EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000019913 (Gene tree)
Gene ID: 105932516
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 15267 bases
Position: chrKN811390.1:1330690-1345956
Accession: 105932516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000018090	AD	PF09793.9	7.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000026965	-	1731	XM_012871722	ENSFHEP00000018090	196 (aa)	XP_012727176	UPI000644ABFF

Gene Model

Click here to download ENSFHEG00000019913's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000019913's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000019913	lsm12b	100	83.673	ENSG00000161654	LSM12	100	83.673	Homo_sapiens
ENSFHEG00000019913	lsm12b	100	97.449	ENSAPOG00000007907	lsm12b	100	97.449	Acanthochromis_polyacanthus
ENSFHEG00000019913	lsm12b	100	81.910	ENSAMEG00000018321	LSM12	100	81.910	Ailuropoda_melanoleuca
ENSFHEG00000019913	lsm12b	100	95.918	ENSACIG00000008538	lsm12b	100	95.918	Amphilophus_citrinellus
ENSFHEG00000019913	lsm12b	100	97.959	ENSAOCG00000021847	lsm12b	88	97.959	Amphiprion_ocellaris
ENSFHEG00000019913	lsm12b	100	97.959	ENSAPEG00000002252	lsm12b	100	97.959	Amphiprion_percula
ENSFHEG00000019913	lsm12b	100	96.429	ENSATEG00000005705	lsm12b	100	96.429	Anabas_testudineus
ENSFHEG00000019913	lsm12b	100	82.653	ENSACAG00000004618	LSM12	100	82.653	Anolis_carolinensis
ENSFHEG00000019913	lsm12b	100	83.673	ENSANAG00000029011	LSM12	100	84.545	Aotus_nancymaae
ENSFHEG00000019913	lsm12b	100	96.429	ENSACLG00000026332	lsm12b	100	96.429	Astatotilapia_calliptera
ENSFHEG00000019913	lsm12b	100	92.347	ENSAMXG00000032952	lsm12b	100	92.347	Astyanax_mexicanus
ENSFHEG00000019913	lsm12b	100	86.224	ENSAMXG00000036117	lsm12a	91	86.224	Astyanax_mexicanus
ENSFHEG00000019913	lsm12b	100	83.673	ENSBTAG00000016252	LSM12	100	83.673	Bos_taurus
ENSFHEG00000019913	lsm12b	100	83.673	ENSCJAG00000048480	LSM12	100	84.545	Callithrix_jacchus
ENSFHEG00000019913	lsm12b	100	83.673	ENSCAFG00000014379	LSM12	92	83.673	Canis_familiaris
ENSFHEG00000019913	lsm12b	100	83.673	ENSCAFG00020012173	LSM12	100	83.673	Canis_lupus_dingo
ENSFHEG00000019913	lsm12b	100	83.673	ENSCHIG00000018175	LSM12	100	83.673	Capra_hircus
ENSFHEG00000019913	lsm12b	100	83.673	ENSTSYG00000036361	LSM12	100	83.673	Carlito_syrichta
ENSFHEG00000019913	lsm12b	83	79.630	ENSCAPG00000009647	LSM12	89	79.630	Cavia_aperea
ENSFHEG00000019913	lsm12b	100	82.653	ENSCPOG00000012860	LSM12	100	83.636	Cavia_porcellus
ENSFHEG00000019913	lsm12b	100	83.673	ENSCCAG00000032905	LSM12	100	84.545	Cebus_capucinus
ENSFHEG00000019913	lsm12b	100	83.673	ENSCATG00000030577	-	100	84.545	Cercocebus_atys
ENSFHEG00000019913	lsm12b	100	83.163	ENSCLAG00000015759	LSM12	100	83.636	Chinchilla_lanigera
ENSFHEG00000019913	lsm12b	100	84.184	ENSCSAG00000003486	LSM12	100	84.184	Chlorocebus_sabaeus
ENSFHEG00000019913	lsm12b	56	84.404	ENSCHOG00000001198	LSM12	100	84.404	Choloepus_hoffmanni
