EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000020046 (Gene tree)
Gene ID
105919204
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Plus strand
Length
21676 bases
Position
chrKN805930.1:154862-176537
Accession
105919204
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000018221RRM_1PF00076.221.1e-4312
ENSFHEP00000018221RRM_1PF00076.221.1e-4322
ENSFHEP00000018232RRM_1PF00076.221.3e-4312
ENSFHEP00000018232RRM_1PF00076.221.3e-4322
ENSFHEP00000033117RRM_1PF00076.221.4e-4312
ENSFHEP00000033117RRM_1PF00076.221.4e-4322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000027147-2801XM_012854462ENSFHEP00000018232513 (aa)XP_012709916-
ENSFHET00000034279-2750XM_012854466ENSFHEP00000018221496 (aa)XP_012709920-
ENSFHET00000027134-2637XM_012854460ENSFHEP00000033117526 (aa)XP_012709914UPI0006452256
Gene Model
Click here to download ENSFHEG00000020046's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000020046's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000020046puf60b9682.485ENSFHEG00000021687PUF6010083.402
ENSFHEG00000020046puf60b5636.275ENSFHEG00000016025u2af2a6638.235
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000020046puf60b10085.988ENSG00000179950PUF6010084.837Homo_sapiens
ENSFHEG00000020046puf60b10097.661ENSAPOG00000001713puf60b10097.338Acanthochromis_polyacanthus
ENSFHEG00000020046puf60b10084.069ENSAMEG00000006406PUF609381.973Ailuropoda_melanoleuca
ENSFHEG00000020046puf60b10098.051ENSACIG00000021705puf60b10098.051Amphilophus_citrinellus
ENSFHEG00000020046puf60b10077.821ENSACIG00000003263-9977.670Amphilophus_citrinellus
ENSFHEG00000020046puf60b10097.661ENSAOCG00000005395puf60b10097.661Amphiprion_ocellaris
ENSFHEG00000020046puf60b10083.658ENSAOCG00000015558-10083.302Amphiprion_ocellaris
ENSFHEG00000020046puf60b10095.161ENSAPEG00000011923puf60b9795.161Amphiprion_percula
ENSFHEG00000020046puf60b10077.154ENSAPEG00000001836-9978.088Amphiprion_percula
ENSFHEG00000020046puf60b10098.441ENSATEG00000001730puf60b10097.719Anabas_testudineus
ENSFHEG00000020046puf60b10082.296ENSATEG00000006303-10081.973Anabas_testudineus
ENSFHEG00000020046puf60b10086.564ENSAPLG00000010150PUF6010084.820Anas_platyrhynchos
ENSFHEG00000020046puf60b10085.496ENSACAG00000001645PUF609784.091Anolis_carolinensis
ENSFHEG00000020046puf60b10085.797ENSANAG00000018626PUF6010084.645Aotus_nancymaae
ENSFHEG00000020046puf60b10098.051ENSACLG00000004462puf60b10098.051Astatotilapia_calliptera
ENSFHEG00000020046puf60b10080.835ENSAMXG00000041030puf60b10081.404Astyanax_mexicanus
ENSFHEG00000020046puf60b10087.425ENSAMXG00000036570puf60a9787.625Astyanax_mexicanus
ENSFHEG00000020046puf60b10086.372ENSBTAG00000037493PUF6010083.738Bos_taurus
ENSFHEG00000020046puf60b8053.710WBGene00004389rnp-68850.779Caenorhabditis_elegans
