EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000020307 (Gene tree)
Gene ID: 105939334
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: la-related protein 1-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 50152 bases
Position: chrKN811567.1:898166-948317
Accession: 105939334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000033232	La	PF05383.17	3e-21	1	1
ENSFHEP00000033250	La	PF05383.17	5.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000027344	-	993	-	ENSFHEP00000033232	330 (aa)	-	-
ENSFHET00000027396	-	1983	XM_012881444	ENSFHEP00000033250	660 (aa)	XP_012736898	-

Gene Model

Click here to download ENSFHEG00000020307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000020307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000020307	larp1	90	54.734	ENSFHEG00000010264	larp1b	53	47.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000020307	larp1	92	63.930	ENSG00000155506	LARP1	89	74.860	Homo_sapiens
ENSFHEG00000020307	larp1	92	89.251	ENSAPOG00000020685	larp1	70	84.544	Acanthochromis_polyacanthus
ENSFHEG00000020307	larp1	92	63.743	ENSAMEG00000016673	LARP1	59	57.895	Ailuropoda_melanoleuca
ENSFHEG00000020307	larp1	92	80.303	ENSACIG00000012994	larp1	61	69.494	Amphilophus_citrinellus
ENSFHEG00000020307	larp1	92	77.374	ENSAOCG00000007792	larp1	54	83.664	Amphiprion_ocellaris
ENSFHEG00000020307	larp1	97	80.876	ENSAPEG00000022246	larp1	63	81.168	Amphiprion_percula
ENSFHEG00000020307	larp1	92	79.880	ENSATEG00000013523	larp1	63	75.221	Anabas_testudineus
ENSFHEG00000020307	larp1	92	67.879	ENSAPLG00000007559	LARP1	63	62.970	Anas_platyrhynchos
ENSFHEG00000020307	larp1	92	69.207	ENSACAG00000004071	LARP1	52	68.831	Anolis_carolinensis
ENSFHEG00000020307	larp1	93	63.401	ENSANAG00000029949	LARP1	58	55.846	Aotus_nancymaae
ENSFHEG00000020307	larp1	97	78.571	ENSACLG00000015256	larp1	63	79.143	Astatotilapia_calliptera
ENSFHEG00000020307	larp1	92	76.205	ENSAMXG00000000859	larp1	64	71.108	Astyanax_mexicanus
ENSFHEG00000020307	larp1	92	63.450	ENSBTAG00000008443	LARP1	64	54.219	Bos_taurus
ENSFHEG00000020307	larp1	92	63.743	ENSCJAG00000004454	LARP1	64	53.942	Callithrix_jacchus
ENSFHEG00000020307	larp1	92	63.743	ENSCAFG00000017639	LARP1	59	57.895	Canis_familiaris
ENSFHEG00000020307	larp1	92	63.743	ENSCAFG00020023860	LARP1	55	59.639	Canis_lupus_dingo
ENSFHEG00000020307	larp1	92	63.343	ENSCHIG00000014414	LARP1	64	51.778	Capra_hircus
ENSFHEG00000020307	larp1	92	63.743	ENSTSYG00000013732	LARP1	57	56.752	Carlito_syrichta
ENSFHEG00000020307	larp1	92	58.480	ENSCAPG00000013865	LARP1	51	54.581	Cavia_aperea