ENSFHEG00000019913	lsm12b	100	84.184	ENSCPBG00000027105	LSM12	100	84.184	Chrysemys_picta_bellii
ENSFHEG00000019913	lsm12b	100	83.673	ENSCANG00000043328	LSM12	100	84.545	Colobus_angolensis_palliatus
ENSFHEG00000019913	lsm12b	100	83.673	ENSCGRG00001002094	Lsm12	100	84.545	Cricetulus_griseus_chok1gshd
ENSFHEG00000019913	lsm12b	89	75.862	ENSCGRG00000004316	Lsm12	98	75.862	Cricetulus_griseus_crigri
ENSFHEG00000019913	lsm12b	100	97.449	ENSCSEG00000008434	lsm12b	100	97.449	Cynoglossus_semilaevis
ENSFHEG00000019913	lsm12b	100	98.980	ENSCVAG00000008755	lsm12b	100	98.980	Cyprinodon_variegatus
ENSFHEG00000019913	lsm12b	100	93.367	ENSDARG00000109510	lsm12b	100	93.367	Danio_rerio
ENSFHEG00000019913	lsm12b	100	86.735	ENSDARG00000028848	lsm12a	100	86.735	Danio_rerio
ENSFHEG00000019913	lsm12b	100	83.673	ENSDNOG00000002418	LSM12	91	83.673	Dasypus_novemcinctus
ENSFHEG00000019913	lsm12b	100	83.673	ENSDORG00000016381	Lsm12	100	84.545	Dipodomys_ordii
ENSFHEG00000019913	lsm12b	83	34.337	FBgn0030364	Lsm12	76	34.940	Drosophila_melanogaster
ENSFHEG00000019913	lsm12b	73	32.911	FBgn0036057	CG14164	83	32.911	Drosophila_melanogaster
ENSFHEG00000019913	lsm12b	88	75.145	ENSETEG00000011012	-	99	75.145	Echinops_telfairi
ENSFHEG00000019913	lsm12b	100	83.163	ENSETEG00000008374	LSM12	100	83.163	Echinops_telfairi
ENSFHEG00000019913	lsm12b	85	65.868	ENSEBUG00000016299	lsm12a	92	65.868	Eptatretus_burgeri
ENSFHEG00000019913	lsm12b	100	83.673	ENSEASG00005010155	LSM12	100	83.673	Equus_asinus_asinus
ENSFHEG00000019913	lsm12b	100	83.673	ENSECAG00000009071	LSM12	100	84.545	Equus_caballus
ENSFHEG00000019913	lsm12b	78	83.660	ENSEEUG00000002419	-	100	83.660	Erinaceus_europaeus
ENSFHEG00000019913	lsm12b	100	92.347	ENSELUG00000000256	-	100	92.347	Esox_lucius
ENSFHEG00000019913	lsm12b	100	94.898	ENSELUG00000015538	lsm12b	100	90.306	Esox_lucius
ENSFHEG00000019913	lsm12b	100	83.673	ENSFCAG00000037021	LSM12	100	83.673	Felis_catus
ENSFHEG00000019913	lsm12b	80	80.128	ENSFDAG00000008954	LSM12	91	80.128	Fukomys_damarensis
ENSFHEG00000019913	lsm12b	81	98.101	ENSGMOG00000015449	lsm12b	100	98.101	Gadus_morhua
ENSFHEG00000019913	lsm12b	78	84.314	ENSGALG00000039803	LSM12	100	84.314	Gallus_gallus
ENSFHEG00000019913	lsm12b	100	98.980	ENSGAFG00000011829	lsm12b	100	98.980	Gambusia_affinis
ENSFHEG00000019913	lsm12b	81	97.468	ENSGACG00000003428	lsm12b	100	97.468	Gasterosteus_aculeatus
ENSFHEG00000019913	lsm12b	100	83.163	ENSGAGG00000021965	LSM12	100	83.163	Gopherus_agassizii
ENSFHEG00000019913	lsm12b	100	83.673	ENSGGOG00000010589	-	100	84.545	Gorilla_gorilla
ENSFHEG00000019913	lsm12b	85	95.808	ENSHBUG00000007667	lsm12b	74	95.808	Haplochromis_burtoni
ENSFHEG00000019913	lsm12b	100	83.673	ENSHGLG00000011411	LSM12	100	84.545	Heterocephalus_glaber_female
ENSFHEG00000019913	lsm12b	79	83.117	ENSHGLG00100000241	LSM12	82	83.117	Heterocephalus_glaber_male
ENSFHEG00000019913	lsm12b	100	95.408	ENSHCOG00000002094	lsm12b	100	95.408	Hippocampus_comes
ENSFHEG00000019913	lsm12b	99	84.021	ENSIPUG00000008936	lsm12a	99	84.021	Ictalurus_punctatus
