EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000021084 (Gene tree)
Gene ID: 105936473
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 19146 bases
Position: chrKN811483.1:357322-376467
Accession: 105936473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000019061	RRM_4	PF10598.9	3.3e-48	1	1
ENSFHEP00000019061	U5_2-snRNA_bdg	PF10597.9	7.7e-74	1	1
ENSFHEP00000019061	PRO8NT	PF08082.11	7.5e-88	1	1
ENSFHEP00000019061	U6-snRNA_bdg	PF10596.9	1.7e-88	1	1
ENSFHEP00000019061	PROCN	PF08083.11	4.3e-235	1	1
ENSFHEP00000019061	PRP8_domainIV	PF12134.8	4.6e-130	1	1
ENSFHEP00000019061	PROCT	PF08084.11	2.9e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000030328	-	7029	XM_012877355	ENSFHEP00000019061	2342 (aa)	XP_012732809	-

Gene Model

Click here to download ENSFHEG00000021084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000021084's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000021084	prpf8	100	97.438	ENSG00000174231	PRPF8	100	97.438	Homo_sapiens
ENSFHEG00000021084	prpf8	100	98.804	ENSAPOG00000010079	prpf8	100	98.804	Acanthochromis_polyacanthus
ENSFHEG00000021084	prpf8	100	97.438	ENSAMEG00000007940	PRPF8	100	97.438	Ailuropoda_melanoleuca
ENSFHEG00000021084	prpf8	100	96.985	ENSACIG00000018280	prpf8	100	96.985	Amphilophus_citrinellus
ENSFHEG00000021084	prpf8	100	98.804	ENSAOCG00000010725	prpf8	100	98.804	Amphiprion_ocellaris
ENSFHEG00000021084	prpf8	100	98.804	ENSAPEG00000014397	prpf8	100	98.804	Amphiprion_percula
ENSFHEG00000021084	prpf8	100	98.207	ENSATEG00000010062	prpf8	100	98.207	Anabas_testudineus
ENSFHEG00000021084	prpf8	96	97.909	ENSAPLG00000010357	PRPF8	100	97.909	Anas_platyrhynchos
ENSFHEG00000021084	prpf8	83	95.936	ENSACAG00000014784	PRPF8	99	95.936	Anolis_carolinensis
ENSFHEG00000021084	prpf8	100	97.438	ENSANAG00000032629	PRPF8	100	97.438	Aotus_nancymaae
ENSFHEG00000021084	prpf8	100	98.383	ENSACLG00000020858	prpf8	100	98.383	Astatotilapia_calliptera
ENSFHEG00000021084	prpf8	100	98.335	ENSAMXG00000020291	prpf8	100	98.335	Astyanax_mexicanus
ENSFHEG00000021084	prpf8	100	97.438	ENSBTAG00000011488	PRPF8	100	97.438	Bos_taurus
ENSFHEG00000021084	prpf8	99	86.446	WBGene00004187	prp-8	99	86.894	Caenorhabditis_elegans
ENSFHEG00000021084	prpf8	100	97.438	ENSCJAG00000001911	PRPF8	100	97.438	Callithrix_jacchus
ENSFHEG00000021084	prpf8	100	97.438	ENSCAFG00000019221	PRPF8	100	97.438	Canis_familiaris
ENSFHEG00000021084	prpf8	96	97.903	ENSCAFG00020009943	PRPF8	100	97.903	Canis_lupus_dingo
ENSFHEG00000021084	prpf8	100	97.438	ENSCHIG00000017499	PRPF8	100	97.438	Capra_hircus
ENSFHEG00000021084	prpf8	100	97.438	ENSTSYG00000014120	PRPF8	100	97.438	Carlito_syrichta
ENSFHEG00000021084	prpf8	96	95.679	ENSCAPG00000009459	PRPF8	99	95.679	Cavia_aperea