ENSFHEG00000020307	larp1	92	64.223	ENSCPOG00000003377	LARP1	59	58.230	Cavia_porcellus
ENSFHEG00000020307	larp1	92	63.743	ENSCCAG00000025201	LARP1	64	54.080	Cebus_capucinus
ENSFHEG00000020307	larp1	92	63.743	ENSCATG00000030675	LARP1	63	52.654	Cercocebus_atys
ENSFHEG00000020307	larp1	92	64.223	ENSCLAG00000012755	LARP1	57	57.672	Chinchilla_lanigera
ENSFHEG00000020307	larp1	92	63.743	ENSCSAG00000010800	LARP1	53	58.281	Chlorocebus_sabaeus
ENSFHEG00000020307	larp1	75	59.441	ENSCHOG00000012716	LARP1	53	61.149	Choloepus_hoffmanni
ENSFHEG00000020307	larp1	92	69.207	ENSCPBG00000002173	LARP1	55	65.825	Chrysemys_picta_bellii
ENSFHEG00000020307	larp1	74	44.803	ENSCSAVG00000008913	-	99	45.878	Ciona_savignyi
ENSFHEG00000020307	larp1	92	63.930	ENSCANG00000037418	LARP1	55	57.544	Colobus_angolensis_palliatus
ENSFHEG00000020307	larp1	92	62.865	ENSCGRG00001016913	Larp1	63	52.766	Cricetulus_griseus_chok1gshd
ENSFHEG00000020307	larp1	92	62.281	ENSCGRG00000009916	Larp1	61	55.179	Cricetulus_griseus_crigri
ENSFHEG00000020307	larp1	97	76.845	ENSCSEG00000016431	larp1	63	76.667	Cynoglossus_semilaevis
ENSFHEG00000020307	larp1	97	81.525	ENSCVAG00000022687	larp1	63	81.232	Cyprinodon_variegatus
ENSFHEG00000020307	larp1	92	70.091	ENSDARG00000101722	larp1	55	68.345	Danio_rerio
ENSFHEG00000020307	larp1	92	64.035	ENSDNOG00000012073	LARP1	64	54.357	Dasypus_novemcinctus
ENSFHEG00000020307	larp1	92	63.343	ENSDORG00000002897	Larp1	56	56.410	Dipodomys_ordii
ENSFHEG00000020307	larp1	92	63.158	ENSETEG00000020251	LARP1	63	57.726	Echinops_telfairi
ENSFHEG00000020307	larp1	92	64.035	ENSEASG00005001070	LARP1	64	53.931	Equus_asinus_asinus
ENSFHEG00000020307	larp1	92	64.035	ENSECAG00000017002	LARP1	54	53.931	Equus_caballus
ENSFHEG00000020307	larp1	92	55.848	ENSEEUG00000001065	LARP1	58	52.930	Erinaceus_europaeus
ENSFHEG00000020307	larp1	97	66.525	ENSELUG00000019403	larp1	64	68.085	Esox_lucius
ENSFHEG00000020307	larp1	93	63.401	ENSFCAG00000000592	LARP1	64	54.596	Felis_catus
ENSFHEG00000020307	larp1	92	67.976	ENSFALG00000008335	LARP1	51	63.679	Ficedula_albicollis
ENSFHEG00000020307	larp1	92	63.930	ENSFDAG00000021125	LARP1	59	57.774	Fukomys_damarensis
ENSFHEG00000020307	larp1	92	69.375	ENSGALG00000040109	LARP1	62	59.763	Gallus_gallus
ENSFHEG00000020307	larp1	92	81.046	ENSGAFG00000007322	larp1	90	83.914	Gambusia_affinis
ENSFHEG00000020307	larp1	92	68.902	ENSGAGG00000025113	LARP1	62	61.103	Gopherus_agassizii
ENSFHEG00000020307	larp1	92	63.636	ENSGGOG00000006048	LARP1	55	57.496	Gorilla_gorilla
ENSFHEG00000020307	larp1	97	79.712	ENSHBUG00000020762	larp1	63	79.712	Haplochromis_burtoni