ENSFHEG00000019913	lsm12b	100	92.857	ENSIPUG00000014800	lsm12	100	92.857	Ictalurus_punctatus
ENSFHEG00000019913	lsm12b	100	83.673	ENSSTOG00000007403	LSM12	100	84.545	Ictidomys_tridecemlineatus
ENSFHEG00000019913	lsm12b	80	71.698	ENSJJAG00000014652	-	95	71.698	Jaculus_jaculus
ENSFHEG00000019913	lsm12b	96	74.211	ENSJJAG00000011793	-	100	74.211	Jaculus_jaculus
ENSFHEG00000019913	lsm12b	100	82.653	ENSJJAG00000004364	-	100	83.636	Jaculus_jaculus
ENSFHEG00000019913	lsm12b	85	96.407	ENSKMAG00000007704	lsm12b	56	96.407	Kryptolebias_marmoratus
ENSFHEG00000019913	lsm12b	100	97.449	ENSLBEG00000027999	lsm12b	100	97.449	Labrus_bergylta
ENSFHEG00000019913	lsm12b	100	86.224	ENSLACG00000015981	LSM12	100	86.224	Latimeria_chalumnae
ENSFHEG00000019913	lsm12b	100	90.816	ENSLOCG00000013079	lsm12b	99	90.816	Lepisosteus_oculatus
ENSFHEG00000019913	lsm12b	100	83.673	ENSLAFG00000005202	LSM12	100	83.673	Loxodonta_africana
ENSFHEG00000019913	lsm12b	100	83.673	ENSMFAG00000031376	LSM12	100	84.545	Macaca_fascicularis
ENSFHEG00000019913	lsm12b	65	72.414	ENSMMUG00000042106	-	100	72.414	Macaca_mulatta
ENSFHEG00000019913	lsm12b	100	83.673	ENSMMUG00000006804	LSM12	100	84.545	Macaca_mulatta
ENSFHEG00000019913	lsm12b	100	83.673	ENSMNEG00000030594	-	100	84.545	Macaca_nemestrina
ENSFHEG00000019913	lsm12b	100	83.673	ENSMLEG00000039934	LSM12	100	84.545	Mandrillus_leucophaeus
ENSFHEG00000019913	lsm12b	100	97.449	ENSMAMG00000004279	lsm12b	100	97.449	Mastacembelus_armatus
ENSFHEG00000019913	lsm12b	100	96.429	ENSMZEG00005005754	lsm12b	100	96.429	Maylandia_zebra
ENSFHEG00000019913	lsm12b	100	84.184	ENSMICG00000037219	LSM12	100	85.455	Microcebus_murinus
ENSFHEG00000019913	lsm12b	100	71.939	ENSMOCG00000017015	-	86	71.939	Microtus_ochrogaster
ENSFHEG00000019913	lsm12b	100	83.673	ENSMOCG00000019878	-	100	84.545	Microtus_ochrogaster
ENSFHEG00000019913	lsm12b	100	97.449	ENSMMOG00000020848	lsm12b	100	97.449	Mola_mola
ENSFHEG00000019913	lsm12b	100	97.449	ENSMALG00000007578	lsm12b	100	97.449	Monopterus_albus
ENSFHEG00000019913	lsm12b	100	83.163	MGP_CAROLIEiJ_G0017241	Lsm12	100	83.636	Mus_caroli
ENSFHEG00000019913	lsm12b	100	83.673	ENSMUSG00000020922	Lsm12	100	84.545	Mus_musculus
ENSFHEG00000019913	lsm12b	100	76.995	MGP_PahariEiJ_G0018371	Lsm12	100	84.545	Mus_pahari
ENSFHEG00000019913	lsm12b	100	83.163	MGP_SPRETEiJ_G0018084	Lsm12	99	85.185	Mus_spretus
ENSFHEG00000019913	lsm12b	100	84.184	ENSMLUG00000006391	LSM12	100	84.184	Myotis_lucifugus
ENSFHEG00000019913	lsm12b	100	59.113	ENSNGAG00000015429	-	100	59.113	Nannospalax_galili
ENSFHEG00000019913	lsm12b	100	83.673	ENSNGAG00000001870	Lsm12	100	84.545	Nannospalax_galili
ENSFHEG00000019913	lsm12b	100	96.429	ENSNBRG00000006266	lsm12b	100	96.429	Neolamprologus_brichardi
ENSFHEG00000019913	lsm12b	100	83.673	ENSNLEG00000005580	-	100	84.545	Nomascus_leucogenys
ENSFHEG00000019913	lsm12b	85	83.133	ENSMEUG00000007501	-	100	83.133	Notamacropus_eugenii