ENSFHEG00000020046puf60b10085.988ENSCJAG00000021485PUF6010083.364Callithrix_jacchus
ENSFHEG00000020046puf60b10085.797ENSCAFG00000001400PUF609383.871Canis_familiaris
ENSFHEG00000020046puf60b10086.180ENSCAFG00020018754PUF6010083.551Canis_lupus_dingo
ENSFHEG00000020046puf60b10086.372ENSCHIG00000001618PUF608784.440Capra_hircus
ENSFHEG00000020046puf60b10086.180ENSTSYG00000011912PUF6010085.029Carlito_syrichta
ENSFHEG00000020046puf60b10081.333ENSCPOG00000014613PUF609479.284Cavia_porcellus
ENSFHEG00000020046puf60b10086.180ENSCCAG00000007744PUF6010083.551Cebus_capucinus
ENSFHEG00000020046puf60b10085.988ENSCATG00000035405PUF6010083.364Cercocebus_atys
ENSFHEG00000020046puf60b10086.180ENSCLAG00000009154PUF609384.250Chinchilla_lanigera
ENSFHEG00000020046puf60b10085.988ENSCSAG00000008878PUF6010084.837Chlorocebus_sabaeus
ENSFHEG00000020046puf60b10085.605ENSCPBG00000005595PUF609983.804Chrysemys_picta_bellii
ENSFHEG00000020046puf60b6261.994ENSCING00000002156-8762.500Ciona_intestinalis
ENSFHEG00000020046puf60b9947.655ENSCING00000008436-9946.904Ciona_intestinalis
ENSFHEG00000020046puf60b9749.482ENSCSAVG00000004765-9748.571Ciona_savignyi
ENSFHEG00000020046puf60b9754.286ENSCSAVG00000001385-9954.143Ciona_savignyi
ENSFHEG00000020046puf60b8185.545ENSCANG00000041843PUF6010084.123Colobus_angolensis_palliatus
ENSFHEG00000020046puf60b10086.372ENSCGRG00001017442Puf609384.440Cricetulus_griseus_chok1gshd
ENSFHEG00000020046puf60b10086.372ENSCGRG00000003717Puf609384.440Cricetulus_griseus_crigri
ENSFHEG00000020046puf60b10098.051ENSCSEG00000019887puf60b9497.333Cynoglossus_semilaevis
ENSFHEG00000020046puf60b10079.482ENSCSEG00000014845-8980.279Cynoglossus_semilaevis
ENSFHEG00000020046puf60b9083.184ENSCVAG00000001560-9881.410Cyprinodon_variegatus
ENSFHEG00000020046puf60b10099.025ENSCVAG00000009386puf60b10099.025Cyprinodon_variegatus
ENSFHEG00000020046puf60b10081.784ENSDARG00000001241puf60b9998.413Danio_rerio
ENSFHEG00000020046puf60b10087.283ENSDARG00000032175puf60a9991.925Danio_rerio
ENSFHEG00000020046puf60b9971.595ENSDNOG00000043278PUF609071.206Dasypus_novemcinctus
ENSFHEG00000020046puf60b10086.372ENSDORG00000004585Puf609584.440Dipodomys_ordii
ENSFHEG00000020046puf60b8466.667FBgn0028577hfp7267.843Drosophila_melanogaster
ENSFHEG00000020046puf60b9772.371ENSEBUG00000005470-9466.479Eptatretus_burgeri
ENSFHEG00000020046puf60b10061.565ENSEBUG00000014291puf60b8462.413Eptatretus_burgeri
ENSFHEG00000020046puf60b10086.180ENSEASG00005009695PUF6010083.551Equus_asinus_asinus
ENSFHEG00000020046puf60b10086.180ENSECAG00000024681PUF609884.121Equus_caballus
ENSFHEG00000020046puf60b10088.600ENSELUG00000018443-10087.925Esox_lucius
ENSFHEG00000020046puf60b10087.977ENSELUG00000006507puf60b10085.278Esox_lucius