ENSFHEG00000020307	larp1	92	63.636	ENSHGLG00000006267	LARP1	64	52.150	Heterocephalus_glaber_female
ENSFHEG00000020307	larp1	82	57.143	ENSHGLG00100003395	-	54	49.829	Heterocephalus_glaber_male
ENSFHEG00000020307	larp1	92	63.636	ENSHGLG00100014230	-	59	57.143	Heterocephalus_glaber_male
ENSFHEG00000020307	larp1	81	67.314	ENSHCOG00000010786	larp1	59	75.758	Hippocampus_comes
ENSFHEG00000020307	larp1	92	73.313	ENSIPUG00000019105	Larp1	57	74.597	Ictalurus_punctatus
ENSFHEG00000020307	larp1	92	63.743	ENSSTOG00000005678	LARP1	57	55.496	Ictidomys_tridecemlineatus
ENSFHEG00000020307	larp1	92	56.287	ENSJJAG00000016950	Larp1	63	48.266	Jaculus_jaculus
ENSFHEG00000020307	larp1	97	79.386	ENSKMAG00000018468	larp1	63	79.386	Kryptolebias_marmoratus
ENSFHEG00000020307	larp1	97	78.382	ENSLBEG00000027172	larp1	63	77.843	Labrus_bergylta
ENSFHEG00000020307	larp1	97	68.919	ENSLOCG00000012457	larp1	65	69.820	Lepisosteus_oculatus
ENSFHEG00000020307	larp1	92	63.158	ENSLAFG00000008991	LARP1	64	53.699	Loxodonta_africana
ENSFHEG00000020307	larp1	92	63.743	ENSMFAG00000031651	LARP1	55	57.368	Macaca_fascicularis
ENSFHEG00000020307	larp1	92	63.743	ENSMMUG00000009411	LARP1	99	55.060	Macaca_mulatta
ENSFHEG00000020307	larp1	92	63.743	ENSMNEG00000039294	LARP1	55	59.476	Macaca_nemestrina
ENSFHEG00000020307	larp1	92	63.743	ENSMLEG00000035142	LARP1	55	57.719	Mandrillus_leucophaeus
ENSFHEG00000020307	larp1	97	76.338	ENSMAMG00000021788	larp1	64	76.096	Mastacembelus_armatus
ENSFHEG00000020307	larp1	97	78.571	ENSMZEG00005009345	larp1	63	79.143	Maylandia_zebra
ENSFHEG00000020307	larp1	92	67.576	ENSMGAG00000005696	LARP1	57	65.485	Meleagris_gallopavo
ENSFHEG00000020307	larp1	92	62.865	ENSMAUG00000001385	Larp1	63	52.691	Mesocricetus_auratus
ENSFHEG00000020307	larp1	94	62.571	ENSMICG00000000837	LARP1	59	56.667	Microcebus_murinus
ENSFHEG00000020307	larp1	92	62.865	ENSMOCG00000008920	Larp1	63	52.793	Microtus_ochrogaster
ENSFHEG00000020307	larp1	92	79.641	ENSMMOG00000013364	larp1	68	69.231	Mola_mola
ENSFHEG00000020307	larp1	92	65.588	ENSMODG00000008663	LARP1	58	63.167	Monodelphis_domestica
ENSFHEG00000020307	larp1	92	81.707	ENSMALG00000017180	larp1	63	75.779	Monopterus_albus
ENSFHEG00000020307	larp1	92	62.573	MGP_CAROLIEiJ_G0016383	Larp1	63	53.191	Mus_caroli
ENSFHEG00000020307	larp1	92	62.865	ENSMUSG00000037331	Larp1	63	53.333	Mus_musculus
ENSFHEG00000020307	larp1	92	62.865	MGP_PahariEiJ_G0017518	Larp1	64	52.975	Mus_pahari
ENSFHEG00000020307	larp1	92	62.865	MGP_SPRETEiJ_G0017225	Larp1	63	53.333	Mus_spretus
ENSFHEG00000020307	larp1	92	63.636	ENSMPUG00000013564	LARP1	78	54.069	Mustela_putorius_furo
