000005852	LRPPRC	100	50.937	Ailuropoda_melanoleuca
ENSFHEG00000019604	lrpprc	100	73.366	ENSACIG00000009604	lrpprc	99	73.366	Amphilophus_citrinellus
ENSFHEG00000019604	lrpprc	100	76.746	ENSAOCG00000005886	lrpprc	100	76.713	Amphiprion_ocellaris
ENSFHEG00000019604	lrpprc	100	72.296	ENSAPEG00000002937	lrpprc	98	72.327	Amphiprion_percula
ENSFHEG00000019604	lrpprc	100	72.157	ENSATEG00000010555	lrpprc	100	72.157	Anabas_testudineus
ENSFHEG00000019604	lrpprc	94	55.662	ENSACAG00000029278	LRPPRC	99	54.024	Anolis_carolinensis
ENSFHEG00000019604	lrpprc	99	50.352	ENSANAG00000027440	LRPPRC	95	56.084	Aotus_nancymaae
ENSFHEG00000019604	lrpprc	96	71.720	ENSACLG00000023712	lrpprc	92	79.493	Astatotilapia_calliptera
ENSFHEG00000019604	lrpprc	95	50.847	ENSCJAG00000000794	LRPPRC	96	50.993	Callithrix_jacchus
ENSFHEG00000019604	lrpprc	97	50.972	ENSCHIG00000020173	LRPPRC	99	50.669	Capra_hircus
ENSFHEG00000019604	lrpprc	94	39.543	ENSCAPG00000013631	LRPPRC	98	39.543	Cavia_aperea
ENSFHEG00000019604	lrpprc	85	50.000	ENSCPOG00000000204	LRPPRC	99	50.000	Cavia_porcellus
ENSFHEG00000019604	lrpprc	99	50.141	ENSCCAG00000031900	LRPPRC	97	55.472	Cebus_capucinus
ENSFHEG00000019604	lrpprc	99	49.859	ENSCATG00000014187	LRPPRC	97	55.367	Cercocebus_atys
ENSFHEG00000019604	lrpprc	99	49.263	ENSCLAG00000005203	LRPPRC	99	49.263	Chinchilla_lanigera
ENSFHEG00000019604	lrpprc	99	50.035	ENSCSAG00000013233	LRPPRC	99	50.140	Chlorocebus_sabaeus
ENSFHEG00000019604	lrpprc	84	49.612	ENSCHOG00000003631	LRPPRC	84	49.612	Choloepus_hoffmanni
ENSFHEG00000019604	lrpprc	94	49.406	ENSCANG00000034961	LRPPRC	99	60.289	Colobus_angolensis_palliatus
ENSFHEG00000019604	lrpprc	99	49.472	ENSCGRG00001016261	Lrpprc	99	49.578	Cricetulus_griseus_chok1gshd
ENSFHEG00000019604	lrpprc	99	49.472	ENSCGRG00000004072	Lrpprc	99	49.578	Cricetulus_griseus_crigri
ENSFHEG00000019604	lrpprc	99	52.228	ENSCSEG00000003850	lrpprc	96	58.203	Cynoglossus_semilaevis
ENSFHEG00000019604	lrpprc	100	85.785	ENSCVAG00000012967	lrpprc	100	85.785	Cyprinodon_variegatus
ENSFHEG00000019604	lrpprc	99	57.778	ENSDARG00000043970	lrpprc	98	57.778	Danio_rerio
ENSFHEG00000019604	lrpprc	99	50.211	ENSDNOG00000012594	-	99	50.492	Dasypus_novemcinctus
ENSFHEG00000019604	lrpprc	77	42.520	ENSDNOG00000032336	-	95	42.520	Dasypus_novemcinctus
ENSFHEG00000019604	lrpprc	96	51.092	ENSDORG00000012233	Lrpprc	99	50.563	Dipodomys_ordii
ENSFHEG00000019604	lrpprc	99	50.633	ENSETEG00000006657	LRPPRC	99	50.633	Echinops_telfairi
