EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000020623 (Gene tree)
Gene ID: 105919753
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 14870 bases
Position: chrKN805993.1:1762994-1777863
Accession: 105919753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000018679	Suf	PF05843.14	8.4e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000034473	-	2889	XM_012855134	ENSFHEP00000018679	716 (aa)	XP_012710588	UPI000644875C

Gene Model

Click here to download ENSFHEG00000020623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000020623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000020623	cstf3	100	90.390	ENSG00000176102	CSTF3	100	90.390	Homo_sapiens
ENSFHEG00000020623	cstf3	100	96.927	ENSAPOG00000014054	cstf3	100	96.927	Acanthochromis_polyacanthus
ENSFHEG00000020623	cstf3	99	90.819	ENSAMEG00000007187	CSTF3	98	90.819	Ailuropoda_melanoleuca
ENSFHEG00000020623	cstf3	87	91.493	ENSACIG00000005539	cstf3	100	91.493	Amphilophus_citrinellus
ENSFHEG00000020623	cstf3	100	96.788	ENSAOCG00000010930	cstf3	100	96.788	Amphiprion_ocellaris
ENSFHEG00000020623	cstf3	100	96.788	ENSAPEG00000007903	cstf3	100	96.788	Amphiprion_percula
ENSFHEG00000020623	cstf3	100	96.508	ENSATEG00000000190	cstf3	100	96.508	Anabas_testudineus
ENSFHEG00000020623	cstf3	99	90.960	ENSAPLG00000007217	CSTF3	100	90.960	Anas_platyrhynchos
ENSFHEG00000020623	cstf3	100	90.808	ENSACAG00000002823	CSTF3	100	90.808	Anolis_carolinensis
ENSFHEG00000020623	cstf3	100	90.390	ENSANAG00000020699	CSTF3	100	90.400	Aotus_nancymaae
ENSFHEG00000020623	cstf3	100	96.369	ENSACLG00000007820	cstf3	100	96.369	Astatotilapia_calliptera
ENSFHEG00000020623	cstf3	100	91.365	ENSAMXG00000014198	cstf3	100	91.643	Astyanax_mexicanus
ENSFHEG00000020623	cstf3	100	90.390	ENSBTAG00000008617	CSTF3	100	90.653	Bos_taurus
ENSFHEG00000020623	cstf3	97	47.891	WBGene00006307	suf-1	99	47.891	Caenorhabditis_elegans
ENSFHEG00000020623	cstf3	100	90.390	ENSCJAG00000005533	CSTF3	100	90.400	Callithrix_jacchus
ENSFHEG00000020623	cstf3	100	90.390	ENSCAFG00000007264	CSTF3	100	90.390	Canis_familiaris
ENSFHEG00000020623	cstf3	99	90.960	ENSCAFG00020002715	CSTF3	98	90.960	Canis_lupus_dingo
ENSFHEG00000020623	cstf3	98	89.474	ENSCHIG00000016418	CSTF3	100	90.400	Capra_hircus
ENSFHEG00000020623	cstf3	99	91.102	ENSTSYG00000000451	CSTF3	99	95.768	Carlito_syrichta
ENSFHEG00000020623	cstf3	83	87.915	ENSCAPG00000010958	CSTF3	98	87.915	Cavia_aperea
ENSFHEG00000020623	cstf3	100	90.529	ENSCPOG00000005545	CSTF3	100	90.529	Cavia_porcellus
ENSFHEG00000020623	cstf3	100	90.390	ENSCCAG00000024790	CSTF3	96	95.768	Cebus_capucinus
ENSFHEG00000020623	cstf3	100	90.390	ENSCATG00000007080	CSTF3	100	90.400	Cercocebus_atys
ENSFHEG00000020623	cstf3	100	90.390	ENSCLAG00000016179	CSTF3	100	90.390	Chinchilla_lanigera
ENSFHEG00000020623	cstf3	78	95.865	ENSCHOG00000002497	CSTF3	79	95.865	Choloepus_hoffmanni
