EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000020125 (Gene tree)
Gene ID: 105938187
Gene Symbol: prpf18
Alias: zgc:91830
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 10571 bases
Position: chrKN811537.1:730974-741544
Accession: 105938187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000033163	PRP4	PF08799.11	2.1e-13	1	1
ENSFHEP00000033163	Prp18	PF02840.15	9.9e-63	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000027196	-	822	XM_021307216	ENSFHEP00000033163	273 (aa)	XP_021162891	-

Gene Model

Click here to download ENSFHEG00000020125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000020125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000020125	prpf18	98	89.513	ENSG00000165630	PRPF18	80	89.377	Homo_sapiens
ENSFHEG00000020125	prpf18	98	94.757	ENSAPOG00000024177	prpf18	80	94.872	Acanthochromis_polyacanthus
ENSFHEG00000020125	prpf18	98	89.139	ENSAMEG00000013591	-	80	89.011	Ailuropoda_melanoleuca
ENSFHEG00000020125	prpf18	98	94.382	ENSACIG00000001186	prpf18	80	94.505	Amphilophus_citrinellus
ENSFHEG00000020125	prpf18	95	95.000	ENSAOCG00000006572	prpf18	73	95.094	Amphiprion_ocellaris
ENSFHEG00000020125	prpf18	98	95.131	ENSAPEG00000004564	prpf18	80	95.238	Amphiprion_percula
ENSFHEG00000020125	prpf18	98	95.131	ENSATEG00000000303	prpf18	80	95.238	Anabas_testudineus
ENSFHEG00000020125	prpf18	98	87.640	ENSAPLG00000003387	-	80	87.546	Anas_platyrhynchos
ENSFHEG00000020125	prpf18	98	88.015	ENSACAG00000000818	-	79	87.912	Anolis_carolinensis
ENSFHEG00000020125	prpf18	98	89.513	ENSANAG00000037445	-	80	89.377	Aotus_nancymaae
ENSFHEG00000020125	prpf18	98	94.757	ENSACLG00000026296	prpf18	80	94.872	Astatotilapia_calliptera
ENSFHEG00000020125	prpf18	98	92.135	ENSAMXG00000012848	prpf18	78	92.308	Astyanax_mexicanus
ENSFHEG00000020125	prpf18	98	89.139	ENSBTAG00000017244	PRPF18	80	89.011	Bos_taurus
ENSFHEG00000020125	prpf18	98	42.647	WBGene00009320	F32B6.3	76	42.647	Caenorhabditis_elegans
ENSFHEG00000020125	prpf18	98	89.513	ENSCJAG00000009432	-	80	89.377	Callithrix_jacchus
ENSFHEG00000020125	prpf18	98	89.139	ENSCAFG00000004735	-	80	89.011	Canis_familiaris
ENSFHEG00000020125	prpf18	98	89.139	ENSCAFG00020007712	-	80	89.011	Canis_lupus_dingo
ENSFHEG00000020125	prpf18	98	89.139	ENSCHIG00000000499	-	80	89.011	Capra_hircus
ENSFHEG00000020125	prpf18	98	89.139	ENSTSYG00000003517	-	80	89.011	Carlito_syrichta
ENSFHEG00000020125	prpf18	56	89.474	ENSCAPG00000010527	-	97	89.474	Cavia_aperea
ENSFHEG00000020125	prpf18	98	89.513	ENSCPOG00000021069	-	80	89.377	Cavia_porcellus
ENSFHEG00000020125	prpf18	98	89.513	ENSCCAG00000036822	-	80	89.377	Cebus_capucinus
ENSFHEG00000020125	prpf18	84	85.526	ENSCATG00000016633	-	77	75.824	Cercocebus_atys
ENSFHEG00000020125	prpf18	98	89.513	ENSCLAG00000011770	-	80	89.377	Chinchilla_lanigera