ENSFHEG00000019913	lsm12b	100	83.673	ENSOPRG00000008552	LSM12	100	83.673	Ochotona_princeps
ENSFHEG00000019913	lsm12b	100	76.020	ENSODEG00000007886	-	74	76.020	Octodon_degus
ENSFHEG00000019913	lsm12b	99	83.505	ENSODEG00000017998	-	99	83.505	Octodon_degus
ENSFHEG00000019913	lsm12b	100	96.429	ENSONIG00000007933	lsm12b	100	96.429	Oreochromis_niloticus
ENSFHEG00000019913	lsm12b	99	77.949	ENSOCUG00000027889	-	100	77.949	Oryctolagus_cuniculus
ENSFHEG00000019913	lsm12b	99	78.462	ENSOCUG00000021254	-	100	78.462	Oryctolagus_cuniculus
ENSFHEG00000019913	lsm12b	99	77.436	ENSOCUG00000024823	-	100	77.436	Oryctolagus_cuniculus
ENSFHEG00000019913	lsm12b	100	81.910	ENSOCUG00000008566	-	100	81.910	Oryctolagus_cuniculus
ENSFHEG00000019913	lsm12b	100	95.918	ENSORLG00000011310	lsm12b	100	95.918	Oryzias_latipes
ENSFHEG00000019913	lsm12b	100	95.918	ENSORLG00020002060	lsm12b	92	95.918	Oryzias_latipes_hni
ENSFHEG00000019913	lsm12b	100	95.918	ENSORLG00015001647	lsm12b	92	95.918	Oryzias_latipes_hsok
ENSFHEG00000019913	lsm12b	100	96.939	ENSOMEG00000006184	lsm12b	92	96.939	Oryzias_melastigma
ENSFHEG00000019913	lsm12b	100	84.184	ENSOGAG00000010489	LSM12	100	84.184	Otolemur_garnettii
ENSFHEG00000019913	lsm12b	100	80.693	ENSOARG00000006589	LSM12	100	80.693	Ovis_aries
ENSFHEG00000019913	lsm12b	100	74.490	ENSPPAG00000034974	-	100	74.490	Pan_paniscus
ENSFHEG00000019913	lsm12b	100	83.673	ENSPPRG00000023420	LSM12	100	83.673	Panthera_pardus
ENSFHEG00000019913	lsm12b	78	83.660	ENSPTIG00000012704	-	82	83.660	Panthera_tigris_altaica
ENSFHEG00000019913	lsm12b	72	82.727	ENSPTIG00000014850	-	100	82.727	Panthera_tigris_altaica
ENSFHEG00000019913	lsm12b	100	83.673	ENSPTRG00000009261	LSM12	100	84.545	Pan_troglodytes
ENSFHEG00000019913	lsm12b	100	83.673	ENSPANG00000021315	-	100	84.545	Papio_anubis
ENSFHEG00000019913	lsm12b	100	83.163	ENSPKIG00000017932	-	100	83.163	Paramormyrops_kingsleyae
ENSFHEG00000019913	lsm12b	100	93.367	ENSPKIG00000021058	lsm12b	100	93.367	Paramormyrops_kingsleyae
ENSFHEG00000019913	lsm12b	100	96.429	ENSPMGG00000021344	lsm12b	100	96.429	Periophthalmus_magnuspinnatus
ENSFHEG00000019913	lsm12b	100	83.673	ENSPEMG00000012199	Lsm12	100	84.545	Peromyscus_maniculatus_bairdii
ENSFHEG00000019913	lsm12b	89	66.857	ENSPMAG00000005461	lsm12a	99	66.857	Petromyzon_marinus
ENSFHEG00000019913	lsm12b	100	83.673	ENSPCIG00000020244	LSM12	100	83.673	Phascolarctos_cinereus
ENSFHEG00000019913	lsm12b	100	97.959	ENSPFOG00000015930	lsm12b	100	97.959	Poecilia_formosa
ENSFHEG00000019913	lsm12b	100	97.959	ENSPLAG00000021089	lsm12b	100	97.959	Poecilia_latipinna
ENSFHEG00000019913	lsm12b	100	97.959	ENSPMEG00000012961	lsm12b	100	97.959	Poecilia_mexicana
ENSFHEG00000019913	lsm12b	87	98.830	ENSPREG00000010236	lsm12b	95	98.830	Poecilia_reticulata
ENSFHEG00000019913	lsm12b	100	83.673	ENSPPYG00000008344	LSM12	100	83.673	Pongo_abelii
ENSFHEG00000019913	lsm12b	81	83.648	ENSPCAG00000008790	LSM12	100	83.648	Procavia_capensis
