EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000021221 (Gene tree)
Gene ID: 105928500
Gene Symbol: rab13
Alias: cb764|hm:zeh0455
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 12554 bases
Position: chrKN811324.1:1070288-1082841
Accession: 105928500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000019303	MMR_HSR1	PF01926.23	7.1e-05	1	1
ENSFHEP00000019298	MMR_HSR1	PF01926.23	8.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000028504	-	3906	XM_012865789	ENSFHEP00000019298	200 (aa)	XP_012721243	UPI000644FEBF
ENSFHET00000028516	-	3992	-	ENSFHEP00000019303	183 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000021221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000021221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000021221	rab13	80	44.295	ENSFHEG00000006820	rab33ba	62	44.295
ENSFHEG00000021221	rab13	94	33.714	ENSFHEG00000016504	si:cabz01085950.1	89	32.609
ENSFHEG00000021221	rab13	96	39.106	ENSFHEG00000007101	RAB7A	86	39.106
ENSFHEG00000021221	rab13	93	44.767	ENSFHEG00000002885	-	81	44.767
ENSFHEG00000021221	rab13	98	43.575	ENSFHEG00000003018	rab25b	95	41.837
ENSFHEG00000021221	rab13	95	38.776	ENSFHEG00000018764	RAB9A	91	38.776
ENSFHEG00000021221	rab13	84	35.714	ENSFHEG00000003799	rheb	84	35.714
ENSFHEG00000021221	rab13	98	44.134	ENSFHEG00000022642	rab11ba	87	41.327
ENSFHEG00000021221	rab13	98	51.500	ENSFHEG00000022985	rab1ab	98	51.500
ENSFHEG00000021221	rab13	97	52.821	ENSFHEG00000014414	-	96	52.821
ENSFHEG00000021221	rab13	96	39.106	ENSFHEG00000005588	RAB7A	84	38.421
ENSFHEG00000021221	rab13	92	37.278	ENSFHEG00000010055	hrasb	88	37.278
ENSFHEG00000021221	rab13	63	31.624	ENSFHEG00000010692	arl3	62	31.624
ENSFHEG00000021221	rab13	96	55.429	ENSFHEG00000009378	rab15	82	55.429
ENSFHEG00000021221	rab13	93	45.349	ENSFHEG00000020877	RAB39B	81	45.349
ENSFHEG00000021221	rab13	86	44.937	ENSFHEG00000001477	-	65	43.275
ENSFHEG00000021221	rab13	85	40.000	ENSFHEG00000021111	rab9a	79	40.000
ENSFHEG00000021221	rab13	93	54.386	ENSFHEG00000014087	RAB15	83	53.143
ENSFHEG00000021221	rab13	60	57.798	ENSFHEG00000000767	si:dkey-16l2.16	70	57.798
ENSFHEG00000021221	rab13	93	42.442	ENSFHEG00000013106	rab42a	79	42.442
ENSFHEG00000021221	rab13	87	33.951	ENSFHEG00000015015	rabl2	60	33.951
ENSFHEG00000021221	rab13	89	46.951	ENSFHEG00000020035	rab18b	80	46.951
ENSFHEG00000021221	rab13	88	33.721	ENSFHEG00000019684	rasl11a	67	33.721
ENSFHEG00000021221	rab13	88	42.236	ENSFHEG00000012117	rab5c	83	39.459
ENSFHEG00000021221	rab13	98	42.778	ENSFHEG00000014186	rab25a	85	42.458
ENSFHEG00000021221	rab13	94	58.140	ENSFHEG00000022176	zgc:171927	90	54.124
ENSFHEG00000021221	rab13	98	51.020	ENSFHEG00000014924	rab1ba	97	51.020
ENSFHEG00000021221	rab13	55	47.525	ENSFHEG00000018056	rab38b	83	47.525
ENSFHEG00000021221	rab13	93	40.838	ENSFHEG00000015996	RAB41	87	40.838