ENSFHEG00000020623	cstf3	100	90.390	ENSCPBG00000006753	CSTF3	100	90.390	Chrysemys_picta_bellii
ENSFHEG00000020623	cstf3	99	61.997	ENSCING00000006401	-	99	61.997	Ciona_intestinalis
ENSFHEG00000020623	cstf3	98	61.322	ENSCSAVG00000004851	-	100	61.322	Ciona_savignyi
ENSFHEG00000020623	cstf3	100	90.390	ENSCANG00000035468	CSTF3	100	90.400	Colobus_angolensis_palliatus
ENSFHEG00000020623	cstf3	100	90.251	ENSCGRG00001014773	Cstf3	100	90.251	Cricetulus_griseus_chok1gshd
ENSFHEG00000020623	cstf3	100	90.251	ENSCGRG00000004142	Cstf3	100	90.251	Cricetulus_griseus_crigri
ENSFHEG00000020623	cstf3	100	95.810	ENSCSEG00000014283	cstf3	100	95.810	Cynoglossus_semilaevis
ENSFHEG00000020623	cstf3	100	98.464	ENSCVAG00000019739	cstf3	100	98.464	Cyprinodon_variegatus
ENSFHEG00000020623	cstf3	100	92.887	ENSDARG00000018904	cstf3	100	92.887	Danio_rerio
ENSFHEG00000020623	cstf3	99	90.490	ENSDNOG00000007366	CSTF3	99	90.490	Dasypus_novemcinctus
ENSFHEG00000020623	cstf3	99	82.657	ENSDORG00000005898	Cstf3	100	82.657	Dipodomys_ordii
ENSFHEG00000020623	cstf3	99	55.814	FBgn0003559	su(f)	99	55.814	Drosophila_melanogaster
ENSFHEG00000020623	cstf3	89	85.202	ENSETEG00000017097	CSTF3	90	85.202	Echinops_telfairi
ENSFHEG00000020623	cstf3	84	73.632	ENSEBUG00000015459	cstf3	96	73.632	Eptatretus_burgeri
ENSFHEG00000020623	cstf3	99	89.548	ENSEASG00005019884	CSTF3	96	95.768	Equus_asinus_asinus
ENSFHEG00000020623	cstf3	99	89.548	ENSECAG00000023338	CSTF3	96	95.768	Equus_caballus
ENSFHEG00000020623	cstf3	100	85.515	ENSEEUG00000015167	CSTF3	100	85.515	Erinaceus_europaeus
ENSFHEG00000020623	cstf3	100	94.003	ENSELUG00000023393	cstf3	100	94.003	Esox_lucius
ENSFHEG00000020623	cstf3	100	90.390	ENSFCAG00000030711	CSTF3	100	90.390	Felis_catus
ENSFHEG00000020623	cstf3	94	91.691	ENSFALG00000010764	CSTF3	100	89.862	Ficedula_albicollis
ENSFHEG00000020623	cstf3	100	90.390	ENSFDAG00000012082	CSTF3	100	90.390	Fukomys_damarensis
ENSFHEG00000020623	cstf3	100	93.454	ENSGMOG00000012275	cstf3	100	93.454	Gadus_morhua
ENSFHEG00000020623	cstf3	100	90.251	ENSGALG00000011685	CSTF3	100	90.251	Gallus_gallus
ENSFHEG00000020623	cstf3	100	98.603	ENSGAFG00000002181	cstf3	100	98.603	Gambusia_affinis
ENSFHEG00000020623	cstf3	100	95.391	ENSGACG00000015997	cstf3	100	95.391	Gasterosteus_aculeatus
ENSFHEG00000020623	cstf3	100	90.390	ENSGAGG00000006200	CSTF3	100	90.390	Gopherus_agassizii
ENSFHEG00000020623	cstf3	99	85.169	ENSGGOG00000026591	CSTF3	96	90.869	Gorilla_gorilla
ENSFHEG00000020623	cstf3	100	96.508	ENSHBUG00000016656	cstf3	100	96.508	Haplochromis_burtoni
ENSFHEG00000020623	cstf3	100	90.390	ENSHGLG00000017834	CSTF3	100	90.390	Heterocephalus_glaber_female
ENSFHEG00000020623	cstf3	100	90.390	ENSHGLG00100018042	CSTF3	100	90.390	Heterocephalus_glaber_male
ENSFHEG00000020623	cstf3	100	92.318	ENSHCOG00000015218	cstf3	100	92.318	Hippocampus_comes