ENSFHEG00000019913	lsm12b	100	83.673	ENSPCOG00000027951	LSM12	100	84.545	Propithecus_coquereli
ENSFHEG00000019913	lsm12b	100	84.184	ENSPVAG00000013706	LSM12	100	84.184	Pteropus_vampyrus
ENSFHEG00000019913	lsm12b	100	96.429	ENSPNYG00000003386	lsm12b	100	96.429	Pundamilia_nyererei
ENSFHEG00000019913	lsm12b	100	93.367	ENSPNAG00000004186	lsm12b	100	93.367	Pygocentrus_nattereri
ENSFHEG00000019913	lsm12b	100	85.714	ENSPNAG00000018435	lsm12a	100	85.714	Pygocentrus_nattereri
ENSFHEG00000019913	lsm12b	100	83.673	ENSRNOG00000020894	Lsm12	100	83.673	Rattus_norvegicus
ENSFHEG00000019913	lsm12b	100	83.673	ENSRBIG00000027910	LSM12	100	84.545	Rhinopithecus_bieti
ENSFHEG00000019913	lsm12b	99	52.062	ENSRROG00000000537	-	99	52.062	Rhinopithecus_roxellana
ENSFHEG00000019913	lsm12b	100	83.673	ENSRROG00000045530	-	100	84.545	Rhinopithecus_roxellana
ENSFHEG00000019913	lsm12b	100	83.673	ENSSBOG00000025310	LSM12	100	84.545	Saimiri_boliviensis_boliviensis
ENSFHEG00000019913	lsm12b	81	82.278	ENSSHAG00000014914	LSM12	100	82.278	Sarcophilus_harrisii
ENSFHEG00000019913	lsm12b	100	93.367	ENSSFOG00015020392	lsm12a	100	93.367	Scleropages_formosus
ENSFHEG00000019913	lsm12b	100	93.367	ENSSFOG00015009612	lsm12	100	93.367	Scleropages_formosus
ENSFHEG00000019913	lsm12b	100	97.449	ENSSMAG00000008089	lsm12b	100	97.449	Scophthalmus_maximus
ENSFHEG00000019913	lsm12b	100	97.449	ENSSDUG00000012711	lsm12b	100	97.449	Seriola_dumerili
ENSFHEG00000019913	lsm12b	100	97.449	ENSSLDG00000007404	lsm12b	100	97.449	Seriola_lalandi_dorsalis
ENSFHEG00000019913	lsm12b	78	83.007	ENSSARG00000005537	LSM12	100	83.007	Sorex_araneus
ENSFHEG00000019913	lsm12b	100	84.184	ENSSPUG00000011984	LSM12	100	84.184	Sphenodon_punctatus
ENSFHEG00000019913	lsm12b	100	97.959	ENSSPAG00000017058	lsm12b	100	97.959	Stegastes_partitus
ENSFHEG00000019913	lsm12b	100	83.673	ENSSSCG00000032394	LSM12	100	83.673	Sus_scrofa
ENSFHEG00000019913	lsm12b	100	96.429	ENSTRUG00000007121	lsm12b	100	96.429	Takifugu_rubripes
ENSFHEG00000019913	lsm12b	100	95.408	ENSTNIG00000014436	lsm12b	100	95.408	Tetraodon_nigroviridis
ENSFHEG00000019913	lsm12b	100	83.163	ENSTBEG00000012523	-	100	83.163	Tupaia_belangeri
ENSFHEG00000019913	lsm12b	100	81.122	ENSTBEG00000012392	-	100	81.122	Tupaia_belangeri
ENSFHEG00000019913	lsm12b	100	83.673	ENSTTRG00000010433	LSM12	100	83.673	Tursiops_truncatus
ENSFHEG00000019913	lsm12b	100	83.673	ENSUAMG00000006313	LSM12	100	83.673	Ursus_americanus
ENSFHEG00000019913	lsm12b	81	81.013	ENSUMAG00000012987	LSM12	90	81.013	Ursus_maritimus
ENSFHEG00000019913	lsm12b	100	79.082	ENSVPAG00000011145	LSM12	100	79.082	Vicugna_pacos
ENSFHEG00000019913	lsm12b	100	83.673	ENSVVUG00000017581	LSM12	100	83.673	Vulpes_vulpes
ENSFHEG00000019913	lsm12b	82	60.000	ENSXETG00000003371	lsm12	77	60.000	Xenopus_tropicalis
ENSFHEG00000019913	lsm12b	100	98.980	ENSXCOG00000003994	lsm12b	100	98.980	Xiphophorus_couchianus
ENSFHEG00000019913	lsm12b	100	98.980	ENSXMAG00000020950	lsm12b	100	98.980	Xiphophorus_maculatus