ENSFHEG00000020046puf60b10086.180ENSFCAG00000001045PUF6010085.029Felis_catus
ENSFHEG00000020046puf60b10077.351ENSFALG00000001136PUF609876.281Ficedula_albicollis
ENSFHEG00000020046puf60b10085.988ENSFDAG00000017177PUF609384.250Fukomys_damarensis
ENSFHEG00000020046puf60b10083.012ENSGMOG00000006392puf60b10082.061Gadus_morhua
ENSFHEG00000020046puf60b6689.504ENSGALG00000039901PUF609390.533Gallus_gallus
ENSFHEG00000020046puf60b10080.723ENSGAFG00000004334-9981.109Gambusia_affinis
ENSFHEG00000020046puf60b10099.620ENSGAFG00000021040puf60b10099.610Gambusia_affinis
ENSFHEG00000020046puf60b10084.211ENSGACG00000004717puf60b9884.393Gasterosteus_aculeatus
ENSFHEG00000020046puf60b10073.152ENSGACG00000001484-10072.179Gasterosteus_aculeatus
ENSFHEG00000020046puf60b10085.605ENSGAGG00000013289PUF609383.647Gopherus_agassizii
ENSFHEG00000020046puf60b10085.988ENSGGOG00000004646PUF6010083.364Gorilla_gorilla
ENSFHEG00000020046puf60b10083.702ENSHBUG00000009634-10083.300Haplochromis_burtoni
ENSFHEG00000020046puf60b10098.051ENSHBUG00000015118puf60b10098.051Haplochromis_burtoni
ENSFHEG00000020046puf60b10085.988ENSHGLG00000006111PUF609384.250Heterocephalus_glaber_female
ENSFHEG00000020046puf60b10085.988ENSHGLG00100012362PUF609384.250Heterocephalus_glaber_male
ENSFHEG00000020046puf60b10092.481ENSHCOG00000015541puf60b10093.071Hippocampus_comes
ENSFHEG00000020046puf60b9867.451ENSHCOG00000000378-9966.163Hippocampus_comes
ENSFHEG00000020046puf60b10082.197ENSIPUG00000004660puf60b9981.818Ictalurus_punctatus
ENSFHEG00000020046puf60b10085.542ENSIPUG00000002453puf60a9985.141Ictalurus_punctatus
ENSFHEG00000020046puf60b10086.180ENSSTOG00000025037PUF609484.250Ictidomys_tridecemlineatus
ENSFHEG00000020046puf60b10086.372ENSJJAG00000001076Puf609384.440Jaculus_jaculus
ENSFHEG00000020046puf60b10077.927ENSKMAG00000010106-10078.352Kryptolebias_marmoratus
ENSFHEG00000020046puf60b10099.220ENSKMAG00000016745puf60b10099.220Kryptolebias_marmoratus
ENSFHEG00000020046puf60b10093.957ENSLBEG00000012505puf60b10094.027Labrus_bergylta
ENSFHEG00000020046puf60b7380.054ENSLACG00000005456PUF6010078.016Latimeria_chalumnae
ENSFHEG00000020046puf60b10089.126ENSLOCG00000010106puf60b10088.636Lepisosteus_oculatus
ENSFHEG00000020046puf60b10085.029ENSLAFG00000022929PUF609483.302Loxodonta_africana
ENSFHEG00000020046puf60b10085.988ENSMFAG00000043373PUF6010083.364Macaca_fascicularis
ENSFHEG00000020046puf60b10085.988ENSMMUG00000013558PUF6010083.364Macaca_mulatta
ENSFHEG00000020046puf60b10085.988ENSMNEG00000031099PUF6010083.364Macaca_nemestrina
ENSFHEG00000020046puf60b10085.988ENSMLEG00000040009PUF6010084.837Mandrillus_leucophaeus
ENSFHEG00000020046puf60b10083.495ENSMAMG00000019476-10082.955Mastacembelus_armatus