ENSFHEG00000020623	cstf3	100	92.190	ENSIPUG00000013170	CSTF3	100	92.190	Ictalurus_punctatus
ENSFHEG00000020623	cstf3	100	90.390	ENSSTOG00000013306	CSTF3	100	90.390	Ictidomys_tridecemlineatus
ENSFHEG00000020623	cstf3	99	80.791	ENSJJAG00000018430	Cstf3	98	80.791	Jaculus_jaculus
ENSFHEG00000020623	cstf3	100	94.553	ENSKMAG00000010916	cstf3	100	94.553	Kryptolebias_marmoratus
ENSFHEG00000020623	cstf3	100	95.531	ENSLBEG00000002306	cstf3	100	95.531	Labrus_bergylta
ENSFHEG00000020623	cstf3	100	89.261	ENSLACG00000017296	CSTF3	100	89.261	Latimeria_chalumnae
ENSFHEG00000020623	cstf3	100	93.175	ENSLOCG00000004415	cstf3	100	93.175	Lepisosteus_oculatus
ENSFHEG00000020623	cstf3	100	90.251	ENSLAFG00000008712	CSTF3	100	90.251	Loxodonta_africana
ENSFHEG00000020623	cstf3	100	90.390	ENSMFAG00000029516	CSTF3	100	90.400	Macaca_fascicularis
ENSFHEG00000020623	cstf3	100	90.390	ENSMMUG00000002542	CSTF3	100	90.390	Macaca_mulatta
ENSFHEG00000020623	cstf3	100	90.390	ENSMNEG00000021807	CSTF3	100	90.400	Macaca_nemestrina
ENSFHEG00000020623	cstf3	100	90.390	ENSMLEG00000039594	CSTF3	97	93.541	Mandrillus_leucophaeus
ENSFHEG00000020623	cstf3	100	96.229	ENSMAMG00000020423	cstf3	100	96.229	Mastacembelus_armatus
ENSFHEG00000020623	cstf3	100	96.369	ENSMZEG00005012082	cstf3	100	96.369	Maylandia_zebra
ENSFHEG00000020623	cstf3	100	90.111	ENSMGAG00000001383	CSTF3	100	90.111	Meleagris_gallopavo
ENSFHEG00000020623	cstf3	100	90.111	ENSMAUG00000002487	Cstf3	100	90.111	Mesocricetus_auratus
ENSFHEG00000020623	cstf3	100	90.251	ENSMICG00000004784	CSTF3	100	90.251	Microcebus_murinus
ENSFHEG00000020623	cstf3	100	90.251	ENSMOCG00000017583	Cstf3	100	90.251	Microtus_ochrogaster
ENSFHEG00000020623	cstf3	99	96.186	ENSMMOG00000016026	cstf3	95	96.186	Mola_mola
ENSFHEG00000020623	cstf3	100	79.944	ENSMODG00000025205	-	100	79.944	Monodelphis_domestica
ENSFHEG00000020623	cstf3	100	90.529	ENSMODG00000009745	-	100	90.529	Monodelphis_domestica
ENSFHEG00000020623	cstf3	100	97.067	ENSMALG00000012050	cstf3	100	97.067	Monopterus_albus
ENSFHEG00000020623	cstf3	100	90.251	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.251	Mus_caroli
ENSFHEG00000020623	cstf3	100	90.251	ENSMUSG00000027176	Cstf3	100	90.251	Mus_musculus
ENSFHEG00000020623	cstf3	100	90.251	MGP_PahariEiJ_G0025464	Cstf3	100	90.251	Mus_pahari
ENSFHEG00000020623	cstf3	100	90.251	MGP_SPRETEiJ_G0024939	Cstf3	100	90.251	Mus_spretus
ENSFHEG00000020623	cstf3	100	90.251	ENSMPUG00000011457	CSTF3	100	90.251	Mustela_putorius_furo
ENSFHEG00000020623	cstf3	100	88.022	ENSMLUG00000026022	-	100	88.022	Myotis_lucifugus
ENSFHEG00000020623	cstf3	99	90.960	ENSMLUG00000003073	-	99	90.960	Myotis_lucifugus
ENSFHEG00000020623	cstf3	100	90.251	ENSNGAG00000010677	Cstf3	100	90.251	Nannospalax_galili
ENSFHEG00000020623	cstf3	87	96.469	ENSNBRG00000007345	cstf3	100	96.469	Neolamprologus_brichardi