ENSFHEG00000019604	lrpprc	72	56.608	ENSEEUG00000012340	LRPPRC	79	56.608	Erinaceus_europaeus
ENSFHEG00000019604	lrpprc	95	58.613	ENSELUG00000012803	lrpprc	99	58.613	Esox_lucius
ENSFHEG00000019604	lrpprc	99	51.517	ENSFCAG00000013468	LRPPRC	99	51.690	Felis_catus
ENSFHEG00000019604	lrpprc	94	50.336	ENSFALG00000012738	LRPPRC	98	50.336	Ficedula_albicollis
ENSFHEG00000019604	lrpprc	99	49.196	ENSFDAG00000015328	LRPPRC	99	49.196	Fukomys_damarensis
ENSFHEG00000019604	lrpprc	99	62.120	ENSGMOG00000008337	lrpprc	99	62.120	Gadus_morhua
ENSFHEG00000019604	lrpprc	99	79.689	ENSGAFG00000001455	lrpprc	99	79.689	Gambusia_affinis
ENSFHEG00000019604	lrpprc	99	70.365	ENSGACG00000010679	lrpprc	99	72.640	Gasterosteus_aculeatus
ENSFHEG00000019604	lrpprc	100	78.596	ENSHBUG00000000393	lrpprc	98	78.596	Haplochromis_burtoni
ENSFHEG00000019604	lrpprc	99	48.984	ENSHGLG00000006123	LRPPRC	99	48.984	Heterocephalus_glaber_female
ENSFHEG00000019604	lrpprc	59	47.625	ENSHGLG00100005960	-	99	47.625	Heterocephalus_glaber_male
ENSFHEG00000019604	lrpprc	99	71.315	ENSHCOG00000002107	lrpprc	100	71.315	Hippocampus_comes
ENSFHEG00000019604	lrpprc	99	61.641	ENSIPUG00000009406	lrpprc	98	61.641	Ictalurus_punctatus
ENSFHEG00000019604	lrpprc	94	50.778	ENSSTOG00000011185	LRPPRC	99	49.612	Ictidomys_tridecemlineatus
ENSFHEG00000019604	lrpprc	94	50.631	ENSJJAG00000020475	Lrpprc	99	49.682	Jaculus_jaculus
ENSFHEG00000019604	lrpprc	99	66.096	ENSKMAG00000003287	lrpprc	85	66.096	Kryptolebias_marmoratus
ENSFHEG00000019604	lrpprc	100	62.465	ENSLBEG00000023225	lrpprc	96	72.179	Labrus_bergylta
ENSFHEG00000019604	lrpprc	100	56.582	ENSLACG00000014030	LRPPRC	100	56.582	Latimeria_chalumnae
ENSFHEG00000019604	lrpprc	99	61.204	ENSLOCG00000016390	lrpprc	97	61.204	Lepisosteus_oculatus
ENSFHEG00000019604	lrpprc	99	49.022	ENSLAFG00000008614	LRPPRC	99	49.055	Loxodonta_africana
ENSFHEG00000019604	lrpprc	99	50.035	ENSMFAG00000041560	LRPPRC	99	59.928	Macaca_fascicularis
ENSFHEG00000019604	lrpprc	95	50.589	ENSMMUG00000019841	LRPPRC	99	59.928	Macaca_mulatta
ENSFHEG00000019604	lrpprc	99	50.035	ENSMNEG00000031613	LRPPRC	97	55.179	Macaca_nemestrina
ENSFHEG00000019604	lrpprc	98	64.387	ENSMAMG00000021835	lrpprc	98	64.523	Mastacembelus_armatus
ENSFHEG00000019604	lrpprc	100	78.526	ENSMZEG00005027379	lrpprc	99	78.526	Maylandia_zebra
ENSFHEG00000019604	lrpprc	99	49.719	ENSMAUG00000012118	Lrpprc	99	50.260	Mesocricetus_auratus
ENSFHEG00000019604	lrpprc	99	49.965	ENSMICG00000010486	LRPPRC	97	54.664	Microcebus_murinus
ENSFHEG00000019604	lrpprc	99	50.599	ENSMOCG00000006048	Lrpprc	99	50.599	Microtus_ochrogaster