ENSFHEG00000021084	prpf8	100	97.438	ENSCPOG00000010379	PRPF8	100	97.438	Cavia_porcellus
ENSFHEG00000021084	prpf8	100	97.438	ENSCCAG00000031983	-	100	97.438	Cebus_capucinus
ENSFHEG00000021084	prpf8	100	97.438	ENSCATG00000038595	PRPF8	100	97.438	Cercocebus_atys
ENSFHEG00000021084	prpf8	100	97.438	ENSCLAG00000004388	PRPF8	100	97.438	Chinchilla_lanigera
ENSFHEG00000021084	prpf8	100	97.438	ENSCSAG00000013929	PRPF8	100	97.438	Chlorocebus_sabaeus
ENSFHEG00000021084	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSFHEG00000021084	prpf8	100	97.438	ENSCPBG00000020409	PRPF8	100	97.438	Chrysemys_picta_bellii
ENSFHEG00000021084	prpf8	98	93.230	ENSCSAVG00000007825	-	100	91.452	Ciona_savignyi
ENSFHEG00000021084	prpf8	100	97.438	ENSCANG00000043088	PRPF8	100	97.438	Colobus_angolensis_palliatus
ENSFHEG00000021084	prpf8	73	99.213	ENSCGRG00000005129	Prpf8	100	99.213	Cricetulus_griseus_crigri
ENSFHEG00000021084	prpf8	100	98.634	ENSCSEG00000007905	prpf8	100	98.634	Cynoglossus_semilaevis
ENSFHEG00000021084	prpf8	100	98.463	ENSDARG00000026180	prpf8	100	98.463	Danio_rerio
ENSFHEG00000021084	prpf8	93	97.659	ENSDNOG00000018471	PRPF8	99	97.659	Dasypus_novemcinctus
ENSFHEG00000021084	prpf8	84	96.186	ENSDORG00000006185	Prpf8	96	96.186	Dipodomys_ordii
ENSFHEG00000021084	prpf8	99	91.193	FBgn0033688	Prp8	97	91.793	Drosophila_melanogaster
ENSFHEG00000021084	prpf8	100	92.143	ENSETEG00000017592	PRPF8	100	92.143	Echinops_telfairi
ENSFHEG00000021084	prpf8	99	93.305	ENSEBUG00000006548	prpf8	99	93.305	Eptatretus_burgeri
ENSFHEG00000021084	prpf8	100	97.438	ENSEASG00005009514	PRPF8	100	97.438	Equus_asinus_asinus
ENSFHEG00000021084	prpf8	97	97.934	ENSECAG00000021318	PRPF8	100	97.934	Equus_caballus
ENSFHEG00000021084	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSFHEG00000021084	prpf8	98	97.382	ENSELUG00000007120	prpf8	99	97.382	Esox_lucius
ENSFHEG00000021084	prpf8	100	97.438	ENSFCAG00000006297	PRPF8	100	97.438	Felis_catus
ENSFHEG00000021084	prpf8	100	97.566	ENSFALG00000006628	PRPF8	100	97.566	Ficedula_albicollis
ENSFHEG00000021084	prpf8	100	97.438	ENSFDAG00000004711	PRPF8	100	97.438	Fukomys_damarensis
ENSFHEG00000021084	prpf8	100	96.410	ENSGMOG00000002028	prpf8	99	96.410	Gadus_morhua
ENSFHEG00000021084	prpf8	100	97.566	ENSGALG00000002943	PRPF8	100	97.566	Gallus_gallus
ENSFHEG00000021084	prpf8	99	99.186	ENSGAFG00000010337	prpf8	99	99.186	Gambusia_affinis
ENSFHEG00000021084	prpf8	100	98.762	ENSGACG00000008504	prpf8	100	98.506	Gasterosteus_aculeatus
ENSFHEG00000021084	prpf8	100	97.481	ENSGAGG00000008350	PRPF8	100	97.481	Gopherus_agassizii
ENSFHEG00000021084	prpf8	100	97.438	ENSGGOG00000005516	PRPF8	100	97.438	Gorilla_gorilla
ENSFHEG00000021084	prpf8	100	98.335	ENSHBUG00000016192	prpf8	100	98.335	Haplochromis_burtoni