ENSFHEG00000020125	prpf18	98	89.513	ENSCSAG00000013109	-	78	89.377	Chlorocebus_sabaeus
ENSFHEG00000020125	prpf18	98	83.274	ENSCPBG00000003100	-	81	83.972	Chrysemys_picta_bellii
ENSFHEG00000020125	prpf18	99	58.824	ENSCING00000020481	-	78	58.824	Ciona_intestinalis
ENSFHEG00000020125	prpf18	99	58.824	ENSCSAVG00000010546	-	79	58.824	Ciona_savignyi
ENSFHEG00000020125	prpf18	98	89.513	ENSCANG00000034900	-	80	89.377	Colobus_angolensis_palliatus
ENSFHEG00000020125	prpf18	98	89.513	ENSCGRG00001023665	Prpf18	80	89.377	Cricetulus_griseus_chok1gshd
ENSFHEG00000020125	prpf18	98	89.513	ENSCGRG00000014690	Prpf18	80	89.377	Cricetulus_griseus_crigri
ENSFHEG00000020125	prpf18	100	92.308	ENSCSEG00000005536	prpf18	80	92.308	Cynoglossus_semilaevis
ENSFHEG00000020125	prpf18	100	97.802	ENSCVAG00000012401	prpf18	80	97.802	Cyprinodon_variegatus
ENSFHEG00000020125	prpf18	98	91.386	ENSDARG00000058306	prpf18	80	91.575	Danio_rerio
ENSFHEG00000020125	prpf18	98	89.139	ENSDNOG00000035607	-	80	89.011	Dasypus_novemcinctus
ENSFHEG00000020125	prpf18	98	88.764	ENSDORG00000000858	Prpf18	80	88.645	Dipodomys_ordii
ENSFHEG00000020125	prpf18	96	54.789	FBgn0027784	Prp18	76	54.789	Drosophila_melanogaster
ENSFHEG00000020125	prpf18	98	85.768	ENSETEG00000015060	-	80	85.714	Echinops_telfairi
ENSFHEG00000020125	prpf18	98	74.906	ENSEBUG00000016502	prpf18	77	74.906	Eptatretus_burgeri
ENSFHEG00000020125	prpf18	98	89.139	ENSEASG00005019373	-	80	89.011	Equus_asinus_asinus
ENSFHEG00000020125	prpf18	98	89.139	ENSECAG00000006997	PRPF18	80	89.011	Equus_caballus
ENSFHEG00000020125	prpf18	65	100.000	ENSEEUG00000001171	-	56	100.000	Erinaceus_europaeus
ENSFHEG00000020125	prpf18	100	89.781	ENSELUG00000022190	prpf18	80	89.781	Esox_lucius
ENSFHEG00000020125	prpf18	98	89.139	ENSFCAG00000004436	-	80	89.011	Felis_catus
ENSFHEG00000020125	prpf18	88	87.552	ENSFALG00000001912	-	74	87.449	Ficedula_albicollis
ENSFHEG00000020125	prpf18	100	60.073	ENSFDAG00000010713	-	75	60.073	Fukomys_damarensis
ENSFHEG00000020125	prpf18	98	89.513	ENSFDAG00000014026	-	85	89.377	Fukomys_damarensis
ENSFHEG00000020125	prpf18	99	92.647	ENSGMOG00000012210	prpf18	80	92.647	Gadus_morhua
ENSFHEG00000020125	prpf18	98	87.640	ENSGALG00000043593	-	80	87.546	Gallus_gallus
ENSFHEG00000020125	prpf18	100	98.168	ENSGAFG00000006034	prpf18	80	98.168	Gambusia_affinis
ENSFHEG00000020125	prpf18	100	92.308	ENSGACG00000012232	prpf18	80	92.308	Gasterosteus_aculeatus
ENSFHEG00000020125	prpf18	98	88.390	ENSGAGG00000016878	-	80	88.278	Gopherus_agassizii
ENSFHEG00000020125	prpf18	88	89.212	ENSGGOG00000025188	-	75	89.069	Gorilla_gorilla
ENSFHEG00000020125	prpf18	98	94.757	ENSHBUG00000010264	prpf18	80	94.872	Haplochromis_burtoni
ENSFHEG00000020125	prpf18	98	89.139	ENSHGLG00000018534	PRPF18	80	89.011	Heterocephalus_glaber_female
ENSFHEG00000020125	prpf18	98	89.139	ENSHGLG00100012161	-	83	89.011	Heterocephalus_glaber_male