ENSFHEG00000020623	cstf3	100	90.390	ENSNLEG00000017901	CSTF3	100	90.400	Nomascus_leucogenys
ENSFHEG00000020623	cstf3	73	89.484	ENSMEUG00000005640	-	100	89.484	Notamacropus_eugenii
ENSFHEG00000020623	cstf3	67	88.158	ENSOPRG00000000199	-	67	88.158	Ochotona_princeps
ENSFHEG00000020623	cstf3	100	90.251	ENSODEG00000016737	-	100	90.251	Octodon_degus
ENSFHEG00000020623	cstf3	89	78.774	ENSODEG00000006311	-	97	78.774	Octodon_degus
ENSFHEG00000020623	cstf3	100	96.369	ENSONIG00000005563	cstf3	100	96.369	Oreochromis_niloticus
ENSFHEG00000020623	cstf3	90	90.000	ENSOANG00000015140	CSTF3	100	90.000	Ornithorhynchus_anatinus
ENSFHEG00000020623	cstf3	100	90.111	ENSOCUG00000015417	CSTF3	100	90.111	Oryctolagus_cuniculus
ENSFHEG00000020623	cstf3	100	95.670	ENSORLG00000009762	cstf3	100	95.670	Oryzias_latipes
ENSFHEG00000020623	cstf3	100	95.670	ENSORLG00020005540	cstf3	100	95.670	Oryzias_latipes_hni
ENSFHEG00000020623	cstf3	100	95.531	ENSORLG00015003551	cstf3	100	95.531	Oryzias_latipes_hsok
ENSFHEG00000020623	cstf3	100	95.950	ENSOMEG00000003848	cstf3	100	95.950	Oryzias_melastigma
ENSFHEG00000020623	cstf3	100	90.014	ENSOGAG00000010229	CSTF3	100	90.014	Otolemur_garnettii
ENSFHEG00000020623	cstf3	90	90.513	ENSOARG00000017271	CSTF3	99	90.513	Ovis_aries
ENSFHEG00000020623	cstf3	99	87.571	ENSPPAG00000027358	CSTF3	99	87.571	Pan_paniscus
ENSFHEG00000020623	cstf3	100	90.390	ENSPPRG00000016852	CSTF3	100	90.390	Panthera_pardus
ENSFHEG00000020623	cstf3	100	90.390	ENSPTIG00000008716	CSTF3	100	90.390	Panthera_tigris_altaica
ENSFHEG00000020623	cstf3	100	90.390	ENSPTRG00000003485	CSTF3	100	90.390	Pan_troglodytes
ENSFHEG00000020623	cstf3	100	90.390	ENSPANG00000013722	CSTF3	97	93.541	Papio_anubis
ENSFHEG00000020623	cstf3	100	93.166	ENSPKIG00000023648	cstf3	100	93.166	Paramormyrops_kingsleyae
ENSFHEG00000020623	cstf3	100	90.390	ENSPSIG00000009173	CSTF3	100	90.390	Pelodiscus_sinensis
ENSFHEG00000020623	cstf3	77	96.533	ENSPMGG00000000164	cstf3	99	96.533	Periophthalmus_magnuspinnatus
ENSFHEG00000020623	cstf3	100	90.111	ENSPEMG00000011481	Cstf3	100	90.111	Peromyscus_maniculatus_bairdii
ENSFHEG00000020623	cstf3	99	79.155	ENSPMAG00000007282	cstf3	100	78.750	Petromyzon_marinus
ENSFHEG00000020623	cstf3	99	76.017	ENSPCIG00000030419	-	89	76.297	Phascolarctos_cinereus
ENSFHEG00000020623	cstf3	100	87.900	ENSPCIG00000026406	-	100	90.880	Phascolarctos_cinereus
ENSFHEG00000020623	cstf3	100	98.603	ENSPFOG00000017239	cstf3	100	98.603	Poecilia_formosa
ENSFHEG00000020623	cstf3	100	98.743	ENSPLAG00000009456	cstf3	100	98.743	Poecilia_latipinna
ENSFHEG00000020623	cstf3	100	98.603	ENSPMEG00000010320	cstf3	100	98.603	Poecilia_mexicana
ENSFHEG00000020623	cstf3	100	98.464	ENSPREG00000013549	cstf3	100	98.464	Poecilia_reticulata
ENSFHEG00000020623	cstf3	100	90.390	ENSPPYG00000003375	CSTF3	100	90.390	Pongo_abelii
