EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000020647 (Gene tree)
Gene ID: 105935335
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 17474 bases
Position: chrKN811449.1:147418-164891
Accession: 105935335
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000033448	RRM_1	PF00076.22	2.4e-16	1	2
ENSFHEP00000033448	RRM_1	PF00076.22	2.4e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000027764	-	1458	XM_012875689	ENSFHEP00000033448	485 (aa)	XP_012731143	-

Gene Model

Click here to download ENSFHEG00000020647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000020647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000020647	rnpc3	98	50.489	ENSG00000185946	RNPC3	96	57.143	Homo_sapiens
ENSFHEG00000020647	rnpc3	100	75.198	ENSAPOG00000017371	rnpc3	100	75.198	Acanthochromis_polyacanthus
ENSFHEG00000020647	rnpc3	98	49.903	ENSAMEG00000001694	RNPC3	95	50.797	Ailuropoda_melanoleuca
ENSFHEG00000020647	rnpc3	99	70.866	ENSACIG00000021043	rnpc3	99	70.866	Amphilophus_citrinellus
ENSFHEG00000020647	rnpc3	100	75.098	ENSAOCG00000014052	rnpc3	98	75.098	Amphiprion_ocellaris
ENSFHEG00000020647	rnpc3	100	74.902	ENSAPEG00000008739	rnpc3	98	74.902	Amphiprion_percula
ENSFHEG00000020647	rnpc3	100	72.481	ENSATEG00000021263	rnpc3	100	72.674	Anabas_testudineus
ENSFHEG00000020647	rnpc3	88	51.678	ENSAPLG00000015605	RNPC3	99	51.902	Anas_platyrhynchos
ENSFHEG00000020647	rnpc3	97	51.125	ENSACAG00000002029	RNPC3	98	51.509	Anolis_carolinensis
ENSFHEG00000020647	rnpc3	98	50.391	ENSANAG00000019950	RNPC3	95	51.606	Aotus_nancymaae
ENSFHEG00000020647	rnpc3	99	75.152	ENSACLG00000014702	rnpc3	99	75.152	Astatotilapia_calliptera
ENSFHEG00000020647	rnpc3	99	61.067	ENSAMXG00000033372	rnpc3	99	61.341	Astyanax_mexicanus
ENSFHEG00000020647	rnpc3	98	49.902	ENSBTAG00000019091	RNPC3	95	51.308	Bos_taurus
ENSFHEG00000020647	rnpc3	98	51.116	ENSCJAG00000035686	RNPC3	95	51.116	Callithrix_jacchus
ENSFHEG00000020647	rnpc3	98	50.294	ENSCAFG00000019972	RNPC3	95	51.509	Canis_familiaris
ENSFHEG00000020647	rnpc3	98	50.294	ENSCAFG00020011300	RNPC3	95	51.107	Canis_lupus_dingo
ENSFHEG00000020647	rnpc3	98	50.898	ENSCHIG00000020361	RNPC3	95	50.803	Capra_hircus
ENSFHEG00000020647	rnpc3	98	50.391	ENSTSYG00000030256	RNPC3	95	51.606	Carlito_syrichta
ENSFHEG00000020647	rnpc3	85	43.018	ENSCAPG00000013600	RNPC3	97	41.839	Cavia_aperea
ENSFHEG00000020647	rnpc3	98	49.807	ENSCPOG00000031638	RNPC3	95	50.497	Cavia_porcellus
ENSFHEG00000020647	rnpc3	98	50.000	ENSCCAG00000024301	RNPC3	95	51.205	Cebus_capucinus
ENSFHEG00000020647	rnpc3	98	50.391	ENSCATG00000002086	RNPC3	95	50.794	Cercocebus_atys