ENSFHEG00000019604	lrpprc	100	67.277	ENSMMOG00000007830	lrpprc	94	75.490	Mola_mola
ENSFHEG00000019604	lrpprc	95	51.399	ENSMODG00000000648	LRPPRC	99	51.399	Monodelphis_domestica
ENSFHEG00000019604	lrpprc	100	69.333	ENSMALG00000001271	lrpprc	99	69.333	Monopterus_albus
ENSFHEG00000019604	lrpprc	98	52.170	ENSMPUG00000011800	LRPPRC	99	52.365	Mustela_putorius_furo
ENSFHEG00000019604	lrpprc	99	50.843	ENSMLUG00000010575	LRPPRC	99	50.912	Myotis_lucifugus
ENSFHEG00000019604	lrpprc	99	49.684	ENSNGAG00000013069	Lrpprc	99	49.684	Nannospalax_galili
ENSFHEG00000019604	lrpprc	94	70.149	ENSNBRG00000013202	lrpprc	100	70.149	Neolamprologus_brichardi
ENSFHEG00000019604	lrpprc	99	49.193	ENSNLEG00000016782	LRPPRC	97	55.576	Nomascus_leucogenys
ENSFHEG00000019604	lrpprc	87	51.667	ENSOPRG00000016774	LRPPRC	89	51.667	Ochotona_princeps
ENSFHEG00000019604	lrpprc	94	50.962	ENSODEG00000011211	LRPPRC	99	49.579	Octodon_degus
ENSFHEG00000019604	lrpprc	100	78.737	ENSONIG00000000917	lrpprc	99	77.183	Oreochromis_niloticus
ENSFHEG00000019604	lrpprc	74	45.887	ENSOANG00000014670	-	100	45.887	Ornithorhynchus_anatinus
ENSFHEG00000019604	lrpprc	99	50.701	ENSOCUG00000015046	LRPPRC	96	50.771	Oryctolagus_cuniculus
ENSFHEG00000019604	lrpprc	100	71.368	ENSORLG00000004605	lrpprc	96	71.439	Oryzias_latipes
ENSFHEG00000019604	lrpprc	91	75.404	ENSORLG00020012536	lrpprc	99	75.318	Oryzias_latipes_hni
ENSFHEG00000019604	lrpprc	100	69.544	ENSORLG00015018270	lrpprc	100	69.684	Oryzias_latipes_hsok
ENSFHEG00000019604	lrpprc	95	50.583	ENSOGAG00000012798	LRPPRC	99	49.895	Otolemur_garnettii
ENSFHEG00000019604	lrpprc	95	51.803	ENSOARG00000006522	LRPPRC	99	50.774	Ovis_aries
ENSFHEG00000019604	lrpprc	99	48.702	ENSPPAG00000040876	LRPPRC	97	54.982	Pan_paniscus
ENSFHEG00000019604	lrpprc	99	51.408	ENSPPRG00000006578	LRPPRC	99	51.581	Panthera_pardus
ENSFHEG00000019604	lrpprc	95	52.616	ENSPTIG00000000933	LRPPRC	96	52.616	Panthera_tigris_altaica
ENSFHEG00000019604	lrpprc	99	49.788	ENSPTRG00000011880	LRPPRC	98	55.970	Pan_troglodytes
ENSFHEG00000019604	lrpprc	99	49.719	ENSPANG00000020731	LRPPRC	97	55.179	Papio_anubis
ENSFHEG00000019604	lrpprc	95	47.423	ENSPKIG00000022232	lrpprc	97	59.109	Paramormyrops_kingsleyae
ENSFHEG00000019604	lrpprc	61	53.432	ENSPSIG00000006830	-	99	53.432	Pelodiscus_sinensis
ENSFHEG00000019604	lrpprc	66	64.004	ENSPMGG00000016597	lrpprc	96	64.004	Periophthalmus_magnuspinnatus
ENSFHEG00000019604	lrpprc	93	45.652	ENSPMAG00000002147	lrpprc	99	45.652	Petromyzon_marinus