ENSFHEG00000021084	prpf8	100	97.438	ENSHGLG00000012029	PRPF8	100	97.438	Heterocephalus_glaber_female
ENSFHEG00000021084	prpf8	100	97.438	ENSHGLG00100016494	PRPF8	100	97.438	Heterocephalus_glaber_male
ENSFHEG00000021084	prpf8	100	98.377	ENSHCOG00000016414	prpf8	100	98.377	Hippocampus_comes
ENSFHEG00000021084	prpf8	100	98.335	ENSIPUG00000023230	prpf8	100	98.335	Ictalurus_punctatus
ENSFHEG00000021084	prpf8	100	97.438	ENSSTOG00000005128	PRPF8	100	97.438	Ictidomys_tridecemlineatus
ENSFHEG00000021084	prpf8	100	95.303	ENSJJAG00000021159	Prpf8	100	95.303	Jaculus_jaculus
ENSFHEG00000021084	prpf8	100	98.634	ENSKMAG00000016118	prpf8	100	98.634	Kryptolebias_marmoratus
ENSFHEG00000021084	prpf8	100	98.676	ENSLBEG00000026903	prpf8	100	98.676	Labrus_bergylta
ENSFHEG00000021084	prpf8	95	95.320	ENSLACG00000010479	PRPF8	99	98.213	Latimeria_chalumnae
ENSFHEG00000021084	prpf8	99	97.994	ENSLOCG00000005409	prpf8	99	97.994	Lepisosteus_oculatus
ENSFHEG00000021084	prpf8	100	97.438	ENSLAFG00000015445	PRPF8	100	97.438	Loxodonta_africana
ENSFHEG00000021084	prpf8	100	97.438	ENSMFAG00000039995	PRPF8	100	97.438	Macaca_fascicularis
ENSFHEG00000021084	prpf8	100	97.438	ENSMMUG00000004820	PRPF8	100	97.438	Macaca_mulatta
ENSFHEG00000021084	prpf8	100	97.438	ENSMNEG00000035713	PRPF8	100	97.438	Macaca_nemestrina
ENSFHEG00000021084	prpf8	100	97.438	ENSMLEG00000037937	PRPF8	100	97.438	Mandrillus_leucophaeus
ENSFHEG00000021084	prpf8	100	98.975	ENSMAMG00000008919	prpf8	100	98.975	Mastacembelus_armatus
ENSFHEG00000021084	prpf8	100	98.383	ENSMZEG00005015073	prpf8	100	98.383	Maylandia_zebra
ENSFHEG00000021084	prpf8	100	97.566	ENSMGAG00000004769	PRPF8	100	97.566	Meleagris_gallopavo
ENSFHEG00000021084	prpf8	100	97.438	ENSMICG00000010320	PRPF8	100	97.438	Microcebus_murinus
ENSFHEG00000021084	prpf8	100	97.438	ENSMOCG00000016838	Prpf8	100	97.438	Microtus_ochrogaster
ENSFHEG00000021084	prpf8	100	98.335	ENSMMOG00000011887	prpf8	100	98.335	Mola_mola
ENSFHEG00000021084	prpf8	100	97.353	ENSMODG00000010480	PRPF8	100	97.353	Monodelphis_domestica
ENSFHEG00000021084	prpf8	97	98.536	ENSMALG00000003558	prpf8	100	98.536	Monopterus_albus
ENSFHEG00000021084	prpf8	100	97.395	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.395	Mus_caroli
ENSFHEG00000021084	prpf8	100	97.395	ENSMUSG00000020850	Prpf8	100	97.395	Mus_musculus
ENSFHEG00000021084	prpf8	100	97.353	MGP_PahariEiJ_G0017877	Prpf8	100	97.353	Mus_pahari
ENSFHEG00000021084	prpf8	100	97.395	MGP_SPRETEiJ_G0017583	Prpf8	100	97.395	Mus_spretus
ENSFHEG00000021084	prpf8	100	97.438	ENSMPUG00000013227	PRPF8	100	97.438	Mustela_putorius_furo
ENSFHEG00000021084	prpf8	100	97.313	ENSMLUG00000002666	PRPF8	100	97.313	Myotis_lucifugus
ENSFHEG00000021084	prpf8	100	95.687	ENSNGAG00000005305	Prpf8	100	95.687	Nannospalax_galili