ENSFHEG00000020125	prpf18	98	95.131	ENSHCOG00000015987	prpf18	80	95.238	Hippocampus_comes
ENSFHEG00000020125	prpf18	98	89.139	ENSIPUG00000007432	prpf18	77	89.377	Ictalurus_punctatus
ENSFHEG00000020125	prpf18	98	89.139	ENSSTOG00000008735	-	80	89.011	Ictidomys_tridecemlineatus
ENSFHEG00000020125	prpf18	89	68.724	ENSJJAG00000015191	-	75	64.835	Jaculus_jaculus
ENSFHEG00000020125	prpf18	98	89.513	ENSJJAG00000024041	-	80	89.377	Jaculus_jaculus
ENSFHEG00000020125	prpf18	98	95.131	ENSKMAG00000012124	prpf18	80	95.238	Kryptolebias_marmoratus
ENSFHEG00000020125	prpf18	98	93.258	ENSLBEG00000028466	prpf18	81	93.407	Labrus_bergylta
ENSFHEG00000020125	prpf18	98	87.266	ENSLACG00000009885	prpf18	80	87.546	Latimeria_chalumnae
ENSFHEG00000020125	prpf18	98	89.888	ENSLOCG00000016736	prpf18	80	90.110	Lepisosteus_oculatus
ENSFHEG00000020125	prpf18	98	89.513	ENSLAFG00000007753	-	80	89.377	Loxodonta_africana
ENSFHEG00000020125	prpf18	98	89.513	ENSMFAG00000000540	-	80	89.377	Macaca_fascicularis
ENSFHEG00000020125	prpf18	98	89.513	ENSMMUG00000015071	PRPF18	93	90.066	Macaca_mulatta
ENSFHEG00000020125	prpf18	98	89.513	ENSMNEG00000024679	-	80	89.377	Macaca_nemestrina
ENSFHEG00000020125	prpf18	98	70.037	ENSMLEG00000031715	-	76	70.330	Mandrillus_leucophaeus
ENSFHEG00000020125	prpf18	98	94.007	ENSMAMG00000006610	prpf18	80	94.139	Mastacembelus_armatus
ENSFHEG00000020125	prpf18	98	94.757	ENSMZEG00005019392	prpf18	80	94.872	Maylandia_zebra
ENSFHEG00000020125	prpf18	98	87.640	ENSMGAG00000005023	-	80	87.546	Meleagris_gallopavo
ENSFHEG00000020125	prpf18	98	89.513	ENSMICG00000006572	-	80	89.377	Microcebus_murinus
ENSFHEG00000020125	prpf18	98	89.513	ENSMOCG00000021468	Prpf18	80	89.377	Microtus_ochrogaster
ENSFHEG00000020125	prpf18	98	94.382	ENSMMOG00000013012	prpf18	80	94.505	Mola_mola
ENSFHEG00000020125	prpf18	58	82.166	ENSMODG00000024051	-	99	82.166	Monodelphis_domestica
ENSFHEG00000020125	prpf18	99	81.250	ENSMODG00000024043	-	80	81.250	Monodelphis_domestica
ENSFHEG00000020125	prpf18	93	84.706	ENSMODG00000016902	-	71	84.674	Monodelphis_domestica
ENSFHEG00000020125	prpf18	98	92.135	ENSMALG00000005486	prpf18	79	92.674	Monopterus_albus
ENSFHEG00000020125	prpf18	98	89.513	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSFHEG00000020125	prpf18	98	89.513	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSFHEG00000020125	prpf18	98	89.513	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSFHEG00000020125	prpf18	98	89.513	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSFHEG00000020125	prpf18	98	89.139	ENSMPUG00000000938	-	80	89.011	Mustela_putorius_furo
ENSFHEG00000020125	prpf18	98	89.139	ENSMLUG00000009200	-	80	89.011	Myotis_lucifugus
ENSFHEG00000020125	prpf18	85	81.034	ENSNGAG00000023550	-	83	81.034	Nannospalax_galili