ENSFHEG00000020307	larp1	92	62.865	ENSMLUG00000002608	LARP1	59	57.193	Myotis_lucifugus
ENSFHEG00000020307	larp1	92	63.450	ENSNGAG00000001098	Larp1	57	55.797	Nannospalax_galili
ENSFHEG00000020307	larp1	92	84.424	ENSNBRG00000008963	larp1	60	86.949	Neolamprologus_brichardi
ENSFHEG00000020307	larp1	93	63.401	ENSNLEG00000016588	LARP1	56	56.000	Nomascus_leucogenys
ENSFHEG00000020307	larp1	92	67.296	ENSMEUG00000002957	LARP1	57	58.899	Notamacropus_eugenii
ENSFHEG00000020307	larp1	92	63.450	ENSOPRG00000013014	LARP1	59	57.496	Ochotona_princeps
ENSFHEG00000020307	larp1	92	63.930	ENSODEG00000010824	LARP1	59	57.319	Octodon_degus
ENSFHEG00000020307	larp1	97	77.966	ENSONIG00000017308	larp1	64	78.531	Oreochromis_niloticus
ENSFHEG00000020307	larp1	92	64.638	ENSOANG00000005096	LARP1	60	61.102	Ornithorhynchus_anatinus
ENSFHEG00000020307	larp1	92	63.743	ENSOCUG00000013066	LARP1	64	53.955	Oryctolagus_cuniculus
ENSFHEG00000020307	larp1	92	81.790	ENSORLG00000000824	larp1	63	76.453	Oryzias_latipes
ENSFHEG00000020307	larp1	97	76.633	ENSORLG00020022241	larp1	63	76.676	Oryzias_latipes_hni
ENSFHEG00000020307	larp1	97	76.686	ENSORLG00015007538	larp1	63	74.963	Oryzias_latipes_hsok
ENSFHEG00000020307	larp1	97	77.419	ENSOMEG00000003134	larp1	63	74.780	Oryzias_melastigma
ENSFHEG00000020307	larp1	92	63.743	ENSOGAG00000016750	LARP1	59	57.848	Otolemur_garnettii
ENSFHEG00000020307	larp1	92	63.158	ENSOARG00000009893	LARP1	59	56.460	Ovis_aries
ENSFHEG00000020307	larp1	92	63.636	ENSPPAG00000042993	LARP1	55	57.193	Pan_paniscus
ENSFHEG00000020307	larp1	93	63.401	ENSPPRG00000009780	LARP1	55	56.415	Panthera_pardus
ENSFHEG00000020307	larp1	92	63.743	ENSPTIG00000007013	LARP1	55	57.319	Panthera_tigris_altaica
ENSFHEG00000020307	larp1	92	63.636	ENSPTRG00000017447	LARP1	63	51.937	Pan_troglodytes
ENSFHEG00000020307	larp1	92	63.743	ENSPANG00000008080	LARP1	63	52.654	Papio_anubis
ENSFHEG00000020307	larp1	97	71.154	ENSPKIG00000010096	larp1	63	70.441	Paramormyrops_kingsleyae
ENSFHEG00000020307	larp1	92	70.642	ENSPKIG00000017153	-	66	59.881	Paramormyrops_kingsleyae
ENSFHEG00000020307	larp1	97	73.547	ENSPMGG00000011599	larp1	62	73.853	Periophthalmus_magnuspinnatus
ENSFHEG00000020307	larp1	92	62.865	ENSPEMG00000022523	Larp1	57	56.000	Peromyscus_maniculatus_bairdii
ENSFHEG00000020307	larp1	97	63.687	ENSPCIG00000019242	LARP1	59	56.742	Phascolarctos_cinereus
ENSFHEG00000020307	larp1	97	78.955	ENSPFOG00000005836	larp1	64	77.966	Poecilia_formosa
ENSFHEG00000020307	larp1	97	82.258	ENSPLAG00000008936	larp1	63	81.525	Poecilia_latipinna
ENSFHEG00000020307	larp1	97	78.814	ENSPMEG00000013656	larp1	64	77.542	Poecilia_mexicana