ENSFHEG00000020046puf60b10096.296ENSMAMG00000010394puf60b10093.738Mastacembelus_armatus
ENSFHEG00000020046puf60b10083.463ENSMZEG00005019425-10082.353Maylandia_zebra
ENSFHEG00000020046puf60b10098.051ENSMZEG00005018515puf60b10098.051Maylandia_zebra
ENSFHEG00000020046puf60b10086.564ENSMGAG00000013070PUF609390.855Meleagris_gallopavo
ENSFHEG00000020046puf60b9671.047ENSMAUG00000018549-9570.287Mesocricetus_auratus
ENSFHEG00000020046puf60b6990.278ENSMAUG00000014267-9087.432Mesocricetus_auratus
ENSFHEG00000020046puf60b10086.180ENSMICG00000012226PUF6010083.551Microcebus_murinus
ENSFHEG00000020046puf60b10086.372ENSMOCG00000018780Puf609384.440Microtus_ochrogaster
ENSFHEG00000020046puf60b10076.305ENSMMOG00000018059-9976.376Mola_mola
ENSFHEG00000020046puf60b10098.246ENSMMOG00000004217puf60b10098.246Mola_mola
ENSFHEG00000020046puf60b10085.797ENSMODG00000009161PUF609483.871Monodelphis_domestica
ENSFHEG00000020046puf60b10082.296ENSMALG00000000200-10081.214Monopterus_albus
ENSFHEG00000020046puf60b10090.058ENSMALG00000006797puf60b10089.544Monopterus_albus
ENSFHEG00000020046puf60b10086.564MGP_CAROLIEiJ_G0019910Puf609384.820Mus_caroli
ENSFHEG00000020046puf60b10086.564ENSMUSG00000002524Puf609384.820Mus_musculus
ENSFHEG00000020046puf60b10086.564MGP_PahariEiJ_G0019920Puf609384.820Mus_pahari
ENSFHEG00000020046puf60b10086.564MGP_SPRETEiJ_G0020812Puf609384.820Mus_spretus
ENSFHEG00000020046puf60b10085.988ENSMPUG00000008137PUF609284.061Mustela_putorius_furo
ENSFHEG00000020046puf60b10082.143ENSMLUG00000013032-9780.952Myotis_lucifugus
ENSFHEG00000020046puf60b10085.605ENSMLUG00000000238-9383.681Myotis_lucifugus
ENSFHEG00000020046puf60b10086.372ENSNGAG00000000712Puf6010085.221Nannospalax_galili
ENSFHEG00000020046puf60b8395.413ENSNBRG00000013047puf60b9797.362Neolamprologus_brichardi
ENSFHEG00000020046puf60b10083.463ENSNBRG00000017223-10082.353Neolamprologus_brichardi
ENSFHEG00000020046puf60b10085.988ENSNLEG00000002156PUF609884.061Nomascus_leucogenys
ENSFHEG00000020046puf60b7293.863ENSOPRG00000002147PUF607293.863Ochotona_princeps
ENSFHEG00000020046puf60b9863.690ENSODEG00000015513-9762.089Octodon_degus
ENSFHEG00000020046puf60b7190.294ENSODEG00000014024-8990.294Octodon_degus
ENSFHEG00000020046puf60b10083.268ENSONIG00000014030-9981.973Oreochromis_niloticus
ENSFHEG00000020046puf60b10098.051ENSONIG00000006247puf60b9898.073Oreochromis_niloticus
ENSFHEG00000020046puf60b9772.200ENSOANG00000006962PUF609870.099Ornithorhynchus_anatinus
ENSFHEG00000020046puf60b10098.246ENSORLG00000012279puf60b10098.246Oryzias_latipes
ENSFHEG00000020046puf60b9982.081ENSORLG00000028655-9981.888Oryzias_latipes
ENSFHEG00000020046puf60b10098.246ENSORLG00020007333puf6010098.246Oryzias_latipes_hni
ENSFHEG00000020046puf60b9982.718ENSORLG00020018144-9981.818Oryzias_latipes_hni