ENSFHEG00000021084	prpf8	100	98.426	ENSNBRG00000013127	prpf8	100	98.426	Neolamprologus_brichardi
ENSFHEG00000021084	prpf8	97	96.694	ENSNLEG00000000897	PRPF8	98	96.694	Nomascus_leucogenys
ENSFHEG00000021084	prpf8	98	96.045	ENSMEUG00000015999	PRPF8	100	96.045	Notamacropus_eugenii
ENSFHEG00000021084	prpf8	100	95.944	ENSOPRG00000003102	PRPF8	100	95.524	Ochotona_princeps
ENSFHEG00000021084	prpf8	100	97.438	ENSODEG00000008468	PRPF8	100	97.438	Octodon_degus
ENSFHEG00000021084	prpf8	100	98.383	ENSONIG00000008153	prpf8	100	98.383	Oreochromis_niloticus
ENSFHEG00000021084	prpf8	82	98.972	ENSOANG00000004250	PRPF8	97	98.972	Ornithorhynchus_anatinus
ENSFHEG00000021084	prpf8	100	97.438	ENSOCUG00000000081	PRPF8	100	97.438	Oryctolagus_cuniculus
ENSFHEG00000021084	prpf8	100	98.301	ENSORLG00000008036	prpf8	100	98.301	Oryzias_latipes
ENSFHEG00000021084	prpf8	100	98.259	ENSORLG00020021070	prpf8	100	98.259	Oryzias_latipes_hni
ENSFHEG00000021084	prpf8	100	98.301	ENSORLG00015002340	prpf8	100	98.301	Oryzias_latipes_hsok
ENSFHEG00000021084	prpf8	100	96.644	ENSOMEG00000016866	prpf8	100	96.644	Oryzias_melastigma
ENSFHEG00000021084	prpf8	100	97.313	ENSOARG00000013312	PRPF8	100	97.313	Ovis_aries
ENSFHEG00000021084	prpf8	100	97.438	ENSPPAG00000042753	PRPF8	100	97.438	Pan_paniscus
ENSFHEG00000021084	prpf8	100	97.438	ENSPPRG00000008746	PRPF8	100	97.438	Panthera_pardus
ENSFHEG00000021084	prpf8	100	97.353	ENSPTIG00000019200	PRPF8	100	97.353	Panthera_tigris_altaica
ENSFHEG00000021084	prpf8	100	97.438	ENSPTRG00000039576	PRPF8	100	97.438	Pan_troglodytes
ENSFHEG00000021084	prpf8	98	97.958	ENSPANG00000024607	PRPF8	98	97.958	Papio_anubis
ENSFHEG00000021084	prpf8	100	98.210	ENSPKIG00000011201	prpf8	100	98.210	Paramormyrops_kingsleyae
ENSFHEG00000021084	prpf8	100	97.395	ENSPSIG00000013393	PRPF8	100	97.395	Pelodiscus_sinensis
ENSFHEG00000021084	prpf8	100	97.438	ENSPEMG00000021699	Prpf8	100	97.438	Peromyscus_maniculatus_bairdii
ENSFHEG00000021084	prpf8	96	93.675	ENSPMAG00000005438	prpf8	100	93.719	Petromyzon_marinus
ENSFHEG00000021084	prpf8	100	97.353	ENSPCIG00000022603	PRPF8	100	97.813	Phascolarctos_cinereus
ENSFHEG00000021084	prpf8	100	98.601	ENSPFOG00000007005	prpf8	100	98.558	Poecilia_formosa
ENSFHEG00000021084	prpf8	100	97.438	ENSPLAG00000020777	prpf8	100	97.438	Poecilia_latipinna
ENSFHEG00000021084	prpf8	100	98.601	ENSPMEG00000004051	prpf8	100	98.558	Poecilia_mexicana
ENSFHEG00000021084	prpf8	100	98.847	ENSPREG00000021902	prpf8	100	98.847	Poecilia_reticulata
ENSFHEG00000021084	prpf8	100	97.438	ENSPPYG00000007777	PRPF8	100	97.438	Pongo_abelii
ENSFHEG00000021084	prpf8	90	96.287	ENSPCAG00000008938	PRPF8	90	96.287	Procavia_capensis
ENSFHEG00000021084	prpf8	100	97.438	ENSPCOG00000015182	PRPF8	100	97.438	Propithecus_coquereli