ENSFHEG00000020307	larp1	92	74.074	ENSPREG00000005726	larp1	58	78.846	Poecilia_reticulata
ENSFHEG00000020307	larp1	92	59.763	ENSPCAG00000006407	LARP1	59	55.674	Procavia_capensis
ENSFHEG00000020307	larp1	92	63.743	ENSPCOG00000016949	LARP1	62	58.025	Propithecus_coquereli
ENSFHEG00000020307	larp1	92	64.035	ENSPVAG00000002262	LARP1	64	53.931	Pteropus_vampyrus
ENSFHEG00000020307	larp1	97	78.429	ENSPNYG00000007938	larp1	63	79.429	Pundamilia_nyererei
ENSFHEG00000020307	larp1	92	75.375	ENSPNAG00000021427	larp1	63	69.896	Pygocentrus_nattereri
ENSFHEG00000020307	larp1	92	63.743	ENSRNOG00000031544	Larp1	57	56.387	Rattus_norvegicus
ENSFHEG00000020307	larp1	92	63.743	ENSRBIG00000038005	LARP1	57	56.061	Rhinopithecus_bieti
ENSFHEG00000020307	larp1	92	63.743	ENSRROG00000034073	LARP1	55	59.879	Rhinopithecus_roxellana
ENSFHEG00000020307	larp1	92	63.743	ENSSBOG00000019816	LARP1	59	55.960	Saimiri_boliviensis_boliviensis
ENSFHEG00000020307	larp1	92	66.469	ENSSHAG00000011115	LARP1	58	63.669	Sarcophilus_harrisii
ENSFHEG00000020307	larp1	92	72.050	ENSSFOG00015018058	-	62	66.112	Scleropages_formosus
ENSFHEG00000020307	larp1	92	69.653	ENSSFOG00015020304	larp1	56	70.261	Scleropages_formosus
ENSFHEG00000020307	larp1	97	80.967	ENSSMAG00000007468	larp1	65	81.487	Scophthalmus_maximus
ENSFHEG00000020307	larp1	97	77.254	ENSSDUG00000000268	larp1	64	77.670	Seriola_dumerili
ENSFHEG00000020307	larp1	92	81.065	ENSSLDG00000016505	larp1	53	78.826	Seriola_lalandi_dorsalis
ENSFHEG00000020307	larp1	92	67.976	ENSSPUG00000012179	-	64	59.091	Sphenodon_punctatus
ENSFHEG00000020307	larp1	97	78.551	ENSSPAG00000003910	larp1	64	78.917	Stegastes_partitus
ENSFHEG00000020307	larp1	92	63.636	ENSSSCG00000017069	LARP1	64	53.867	Sus_scrofa
ENSFHEG00000020307	larp1	92	64.928	ENSTGUG00000000704	LARP1	61	62.522	Taeniopygia_guttata
ENSFHEG00000020307	larp1	97	78.979	ENSTRUG00000009470	larp1	62	78.733	Takifugu_rubripes
ENSFHEG00000020307	larp1	92	57.941	ENSTBEG00000003381	LARP1	63	53.968	Tupaia_belangeri
ENSFHEG00000020307	larp1	92	63.743	ENSTTRG00000015934	LARP1	59	57.143	Tursiops_truncatus
ENSFHEG00000020307	larp1	92	63.450	ENSUAMG00000019334	LARP1	64	54.207	Ursus_americanus
ENSFHEG00000020307	larp1	92	65.758	ENSUMAG00000002934	LARP1	59	59.328	Ursus_maritimus
ENSFHEG00000020307	larp1	92	63.743	ENSVVUG00000004644	LARP1	55	59.639	Vulpes_vulpes
ENSFHEG00000020307	larp1	92	66.864	ENSXETG00000008413	larp1	56	61.014	Xenopus_tropicalis
ENSFHEG00000020307	larp1	92	80.564	ENSXCOG00000004022	larp1	54	84.923	Xiphophorus_couchianus
ENSFHEG00000020307	larp1	97	78.359	ENSXMAG00000018780	larp1	63	77.086	Xiphophorus_maculatus