ENSFHEG00000020623	cstf3	71	95.122	ENSPCAG00000008025	-	71	95.122	Procavia_capensis
ENSFHEG00000020623	cstf3	100	85.515	ENSPCOG00000014417	CSTF3	100	85.515	Propithecus_coquereli
ENSFHEG00000020623	cstf3	100	85.237	ENSPVAG00000002350	CSTF3	100	85.237	Pteropus_vampyrus
ENSFHEG00000020623	cstf3	100	96.508	ENSPNYG00000018259	cstf3	100	96.508	Pundamilia_nyererei
ENSFHEG00000020623	cstf3	100	93.166	ENSPNAG00000020182	cstf3	100	93.166	Pygocentrus_nattereri
ENSFHEG00000020623	cstf3	87	89.920	ENSRNOG00000012089	Cstf3	100	89.920	Rattus_norvegicus
ENSFHEG00000020623	cstf3	99	89.548	ENSRBIG00000044258	CSTF3	100	90.400	Rhinopithecus_bieti
ENSFHEG00000020623	cstf3	100	90.390	ENSRROG00000043450	CSTF3	100	90.400	Rhinopithecus_roxellana
ENSFHEG00000020623	cstf3	100	90.390	ENSSBOG00000024764	CSTF3	98	95.768	Saimiri_boliviensis_boliviensis
ENSFHEG00000020623	cstf3	100	81.337	ENSSHAG00000003135	-	99	81.337	Sarcophilus_harrisii
ENSFHEG00000020623	cstf3	99	90.629	ENSSHAG00000018128	-	99	90.629	Sarcophilus_harrisii
ENSFHEG00000020623	cstf3	100	93.584	ENSSFOG00015022133	cstf3	100	93.584	Scleropages_formosus
ENSFHEG00000020623	cstf3	100	95.810	ENSSMAG00000002197	cstf3	100	95.810	Scophthalmus_maximus
ENSFHEG00000020623	cstf3	100	96.927	ENSSDUG00000020426	cstf3	100	96.927	Seriola_dumerili
ENSFHEG00000020623	cstf3	100	96.927	ENSSLDG00000025649	cstf3	100	96.927	Seriola_lalandi_dorsalis
ENSFHEG00000020623	cstf3	100	90.251	ENSSARG00000000391	CSTF3	100	90.251	Sorex_araneus
ENSFHEG00000020623	cstf3	96	90.304	ENSSPUG00000010546	CSTF3	100	90.304	Sphenodon_punctatus
ENSFHEG00000020623	cstf3	100	96.788	ENSSPAG00000004958	cstf3	100	96.788	Stegastes_partitus
ENSFHEG00000020623	cstf3	99	90.182	ENSSSCG00000040954	CSTF3	99	90.182	Sus_scrofa
ENSFHEG00000020623	cstf3	99	90.678	ENSTGUG00000005010	CSTF3	100	90.678	Taeniopygia_guttata
ENSFHEG00000020623	cstf3	100	94.972	ENSTRUG00000004959	cstf3	100	94.972	Takifugu_rubripes
ENSFHEG00000020623	cstf3	99	95.904	ENSTNIG00000013811	cstf3	99	95.904	Tetraodon_nigroviridis
ENSFHEG00000020623	cstf3	89	88.006	ENSTBEG00000001544	CSTF3	90	88.006	Tupaia_belangeri
ENSFHEG00000020623	cstf3	100	87.604	ENSTTRG00000016366	CSTF3	100	87.604	Tursiops_truncatus
ENSFHEG00000020623	cstf3	99	90.678	ENSUMAG00000018971	CSTF3	100	90.080	Ursus_maritimus
ENSFHEG00000020623	cstf3	100	90.251	ENSVPAG00000007800	CSTF3	100	90.251	Vicugna_pacos
ENSFHEG00000020623	cstf3	99	90.960	ENSVVUG00000014938	CSTF3	100	90.400	Vulpes_vulpes
ENSFHEG00000020623	cstf3	66	42.116	ENSXETG00000017946	-	99	42.116	Xenopus_tropicalis
ENSFHEG00000020623	cstf3	88	75.000	ENSXETG00000021399	cstf3	100	76.052	Xenopus_tropicalis
ENSFHEG00000020623	cstf3	87	98.074	ENSXCOG00000011741	cstf3	100	98.074	Xiphophorus_couchianus
ENSFHEG00000020623	cstf3	100	98.743	ENSXMAG00000009545	cstf3	100	98.743	Xiphophorus_maculatus