ENSFHEG00000021084	prpf8	93	98.392	ENSPVAG00000002134	PRPF8	93	98.392	Pteropus_vampyrus
ENSFHEG00000021084	prpf8	100	98.335	ENSPNYG00000016356	prpf8	100	98.335	Pundamilia_nyererei
ENSFHEG00000021084	prpf8	100	98.463	ENSPNAG00000009247	prpf8	100	98.463	Pygocentrus_nattereri
ENSFHEG00000021084	prpf8	100	97.395	ENSRNOG00000003495	Prpf8	100	97.395	Rattus_norvegicus
ENSFHEG00000021084	prpf8	100	97.438	ENSRBIG00000031219	PRPF8	100	97.456	Rhinopithecus_bieti
ENSFHEG00000021084	prpf8	100	97.438	ENSRROG00000038014	PRPF8	100	97.456	Rhinopithecus_roxellana
ENSFHEG00000021084	prpf8	98	62.602	YHR165C	PRP8	95	62.688	Saccharomyces_cerevisiae
ENSFHEG00000021084	prpf8	100	97.438	ENSSBOG00000029717	PRPF8	100	97.438	Saimiri_boliviensis_boliviensis
ENSFHEG00000021084	prpf8	100	97.310	ENSSHAG00000006167	PRPF8	100	97.310	Sarcophilus_harrisii
ENSFHEG00000021084	prpf8	100	98.463	ENSSFOG00015013905	prpf8	100	98.463	Scleropages_formosus
ENSFHEG00000021084	prpf8	100	98.548	ENSSMAG00000017736	prpf8	100	98.548	Scophthalmus_maximus
ENSFHEG00000021084	prpf8	100	98.804	ENSSDUG00000003029	prpf8	100	98.804	Seriola_dumerili
ENSFHEG00000021084	prpf8	68	99.499	ENSSLDG00000017096	prpf8	100	99.499	Seriola_lalandi_dorsalis
ENSFHEG00000021084	prpf8	87	94.263	ENSSARG00000002892	PRPF8	87	94.263	Sorex_araneus
ENSFHEG00000021084	prpf8	100	97.353	ENSSPUG00000007463	PRPF8	100	97.353	Sphenodon_punctatus
ENSFHEG00000021084	prpf8	100	98.207	ENSSPAG00000015639	prpf8	100	98.207	Stegastes_partitus
ENSFHEG00000021084	prpf8	100	97.438	ENSSSCG00000017817	PRPF8	100	97.438	Sus_scrofa
ENSFHEG00000021084	prpf8	100	97.566	ENSTGUG00000005648	-	100	97.566	Taeniopygia_guttata
ENSFHEG00000021084	prpf8	51	98.429	ENSTGUG00000015597	-	95	98.429	Taeniopygia_guttata
ENSFHEG00000021084	prpf8	100	98.335	ENSTRUG00000015906	prpf8	100	98.335	Takifugu_rubripes
ENSFHEG00000021084	prpf8	95	99.283	ENSTNIG00000003460	prpf8	99	99.283	Tetraodon_nigroviridis
ENSFHEG00000021084	prpf8	93	98.707	ENSTBEG00000006431	PRPF8	93	98.707	Tupaia_belangeri
ENSFHEG00000021084	prpf8	100	96.840	ENSTTRG00000006869	PRPF8	100	96.840	Tursiops_truncatus
ENSFHEG00000021084	prpf8	54	96.288	ENSUAMG00000015644	-	96	96.288	Ursus_americanus
ENSFHEG00000021084	prpf8	100	97.182	ENSUMAG00000009385	PRPF8	100	97.182	Ursus_maritimus
ENSFHEG00000021084	prpf8	71	97.561	ENSVPAG00000006063	-	71	97.561	Vicugna_pacos
ENSFHEG00000021084	prpf8	100	97.438	ENSVVUG00000021695	PRPF8	99	97.438	Vulpes_vulpes
ENSFHEG00000021084	prpf8	100	97.055	ENSXETG00000022259	prpf8	100	97.055	Xenopus_tropicalis
ENSFHEG00000021084	prpf8	100	99.061	ENSXCOG00000012775	prpf8	100	99.061	Xiphophorus_couchianus
ENSFHEG00000021084	prpf8	100	99.018	ENSXMAG00000008505	prpf8	100	99.018	Xiphophorus_maculatus