ENSFHEG00000020125	prpf18	97	89.434	ENSNGAG00000012500	-	80	89.011	Nannospalax_galili
ENSFHEG00000020125	prpf18	98	94.757	ENSNBRG00000001778	prpf18	80	94.872	Neolamprologus_brichardi
ENSFHEG00000020125	prpf18	98	89.513	ENSNLEG00000012186	-	80	89.377	Nomascus_leucogenys
ENSFHEG00000020125	prpf18	95	71.429	ENSMEUG00000005032	-	75	71.429	Notamacropus_eugenii
ENSFHEG00000020125	prpf18	53	79.167	ENSOPRG00000002153	-	74	64.796	Ochotona_princeps
ENSFHEG00000020125	prpf18	98	88.764	ENSODEG00000003770	-	80	88.645	Octodon_degus
ENSFHEG00000020125	prpf18	95	94.615	ENSONIG00000014854	prpf18	76	94.737	Oreochromis_niloticus
ENSFHEG00000020125	prpf18	98	88.764	ENSOANG00000015404	-	80	88.645	Ornithorhynchus_anatinus
ENSFHEG00000020125	prpf18	98	89.513	ENSOCUG00000027756	-	80	89.377	Oryctolagus_cuniculus
ENSFHEG00000020125	prpf18	98	95.131	ENSORLG00000010293	prpf18	78	95.238	Oryzias_latipes
ENSFHEG00000020125	prpf18	98	95.131	ENSORLG00020001530	prpf18	80	95.238	Oryzias_latipes_hni
ENSFHEG00000020125	prpf18	98	95.131	ENSORLG00015013705	prpf18	80	95.238	Oryzias_latipes_hsok
ENSFHEG00000020125	prpf18	98	94.382	ENSOMEG00000009167	prpf18	80	94.505	Oryzias_melastigma
ENSFHEG00000020125	prpf18	98	89.513	ENSOGAG00000007294	-	80	89.377	Otolemur_garnettii
ENSFHEG00000020125	prpf18	98	89.139	ENSOARG00000006243	-	80	89.011	Ovis_aries
ENSFHEG00000020125	prpf18	98	89.513	ENSPPAG00000041959	-	80	89.377	Pan_paniscus
ENSFHEG00000020125	prpf18	98	89.139	ENSPPRG00000000107	-	80	89.011	Panthera_pardus
ENSFHEG00000020125	prpf18	98	89.139	ENSPTIG00000021094	-	80	89.011	Panthera_tigris_altaica
ENSFHEG00000020125	prpf18	98	89.513	ENSPTRG00000002306	PRPF18	80	89.377	Pan_troglodytes
ENSFHEG00000020125	prpf18	98	89.139	ENSPANG00000023346	-	80	89.011	Papio_anubis
ENSFHEG00000020125	prpf18	98	90.637	ENSPKIG00000014128	prpf18	74	90.842	Paramormyrops_kingsleyae
ENSFHEG00000020125	prpf18	98	88.015	ENSPSIG00000016064	-	80	87.912	Pelodiscus_sinensis
ENSFHEG00000020125	prpf18	98	85.768	ENSPMGG00000016486	prpf18	79	86.081	Periophthalmus_magnuspinnatus
ENSFHEG00000020125	prpf18	98	89.513	ENSPEMG00000013704	Prpf18	80	89.377	Peromyscus_maniculatus_bairdii
ENSFHEG00000020125	prpf18	100	79.121	ENSPMAG00000000204	prpf18	79	79.121	Petromyzon_marinus
ENSFHEG00000020125	prpf18	88	88.382	ENSPCIG00000012963	-	77	88.259	Phascolarctos_cinereus
ENSFHEG00000020125	prpf18	100	98.168	ENSPFOG00000017611	prpf18	78	98.168	Poecilia_formosa
ENSFHEG00000020125	prpf18	100	98.168	ENSPLAG00000000369	prpf18	80	98.168	Poecilia_latipinna
ENSFHEG00000020125	prpf18	100	98.535	ENSPMEG00000005183	prpf18	80	98.535	Poecilia_mexicana
ENSFHEG00000020125	prpf18	98	96.629	ENSPREG00000015232	prpf18	80	96.703	Poecilia_reticulata
ENSFHEG00000020125	prpf18	98	89.513	ENSPPYG00000002101	PRPF18	80	89.377	Pongo_abelii
ENSFHEG00000020125	prpf18	98	66.667	ENSPCAG00000010833	-	80	67.033	Procavia_capensis