ENSFHEG00000020046puf60b9982.718ENSORLG00015016833-9981.629Oryzias_latipes_hsok
ENSFHEG00000020046puf60b10097.864ENSORLG00015007718puf60b10097.864Oryzias_latipes_hsok
ENSFHEG00000020046puf60b9982.897ENSOMEG00000022185-9981.784Oryzias_melastigma
ENSFHEG00000020046puf60b10095.802ENSOMEG00000001643puf60b10095.531Oryzias_melastigma
ENSFHEG00000020046puf60b10086.180ENSOGAG00000006259PUF609384.250Otolemur_garnettii
ENSFHEG00000020046puf60b10084.556ENSOARG00000016235PUF609981.853Ovis_aries
ENSFHEG00000020046puf60b10085.988ENSPPAG00000029933PUF6010083.364Pan_paniscus
ENSFHEG00000020046puf60b10086.180ENSPPRG00000003257PUF6010085.029Panthera_pardus
ENSFHEG00000020046puf60b10085.516ENSPTIG00000009795PUF609981.973Panthera_tigris_altaica
ENSFHEG00000020046puf60b10085.988ENSPTRG00000043963-9884.061Pan_troglodytes
ENSFHEG00000020046puf60b10085.988ENSPTRG00000020670PUF6010083.364Pan_troglodytes
ENSFHEG00000020046puf60b10085.988ENSPANG00000021936PUF6010083.364Papio_anubis
ENSFHEG00000020046puf60b10089.400ENSPKIG00000004295puf60a9991.940Paramormyrops_kingsleyae
ENSFHEG00000020046puf60b10090.058ENSPKIG00000012204puf60b10090.838Paramormyrops_kingsleyae
ENSFHEG00000020046puf60b10085.988ENSPSIG00000004679PUF609984.250Pelodiscus_sinensis
ENSFHEG00000020046puf60b10095.930ENSPMGG00000013444puf60b10095.560Periophthalmus_magnuspinnatus
ENSFHEG00000020046puf60b10086.372ENSPEMG00000008820Puf609384.440Peromyscus_maniculatus_bairdii
ENSFHEG00000020046puf60b10086.180ENSPCIG00000020270PUF609885.029Phascolarctos_cinereus
ENSFHEG00000020046puf60b10081.942ENSPFOG00000011118-10081.250Poecilia_formosa
ENSFHEG00000020046puf60b10099.810ENSPFOG00000019217puf60b9899.798Poecilia_formosa
ENSFHEG00000020046puf60b10099.805ENSPLAG00000010754puf60b10099.805Poecilia_latipinna
ENSFHEG00000020046puf60b10082.330ENSPLAG00000017025-9281.250Poecilia_latipinna
ENSFHEG00000020046puf60b10082.136ENSPMEG00000009767-9281.439Poecilia_mexicana
ENSFHEG00000020046puf60b10099.810ENSPMEG00000000838puf60b10099.805Poecilia_mexicana
ENSFHEG00000020046puf60b10097.782ENSPREG00000005440puf60b10097.782Poecilia_reticulata
ENSFHEG00000020046puf60b8183.886ENSPPYG00000018951-9582.464Pongo_abelii
ENSFHEG00000020046puf60b8185.545ENSPCAG00000014837PUF6010084.123Procavia_capensis
ENSFHEG00000020046puf60b10085.988ENSPCOG00000027981PUF6010083.364Propithecus_coquereli
ENSFHEG00000020046puf60b10096.203ENSPVAG00000016167PUF608196.203Pteropus_vampyrus
ENSFHEG00000020046puf60b10083.463ENSPNYG00000004273-10082.353Pundamilia_nyererei
ENSFHEG00000020046puf60b10098.051ENSPNYG00000002556puf60b10098.051Pundamilia_nyererei
ENSFHEG00000020046puf60b10082.863ENSPNAG00000019415puf60b8982.460Pygocentrus_nattereri