ENSFHEG00000020647	rnpc3	98	39.761	ENSCATG00000035930	-	52	44.304	Cercocebus_atys
ENSFHEG00000020647	rnpc3	98	48.743	ENSCLAG00000005169	RNPC3	95	49.602	Chinchilla_lanigera
ENSFHEG00000020647	rnpc3	98	50.391	ENSCSAG00000001519	RNPC3	95	50.794	Chlorocebus_sabaeus
ENSFHEG00000020647	rnpc3	96	51.738	ENSCPBG00000028311	RNPC3	95	52.352	Chrysemys_picta_bellii
ENSFHEG00000020647	rnpc3	94	36.325	ENSCSAVG00000002800	-	71	58.559	Ciona_savignyi
ENSFHEG00000020647	rnpc3	98	49.035	ENSCANG00000031444	RNPC3	95	50.397	Colobus_angolensis_palliatus
ENSFHEG00000020647	rnpc3	97	50.198	ENSCGRG00001019276	Rnpc3	95	51.423	Cricetulus_griseus_chok1gshd
ENSFHEG00000020647	rnpc3	88	47.854	ENSCGRG00000000053	Rnpc3	99	49.115	Cricetulus_griseus_crigri
ENSFHEG00000020647	rnpc3	99	70.968	ENSCSEG00000013475	rnpc3	99	70.968	Cynoglossus_semilaevis
ENSFHEG00000020647	rnpc3	100	81.055	ENSCVAG00000002645	rnpc3	100	81.250	Cyprinodon_variegatus
ENSFHEG00000020647	rnpc3	97	62.298	ENSDARG00000011247	rnpc3	97	62.298	Danio_rerio
ENSFHEG00000020647	rnpc3	96	51.731	ENSDNOG00000044555	-	95	50.713	Dasypus_novemcinctus
ENSFHEG00000020647	rnpc3	96	51.527	ENSDNOG00000047498	-	95	51.324	Dasypus_novemcinctus
ENSFHEG00000020647	rnpc3	98	48.824	ENSDORG00000027343	Rnpc3	96	50.403	Dipodomys_ordii
ENSFHEG00000020647	rnpc3	100	47.308	ENSEBUG00000002068	rnpc3	99	47.592	Eptatretus_burgeri
ENSFHEG00000020647	rnpc3	98	50.194	ENSEASG00005015957	RNPC3	95	51.619	Equus_asinus_asinus
ENSFHEG00000020647	rnpc3	98	50.881	ENSECAG00000021148	RNPC3	95	52.113	Equus_caballus
ENSFHEG00000020647	rnpc3	99	63.340	ENSELUG00000002264	rnpc3	99	61.804	Esox_lucius
ENSFHEG00000020647	rnpc3	96	50.295	ENSFCAG00000024312	RNPC3	94	51.215	Felis_catus
ENSFHEG00000020647	rnpc3	88	51.454	ENSFALG00000002580	RNPC3	99	51.902	Ficedula_albicollis
ENSFHEG00000020647	rnpc3	98	49.709	ENSFDAG00000019948	RNPC3	96	51.098	Fukomys_damarensis
ENSFHEG00000020647	rnpc3	100	64.444	ENSGMOG00000019213	rnpc3	99	63.984	Gadus_morhua
ENSFHEG00000020647	rnpc3	96	52.263	ENSGALG00000005162	RNPC3	88	49.697	Gallus_gallus
ENSFHEG00000020647	rnpc3	100	76.621	ENSGAFG00000017236	rnpc3	100	77.362	Gambusia_affinis
ENSFHEG00000020647	rnpc3	100	71.089	ENSGACG00000002048	rnpc3	98	70.751	Gasterosteus_aculeatus
ENSFHEG00000020647	rnpc3	96	52.352	ENSGAGG00000008438	RNPC3	94	52.556	Gopherus_agassizii
ENSFHEG00000020647	rnpc3	97	45.380	ENSGGOG00000026201	-	95	44.215	Gorilla_gorilla
ENSFHEG00000020647	rnpc3	82	83.333	ENSHBUG00000015966	rnpc3	85	83.333	Haplochromis_burtoni