ENSFHEG00000020125	prpf18	98	89.513	ENSPCOG00000013057	-	86	89.377	Propithecus_coquereli
ENSFHEG00000020125	prpf18	81	55.455	ENSPVAG00000002947	-	80	49.451	Pteropus_vampyrus
ENSFHEG00000020125	prpf18	98	94.757	ENSPNYG00000003554	prpf18	80	94.872	Pundamilia_nyererei
ENSFHEG00000020125	prpf18	98	91.386	ENSPNAG00000023151	prpf18	78	91.575	Pygocentrus_nattereri
ENSFHEG00000020125	prpf18	98	89.513	ENSRNOG00000018396	Prpf18	80	89.377	Rattus_norvegicus
ENSFHEG00000020125	prpf18	98	89.513	ENSRBIG00000028028	-	80	89.377	Rhinopithecus_bieti
ENSFHEG00000020125	prpf18	98	89.513	ENSRROG00000040695	-	80	89.377	Rhinopithecus_roxellana
ENSFHEG00000020125	prpf18	98	89.513	ENSSBOG00000034482	-	80	89.377	Saimiri_boliviensis_boliviensis
ENSFHEG00000020125	prpf18	98	88.764	ENSSHAG00000016463	-	80	88.645	Sarcophilus_harrisii
ENSFHEG00000020125	prpf18	99	74.632	ENSSHAG00000009669	-	79	74.632	Sarcophilus_harrisii
ENSFHEG00000020125	prpf18	86	48.117	ENSSFOG00015021154	-	89	48.927	Scleropages_formosus
ENSFHEG00000020125	prpf18	95	90.385	ENSSFOG00015022118	prpf18	79	82.014	Scleropages_formosus
ENSFHEG00000020125	prpf18	99	93.750	ENSSMAG00000005308	prpf18	80	93.750	Scophthalmus_maximus
ENSFHEG00000020125	prpf18	98	95.131	ENSSDUG00000015428	prpf18	87	95.238	Seriola_dumerili
ENSFHEG00000020125	prpf18	98	94.757	ENSSLDG00000023989	prpf18	80	94.872	Seriola_lalandi_dorsalis
ENSFHEG00000020125	prpf18	98	53.933	ENSSARG00000005307	-	80	54.579	Sorex_araneus
ENSFHEG00000020125	prpf18	98	88.015	ENSSPUG00000002619	-	80	87.912	Sphenodon_punctatus
ENSFHEG00000020125	prpf18	98	95.131	ENSSPAG00000019502	prpf18	80	95.238	Stegastes_partitus
ENSFHEG00000020125	prpf18	98	89.139	ENSSSCG00000026354	-	80	89.011	Sus_scrofa
ENSFHEG00000020125	prpf18	98	88.015	ENSTGUG00000002286	-	80	87.912	Taeniopygia_guttata
ENSFHEG00000020125	prpf18	98	91.386	ENSTRUG00000011278	prpf18	80	91.575	Takifugu_rubripes
ENSFHEG00000020125	prpf18	98	90.262	ENSTNIG00000000911	prpf18	80	90.476	Tetraodon_nigroviridis
ENSFHEG00000020125	prpf18	72	97.436	ENSTBEG00000013011	-	59	97.436	Tupaia_belangeri
ENSFHEG00000020125	prpf18	98	89.513	ENSTTRG00000011117	PRPF18	80	89.377	Tursiops_truncatus
ENSFHEG00000020125	prpf18	98	89.139	ENSUAMG00000001815	-	81	89.011	Ursus_americanus
ENSFHEG00000020125	prpf18	98	83.146	ENSUMAG00000012329	-	79	83.150	Ursus_maritimus
ENSFHEG00000020125	prpf18	98	82.022	ENSVPAG00000011486	-	79	82.051	Vicugna_pacos
ENSFHEG00000020125	prpf18	98	89.139	ENSVVUG00000005453	-	80	89.011	Vulpes_vulpes
ENSFHEG00000020125	prpf18	98	83.521	ENSXETG00000024057	prpf18	77	83.521	Xenopus_tropicalis
ENSFHEG00000020125	prpf18	100	97.455	ENSXCOG00000020414	prpf18	80	97.455	Xiphophorus_couchianus
ENSFHEG00000020125	prpf18	100	98.168	ENSXMAG00000004713	prpf18	73	98.168	Xiphophorus_maculatus