ENSFHEG00000020046puf60b10087.425ENSPNAG00000019909puf60a9987.625Pygocentrus_nattereri
ENSFHEG00000020046puf60b10086.564ENSRNOG00000009960Puf609384.820Rattus_norvegicus
ENSFHEG00000020046puf60b10085.988ENSRBIG00000035274PUF6010083.364Rhinopithecus_bieti
ENSFHEG00000020046puf60b10085.988ENSRROG00000029360PUF6010083.364Rhinopithecus_roxellana
ENSFHEG00000020046puf60b10084.645ENSSBOG00000027089PUF609982.176Saimiri_boliviensis_boliviensis
ENSFHEG00000020046puf60b9085.714ENSSHAG00000006668PUF609083.579Sarcophilus_harrisii
ENSFHEG00000020046puf60b10083.044ENSSFOG00015019619puf60b9985.772Scleropages_formosus
ENSFHEG00000020046puf60b9589.817ENSSFOG00015019371puf60a9889.817Scleropages_formosus
ENSFHEG00000020046puf60b7798.366ENSSMAG00000016381puf60b7898.366Scophthalmus_maximus
ENSFHEG00000020046puf60b10096.374ENSSDUG00000009935puf60b9996.415Seriola_dumerili
ENSFHEG00000020046puf60b9783.735ENSSDUG00000007048-9783.789Seriola_dumerili
ENSFHEG00000020046puf60b10081.538ENSSLDG00000007366-9981.766Seriola_lalandi_dorsalis
ENSFHEG00000020046puf60b10098.441ENSSLDG00000024011puf60b10095.825Seriola_lalandi_dorsalis
ENSFHEG00000020046puf60b6578.171ENSSPUG00000013518PUF609278.788Sphenodon_punctatus
ENSFHEG00000020046puf60b10095.446ENSSPAG00000012144puf60b10095.446Stegastes_partitus
ENSFHEG00000020046puf60b10083.333ENSSPAG00000020285-10083.721Stegastes_partitus
ENSFHEG00000020046puf60b10086.180ENSSSCG00000038800PUF609784.524Sus_scrofa
ENSFHEG00000020046puf60b10083.716ENSTGUG00000012797-10082.510Taeniopygia_guttata
ENSFHEG00000020046puf60b10097.271ENSTRUG00000005420puf60b10094.687Takifugu_rubripes
ENSFHEG00000020046puf60b10081.690ENSTRUG00000008843-10081.087Takifugu_rubripes
ENSFHEG00000020046puf60b10097.076ENSTNIG00000013675puf60b9997.110Tetraodon_nigroviridis
ENSFHEG00000020046puf60b10079.727ENSTNIG00000003069-9979.922Tetraodon_nigroviridis
ENSFHEG00000020046puf60b7766.382ENSTBEG00000001899-10067.236Tupaia_belangeri
ENSFHEG00000020046puf60b5786.254ENSTBEG00000002751-9785.911Tupaia_belangeri
ENSFHEG00000020046puf60b10084.837ENSTTRG00000017088PUF6010084.069Tursiops_truncatus
ENSFHEG00000020046puf60b10086.180ENSUAMG00000024917PUF6010083.551Ursus_americanus
ENSFHEG00000020046puf60b10081.190ENSUMAG00000000272PUF609379.127Ursus_maritimus
ENSFHEG00000020046puf60b10086.180ENSVVUG00000022527PUF6010085.029Vulpes_vulpes
ENSFHEG00000020046puf60b10083.877ENSXETG00000012469puf609882.540Xenopus_tropicalis
ENSFHEG00000020046puf60b10099.798ENSXCOG00000012355puf60b10099.798Xiphophorus_couchianus
ENSFHEG00000020046puf60b10099.810ENSXMAG00000001862puf60b10099.805Xiphophorus_maculatus
ENSFHEG00000020046puf60b10081.727ENSXMAG00000010507-9881.526Xiphophorus_maculatus

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