EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000020794 (Gene tree)
Gene ID: 105931923
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 26188 bases
Position: chrKN811379.1:192924-219111
Accession: 105931923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000033583	Nucleoplasmin	PF03066.15	4.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000034568	-	3196	XM_012870831	ENSFHEP00000033583	299 (aa)	XP_012726285	UPI000644E63F

Gene Model

Click here to download ENSFHEG00000020794's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000020794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000020794	npm1b	96	41.694	ENSFHEG00000012496	npm1a	97	42.997

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000020794	npm1b	100	78.738	ENSAPOG00000004268	npm1b	100	78.738	Acanthochromis_polyacanthus
ENSFHEG00000020794	npm1b	100	76.080	ENSAOCG00000012549	npm1b	100	76.080	Amphiprion_ocellaris
ENSFHEG00000020794	npm1b	100	75.083	ENSAPEG00000000868	npm1b	100	75.083	Amphiprion_percula
ENSFHEG00000020794	npm1b	100	78.073	ENSATEG00000006254	npm1b	100	78.073	Anabas_testudineus
ENSFHEG00000020794	npm1b	98	44.224	ENSACAG00000015626	-	100	45.425	Anolis_carolinensis
ENSFHEG00000020794	npm1b	98	60.000	ENSAMXG00000042148	npm1b	99	61.111	Astyanax_mexicanus
ENSFHEG00000020794	npm1b	77	31.250	ENSCAFG00000023359	-	62	34.969	Canis_familiaris
ENSFHEG00000020794	npm1b	98	44.984	ENSCPBG00000021221	-	60	45.955	Chrysemys_picta_bellii
ENSFHEG00000020794	npm1b	100	71.761	ENSCSEG00000004530	npm1b	100	71.761	Cynoglossus_semilaevis
ENSFHEG00000020794	npm1b	100	89.632	ENSCVAG00000013016	npm1b	100	89.632	Cyprinodon_variegatus
ENSFHEG00000020794	npm1b	99	63.816	ENSDARG00000037675	npm1b	99	64.145	Danio_rerio
ENSFHEG00000020794	npm1b	99	61.438	ENSELUG00000022123	npm1b	99	61.438	Esox_lucius
ENSFHEG00000020794	npm1b	94	42.361	ENSFALG00000003320	-	94	43.448	Ficedula_albicollis
ENSFHEG00000020794	npm1b	98	61.149	ENSGMOG00000002689	npm1b	100	62.162	Gadus_morhua
ENSFHEG00000020794	npm1b	98	42.208	ENSGALG00000002197	-	73	43.182	Gallus_gallus
ENSFHEG00000020794	npm1b	100	88.294	ENSGAFG00000017709	npm1b	100	87.960	Gambusia_affinis
ENSFHEG00000020794	npm1b	98	73.986	ENSGACG00000016706	npm1b	100	73.986	Gasterosteus_aculeatus
ENSFHEG00000020794	npm1b	98	42.903	ENSGAGG00000020250	-	100	43.871	Gopherus_agassizii
ENSFHEG00000020794	npm1b	100	77.076	ENSHBUG00000019903	npm1b	95	79.734	Haplochromis_burtoni
ENSFHEG00000020794	npm1b	100	67.442	ENSHCOG00000003895	npm1b	100	67.442	Hippocampus_comes
ENSFHEG00000020794	npm1b	99	59.868	ENSIPUG00000020165	npm1b	99	60.197	Ictalurus_punctatus
ENSFHEG00000020794	npm1b	99	81.481	ENSKMAG00000008260	npm1b	99	83.502	Kryptolebias_marmoratus
ENSFHEG00000020794	npm1b	94	40.323	ENSLACG00000001779	-	100	41.156	Latimeria_chalumnae
ENSFHEG00000020794	npm1b	94	46.644	ENSLOCG00000001942	npm1b	100	47.315	Lepisosteus_oculatus
ENSFHEG00000020794	npm1b	72	73.973	ENSMAMG00000015335	npm1b	100	75.799	Mastacembelus_armatus
ENSFHEG00000020794	npm1b	93	42.160	ENSMGAG00000001591	-	100	43.206	Meleagris_gallopavo
ENSFHEG00000020794	npm1b	81	74.694	ENSMALG00000015383	npm1b	100	74.286	Monopterus_albus
ENSFHEG00000020794	npm1b	99	71.761	ENSONIG00000001397	npm1b	98	71.761	Oreochromis_niloticus
ENSFHEG00000020794	npm1b	100	66.890	ENSOMEG00000003414	npm1b	100	64.883	Oryzias_melastigma
ENSFHEG00000020794	npm1b	99	57.006	ENSPKIG00000020050	npm1b	99	57.742	Paramormyrops_kingsleyae
ENSFHEG00000020794	npm1b	96	44.147	ENSPSIG00000011204	-	92	45.085	Pelodiscus_sinensis
ENSFHEG00000020794	npm1b	88	36.059	ENSPMAG00000004930	npm1b	99	34.615	Petromyzon_marinus
ENSFHEG00000020794	npm1b	100	88.629	ENSPFOG00000018357	npm1b	100	88.629	Poecilia_formosa
ENSFHEG00000020794	npm1b	98	57.475	ENSPNAG00000005498	npm1b	99	58.140	Pygocentrus_nattereri
ENSFHEG00000020794	npm1b	99	56.811	ENSSFOG00015005064	npm1b	100	57.143	Scleropages_formosus
ENSFHEG00000020794	npm1b	100	71.667	ENSSMAG00000008088	npm1b	100	71.667	Scophthalmus_maximus
ENSFHEG00000020794	npm1b	100	79.070	ENSSDUG00000007726	npm1b	100	77.741	Seriola_dumerili
ENSFHEG00000020794	npm1b	100	78.738	ENSSLDG00000021396	npm1b	100	78.073	Seriola_lalandi_dorsalis
ENSFHEG00000020794	npm1b	50	44.872	ENSSPUG00000015604	-	76	46.154	Sphenodon_punctatus
ENSFHEG00000020794	npm1b	100	78.738	ENSSPAG00000011152	npm1b	100	78.738	Stegastes_partitus
ENSFHEG00000020794	npm1b	93	42.069	ENSTGUG00000014970	-	100	42.759	Taeniopygia_guttata
ENSFHEG00000020794	npm1b	100	70.627	ENSTRUG00000008105	npm1b	95	68.977	Takifugu_rubripes
ENSFHEG00000020794	npm1b	99	67.327	ENSTNIG00000013057	npm1b	100	67.327	Tetraodon_nigroviridis
ENSFHEG00000020794	npm1b	99	42.540	ENSXETG00000008403	npm1	100	41.534	Xenopus_tropicalis
ENSFHEG00000020794	npm1b	100	89.967	ENSXMAG00000001986	npm1b	100	89.967	Xiphophorus_maculatus