ENSFHEG00000019604	lrpprc	99	78.556	ENSPFOG00000011227	lrpprc	99	78.556	Poecilia_formosa
ENSFHEG00000019604	lrpprc	99	78.202	ENSPLAG00000004018	lrpprc	99	78.202	Poecilia_latipinna
ENSFHEG00000019604	lrpprc	99	78.344	ENSPMEG00000016425	lrpprc	99	78.344	Poecilia_mexicana
ENSFHEG00000019604	lrpprc	99	78.357	ENSPREG00000003662	lrpprc	99	78.202	Poecilia_reticulata
ENSFHEG00000019604	lrpprc	57	45.767	ENSPPYG00000029532	-	100	45.767	Pongo_abelii
ENSFHEG00000019604	lrpprc	82	51.613	ENSPCAG00000001430	LRPPRC	84	52.277	Procavia_capensis
ENSFHEG00000019604	lrpprc	99	49.683	ENSPVAG00000002007	LRPPRC	99	49.894	Pteropus_vampyrus
ENSFHEG00000019604	lrpprc	100	68.450	ENSPNYG00000000756	lrpprc	90	78.556	Pundamilia_nyererei
ENSFHEG00000019604	lrpprc	99	63.484	ENSPNAG00000002895	lrpprc	99	63.484	Pygocentrus_nattereri
ENSFHEG00000019604	lrpprc	99	49.331	ENSRNOG00000005877	Lrpprc	99	49.508	Rattus_norvegicus
ENSFHEG00000019604	lrpprc	99	49.370	ENSRBIG00000031552	LRPPRC	99	49.475	Rhinopithecus_bieti
ENSFHEG00000019604	lrpprc	99	50.000	ENSSBOG00000011807	LRPPRC	97	55.283	Saimiri_boliviensis_boliviensis
ENSFHEG00000019604	lrpprc	94	50.778	ENSSHAG00000018725	LRPPRC	99	50.778	Sarcophilus_harrisii
ENSFHEG00000019604	lrpprc	100	55.755	ENSSFOG00015001042	lrpprc	99	55.755	Scleropages_formosus
ENSFHEG00000019604	lrpprc	100	72.331	ENSSDUG00000019062	lrpprc	99	72.331	Seriola_dumerili
ENSFHEG00000019604	lrpprc	100	56.025	ENSSLDG00000023028	lrpprc	100	60.504	Seriola_lalandi_dorsalis
ENSFHEG00000019604	lrpprc	90	48.532	ENSSARG00000000426	LRPPRC	99	48.532	Sorex_araneus
ENSFHEG00000019604	lrpprc	100	65.281	ENSSPAG00000000162	lrpprc	100	65.696	Stegastes_partitus
ENSFHEG00000019604	lrpprc	99	50.387	ENSSSCG00000008452	LRPPRC	99	50.387	Sus_scrofa
ENSFHEG00000019604	lrpprc	93	48.310	ENSTGUG00000003759	LRPPRC	99	48.310	Taeniopygia_guttata
ENSFHEG00000019604	lrpprc	99	69.367	ENSTRUG00000008409	lrpprc	96	69.367	Takifugu_rubripes
ENSFHEG00000019604	lrpprc	99	67.461	ENSTNIG00000007470	lrpprc	100	68.557	Tetraodon_nigroviridis
ENSFHEG00000019604	lrpprc	99	48.992	ENSTTRG00000006403	LRPPRC	99	49.437	Tursiops_truncatus
ENSFHEG00000019604	lrpprc	94	48.925	ENSVPAG00000008993	LRPPRC	99	48.925	Vicugna_pacos
ENSFHEG00000019604	lrpprc	99	55.078	ENSXETG00000009296	lrpprc	99	55.360	Xenopus_tropicalis
ENSFHEG00000019604	lrpprc	99	72.578	ENSXCOG00000013343	lrpprc	95	76.321	Xiphophorus_couchianus
ENSFHEG00000019604	lrpprc	99	80.113	ENSXMAG00000018108	lrpprc	99	80.113	Xiphophorus_maculatus