ENSFHEG00000020647	rnpc3	98	49.228	ENSHGLG00000001708	RNPC3	95	50.000	Heterocephalus_glaber_female
ENSFHEG00000020647	rnpc3	98	49.228	ENSHGLG00100003005	RNPC3	95	50.000	Heterocephalus_glaber_male
ENSFHEG00000020647	rnpc3	99	70.392	ENSHCOG00000017135	rnpc3	100	70.312	Hippocampus_comes
ENSFHEG00000020647	rnpc3	99	60.321	ENSIPUG00000002916	rnpc3	99	60.321	Ictalurus_punctatus
ENSFHEG00000020647	rnpc3	98	50.000	ENSSTOG00000025020	RNPC3	95	51.098	Ictidomys_tridecemlineatus
ENSFHEG00000020647	rnpc3	96	49.602	ENSJJAG00000010203	Rnpc3	95	51.025	Jaculus_jaculus
ENSFHEG00000020647	rnpc3	99	77.016	ENSKMAG00000017358	rnpc3	99	76.459	Kryptolebias_marmoratus
ENSFHEG00000020647	rnpc3	100	72.638	ENSLBEG00000024901	rnpc3	98	72.244	Labrus_bergylta
ENSFHEG00000020647	rnpc3	97	53.465	ENSLACG00000005720	RNPC3	90	50.781	Latimeria_chalumnae
ENSFHEG00000020647	rnpc3	98	55.263	ENSLOCG00000007986	rnpc3	97	57.490	Lepisosteus_oculatus
ENSFHEG00000020647	rnpc3	98	49.803	ENSLAFG00000032342	RNPC3	96	50.493	Loxodonta_africana
ENSFHEG00000020647	rnpc3	98	50.391	ENSMFAG00000002004	RNPC3	95	50.794	Macaca_fascicularis
ENSFHEG00000020647	rnpc3	98	39.425	ENSMFAG00000002917	-	54	46.186	Macaca_fascicularis
ENSFHEG00000020647	rnpc3	98	50.195	ENSMMUG00000018039	RNPC3	95	50.595	Macaca_mulatta
ENSFHEG00000020647	rnpc3	81	47.805	ENSMMUG00000002098	-	85	47.805	Macaca_mulatta
ENSFHEG00000020647	rnpc3	98	48.024	ENSMNEG00000033950	RNPC3	95	49.696	Macaca_nemestrina
ENSFHEG00000020647	rnpc3	98	50.391	ENSMLEG00000033628	RNPC3	95	50.794	Mandrillus_leucophaeus
ENSFHEG00000020647	rnpc3	98	40.825	ENSMLEG00000034644	-	96	39.558	Mandrillus_leucophaeus
ENSFHEG00000020647	rnpc3	100	66.339	ENSMAMG00000007496	rnpc3	100	66.339	Mastacembelus_armatus
ENSFHEG00000020647	rnpc3	99	73.099	ENSMZEG00005020233	rnpc3	99	73.099	Maylandia_zebra
ENSFHEG00000020647	rnpc3	88	50.989	ENSMGAG00000006381	RNPC3	99	50.993	Meleagris_gallopavo
ENSFHEG00000020647	rnpc3	98	50.295	ENSMAUG00000001358	Rnpc3	96	51.509	Mesocricetus_auratus
ENSFHEG00000020647	rnpc3	98	49.805	ENSMICG00000029591	RNPC3	95	51.004	Microcebus_murinus
ENSFHEG00000020647	rnpc3	98	49.903	ENSMOCG00000013423	Rnpc3	95	50.403	Microtus_ochrogaster
ENSFHEG00000020647	rnpc3	100	69.231	ENSMMOG00000005309	rnpc3	100	65.795	Mola_mola
ENSFHEG00000020647	rnpc3	98	53.024	ENSMODG00000002946	RNPC3	96	52.342	Monodelphis_domestica
ENSFHEG00000020647	rnpc3	99	68.651	ENSMALG00000015471	rnpc3	99	63.347	Monopterus_albus
ENSFHEG00000020647	rnpc3	98	50.000	MGP_CAROLIEiJ_G0025555	Rnpc3	97	50.707	Mus_caroli
ENSFHEG00000020647	rnpc3	98	50.000	ENSMUSG00000027981	Rnpc3	99	48.817	Mus_musculus
