EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000020971 (Gene tree)
Gene ID: 105928259
Gene Symbol: srek1
Alias: zgc:100974
Full Name: splicing regulatory glutamic acid and lysine rich protein 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 8953 bases
Position: chrKN805573.1:58136-67088
Accession: 105928259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000019075	RRM_1	PF00076.22	3.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000034626	-	4223	XM_012865434	ENSFHEP00000019075	346 (aa)	XP_012720888	-

Gene Model

Click here to download ENSFHEG00000020971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000020971's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000020971	srek1	99	80.229	ENSAPOG00000023618	srek1	89	75.000	Acanthochromis_polyacanthus
ENSFHEG00000020971	srek1	99	81.089	ENSAOCG00000024379	srek1	89	75.862	Amphiprion_ocellaris
ENSFHEG00000020971	srek1	99	76.149	ENSATEG00000009450	srek1	89	76.149	Anabas_testudineus
ENSFHEG00000020971	srek1	97	51.351	ENSAMXG00000043877	srek1	75	51.733	Astyanax_mexicanus
ENSFHEG00000020971	srek1	63	68.807	ENSHCOG00000017240	SREK1	61	62.449	Hippocampus_comes
ENSFHEG00000020971	srek1	97	58.182	ENSIPUG00000016851	srek1	75	58.656	Ictalurus_punctatus
ENSFHEG00000020971	srek1	99	71.839	ENSMALG00000017086	srek1	74	72.779	Monopterus_albus
ENSFHEG00000020971	srek1	98	67.717	ENSONIG00000011080	srek1	87	83.495	Oreochromis_niloticus
ENSFHEG00000020971	srek1	99	76.657	ENSOMEG00000015817	srek1	80	76.657	Oryzias_melastigma
ENSFHEG00000020971	srek1	97	51.613	ENSPKIG00000025563	srek1	76	55.164	Paramormyrops_kingsleyae
ENSFHEG00000020971	srek1	98	76.640	ENSPMEG00000006831	srek1	94	74.278	Poecilia_mexicana
ENSFHEG00000020971	srek1	90	81.132	ENSPNYG00000007160	srek1	99	81.132	Pundamilia_nyererei
ENSFHEG00000020971	srek1	98	57.975	ENSPNAG00000004328	srek1	75	52.455	Pygocentrus_nattereri
ENSFHEG00000020971	srek1	97	52.311	ENSSFOG00015004995	srek1	78	53.616	Scleropages_formosus
ENSFHEG00000020971	srek1	99	73.851	ENSSMAG00000011808	srek1	74	70.085	Scophthalmus_maximus
ENSFHEG00000020971	srek1	84	66.438	ENSTNIG00000013463	srek1	65	63.014	Tetraodon_nigroviridis