ENSFHEG00000020647	rnpc3	96	50.000	MGP_PahariEiJ_G0027001	Rnpc3	96	50.713	Mus_pahari
ENSFHEG00000020647	rnpc3	98	48.062	MGP_SPRETEiJ_G0026505	Rnpc3	97	50.503	Mus_spretus
ENSFHEG00000020647	rnpc3	98	50.586	ENSMPUG00000007349	RNPC3	95	51.904	Mustela_putorius_furo
ENSFHEG00000020647	rnpc3	97	50.000	ENSMLUG00000028743	RNPC3	95	50.806	Myotis_lucifugus
ENSFHEG00000020647	rnpc3	98	49.706	ENSNGAG00000010939	Rnpc3	96	50.905	Nannospalax_galili
ENSFHEG00000020647	rnpc3	99	75.556	ENSNBRG00000012196	rnpc3	96	75.556	Neolamprologus_brichardi
ENSFHEG00000020647	rnpc3	98	50.489	ENSNLEG00000012013	RNPC3	95	50.895	Nomascus_leucogenys
ENSFHEG00000020647	rnpc3	98	49.608	ENSODEG00000007612	RNPC3	95	50.503	Octodon_degus
ENSFHEG00000020647	rnpc3	99	74.753	ENSONIG00000004770	rnpc3	100	76.386	Oreochromis_niloticus
ENSFHEG00000020647	rnpc3	91	52.043	ENSOANG00000008220	RNPC3	99	51.828	Ornithorhynchus_anatinus
ENSFHEG00000020647	rnpc3	98	51.394	ENSOCUG00000004016	RNPC3	96	51.703	Oryctolagus_cuniculus
ENSFHEG00000020647	rnpc3	100	73.000	ENSORLG00000005694	rnpc3	100	73.000	Oryzias_latipes
ENSFHEG00000020647	rnpc3	100	73.800	ENSORLG00020005513	rnpc3	100	73.800	Oryzias_latipes_hni
ENSFHEG00000020647	rnpc3	100	73.000	ENSORLG00015002179	rnpc3	100	73.000	Oryzias_latipes_hsok
ENSFHEG00000020647	rnpc3	51	72.973	ENSOMEG00000017737	rnpc3	100	75.000	Oryzias_melastigma
ENSFHEG00000020647	rnpc3	98	50.294	ENSOGAG00000026182	RNPC3	95	51.509	Otolemur_garnettii
ENSFHEG00000020647	rnpc3	98	50.898	ENSOARG00000018719	RNPC3	95	50.803	Ovis_aries
ENSFHEG00000020647	rnpc3	98	50.292	ENSPPAG00000037459	RNPC3	95	50.693	Pan_paniscus
ENSFHEG00000020647	rnpc3	97	44.742	ENSPPAG00000030278	-	95	44.842	Pan_paniscus
ENSFHEG00000020647	rnpc3	96	50.295	ENSPPRG00000020246	RNPC3	94	51.215	Panthera_pardus
ENSFHEG00000020647	rnpc3	96	50.295	ENSPTIG00000009887	RNPC3	96	51.215	Panthera_tigris_altaica
ENSFHEG00000020647	rnpc3	98	50.195	ENSPTRG00000033902	RNPC3	95	50.595	Pan_troglodytes
ENSFHEG00000020647	rnpc3	96	44.561	ENSPTRG00000044227	-	95	43.515	Pan_troglodytes
ENSFHEG00000020647	rnpc3	98	41.352	ENSPANG00000029957	-	51	43.830	Papio_anubis
ENSFHEG00000020647	rnpc3	98	50.489	ENSPANG00000012137	RNPC3	95	50.895	Papio_anubis
ENSFHEG00000020647	rnpc3	98	62.048	ENSPKIG00000008828	rnpc3	97	61.554	Paramormyrops_kingsleyae
ENSFHEG00000020647	rnpc3	63	48.624	ENSPSIG00000007396	RNPC3	99	48.930	Pelodiscus_sinensis
ENSFHEG00000020647	rnpc3	100	60.511	ENSPMGG00000011742	rnpc3	99	61.220	Periophthalmus_magnuspinnatus
ENSFHEG00000020647	rnpc3	89	47.752	ENSPEMG00000020112	Rnpc3	99	49.336	Peromyscus_maniculatus_bairdii
ENSFHEG00000020647	rnpc3	96	40.713	ENSPMAG00000003778	rnpc3	96	44.208	Petromyzon_marinus
ENSFHEG00000020647	rnpc3	98	53.333	ENSPCIG00000004415	-	96	52.653	Phascolarctos_cinereus
ENSFHEG00000020647	rnpc3	99	79.125	ENSPFOG00000009895	rnpc3	99	79.324	Poecilia_formosa
ENSFHEG00000020647	rnpc3	99	79.125	ENSPLAG00000012023	rnpc3	99	79.324	Poecilia_latipinna
ENSFHEG00000020647	rnpc3	99	79.324	ENSPMEG00000003663	rnpc3	99	79.523	Poecilia_mexicana
ENSFHEG00000020647	rnpc3	100	78.063	ENSPREG00000010206	rnpc3	100	78.261	Poecilia_reticulata
ENSFHEG00000020647	rnpc3	81	45.476	ENSPPYG00000001102	RNPC3	94	45.863	Pongo_abelii
ENSFHEG00000020647	rnpc3	99	75.152	ENSPNYG00000020603	rnpc3	99	75.152	Pundamilia_nyererei
ENSFHEG00000020647	rnpc3	98	50.392	ENSRNOG00000017310	Rnpc3	96	51.815	Rattus_norvegicus
ENSFHEG00000020647	rnpc3	98	46.589	ENSRBIG00000043897	RNPC3	95	46.931	Rhinopithecus_bieti
ENSFHEG00000020647	rnpc3	98	50.391	ENSRROG00000032334	RNPC3	95	50.794	Rhinopithecus_roxellana
ENSFHEG00000020647	rnpc3	98	49.902	ENSSBOG00000024473	RNPC3	96	51.107	Saimiri_boliviensis_boliviensis
ENSFHEG00000020647	rnpc3	98	52.000	ENSSHAG00000011859	RNPC3	96	51.313	Sarcophilus_harrisii
ENSFHEG00000020647	rnpc3	97	65.638	ENSSFOG00015013055	rnpc3	99	65.638	Scleropages_formosus
ENSFHEG00000020647	rnpc3	100	66.408	ENSSMAG00000020346	rnpc3	100	66.019	Scophthalmus_maximus
ENSFHEG00000020647	rnpc3	100	73.489	ENSSDUG00000006600	rnpc3	100	73.489	Seriola_dumerili
ENSFHEG00000020647	rnpc3	100	73.489	ENSSLDG00000007979	rnpc3	100	73.684	Seriola_lalandi_dorsalis
ENSFHEG00000020647	rnpc3	97	46.667	ENSSPUG00000008539	-	92	51.738	Sphenodon_punctatus
ENSFHEG00000020647	rnpc3	96	50.722	ENSSPUG00000003872	-	92	46.733	Sphenodon_punctatus
ENSFHEG00000020647	rnpc3	100	75.904	ENSSPAG00000005633	rnpc3	100	75.551	Stegastes_partitus
ENSFHEG00000020647	rnpc3	98	52.632	ENSSSCG00000037254	RNPC3	95	52.429	Sus_scrofa
ENSFHEG00000020647	rnpc3	88	52.466	ENSTGUG00000004795	-	99	52.466	Taeniopygia_guttata
ENSFHEG00000020647	rnpc3	99	67.578	ENSTNIG00000018963	rnpc3	52	64.015	Tetraodon_nigroviridis
ENSFHEG00000020647	rnpc3	98	50.000	ENSUMAG00000007775	RNPC3	97	50.898	Ursus_maritimus
ENSFHEG00000020647	rnpc3	98	50.294	ENSVVUG00000000331	RNPC3	95	51.107	Vulpes_vulpes
ENSFHEG00000020647	rnpc3	95	41.962	ENSXETG00000025027	rnpc3	95	38.600	Xenopus_tropicalis
ENSFHEG00000020647	rnpc3	100	77.886	ENSXCOG00000005013	rnpc3	100	77.800	Xiphophorus_couchianus
ENSFHEG00000020647	rnpc3	100	77.362	ENSXMAG00000006495	rnpc3	100	77.953	Xiphophorus_maculatus