ENSFHEG00000021221	rab13	94	41.270	ENSFHEG00000014070	rab5aa	88	41.270
ENSFHEG00000021221	rab13	94	40.104	ENSFHEG00000015268	-	86	40.104
ENSFHEG00000021221	rab13	93	49.123	ENSFHEG00000013918	rab30	84	49.123
ENSFHEG00000021221	rab13	97	45.198	ENSFHEG00000019668	rab11a	82	45.198
ENSFHEG00000021221	rab13	95	41.919	ENSFHEG00000011483	zgc:101559	84	41.919
ENSFHEG00000021221	rab13	96	34.375	ENSFHEG00000008212	rhebl1	96	34.375
ENSFHEG00000021221	rab13	85	36.420	ENSFHEG00000015993	RAB29	79	36.420
ENSFHEG00000021221	rab13	88	40.373	ENSFHEG00000012702	rab22a	83	40.373
ENSFHEG00000021221	rab13	90	30.952	ENSFHEG00000016103	-	78	30.952
ENSFHEG00000021221	rab13	92	47.024	ENSFHEG00000001296	rab2a	79	47.024
ENSFHEG00000021221	rab13	92	56.213	ENSFHEG00000004891	rab35b	100	48.780
ENSFHEG00000021221	rab13	87	48.428	ENSFHEG00000000832	rab11al	76	48.428
ENSFHEG00000021221	rab13	89	45.732	ENSFHEG00000019455	rab18a	88	42.703
ENSFHEG00000021221	rab13	94	38.728	ENSFHEG00000009108	kras	98	36.269
ENSFHEG00000021221	rab13	98	45.251	ENSFHEG00000022676	-	82	45.251
ENSFHEG00000021221	rab13	92	35.294	ENSFHEG00000004875	si:ch73-116o1.2	94	34.184
ENSFHEG00000021221	rab13	94	44.767	ENSFHEG00000010509	rab4a	81	44.767
ENSFHEG00000021221	rab13	90	37.158	ENSFHEG00000006551	rab36	68	37.158
ENSFHEG00000021221	rab13	92	41.667	ENSFHEG00000022141	rab33a	80	40.513
ENSFHEG00000021221	rab13	86	44.937	ENSFHEG00000022524	rab6bb	79	43.275
ENSFHEG00000021221	rab13	93	40.212	ENSFHEG00000012041	si:dkey-34d22.5	82	40.212
ENSFHEG00000021221	rab13	73	30.370	ENSFHEG00000019659	-	73	30.370
ENSFHEG00000021221	rab13	86	40.000	ENSFHEG00000013691	rab34a	62	40.000
ENSFHEG00000021221	rab13	94	35.859	ENSFHEG00000004532	rab34b	78	35.859
ENSFHEG00000021221	rab13	82	34.395	ENSFHEG00000019106	rasl11b	73	32.240
ENSFHEG00000021221	rab13	77	41.429	ENSFHEG00000018450	RAB14	72	41.135
ENSFHEG00000021221	rab13	91	38.953	ENSFHEG00000009417	rab9b	78	38.953
ENSFHEG00000021221	rab13	93	51.744	ENSFHEG00000004319	rab12	70	51.744
ENSFHEG00000021221	rab13	90	43.636	ENSFHEG00000000695	-	77	43.636
ENSFHEG00000021221	rab13	98	45.251	ENSFHEG00000018353	rab11bb	82	45.251
ENSFHEG00000021221	rab13	86	37.037	ENSFHEG00000002502	si:dkey-13a21.4	79	37.037
ENSFHEG00000021221	rab13	83	38.158	ENSFHEG00000023069	rab23	77	35.912

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000021221	rab13	95	85.549	ENSG00000143545	RAB13	99	75.743	Homo_sapiens
ENSFHEG00000021221	rab13	97	95.506	ENSACIG00000008584	rab13	86	95.506	Amphilophus_citrinellus
ENSFHEG00000021221	rab13	95	86.127	ENSANAG00000030247	-	99	76.238	Aotus_nancymaae
ENSFHEG00000021221	rab13	96	94.318	ENSAMXG00000030712	rab13	100	88.614	Astyanax_mexicanus
ENSFHEG00000021221	rab13	95	85.549	ENSBTAG00000017604	RAB13	85	85.549	Bos_taurus
ENSFHEG00000021221	rab13	88	47.531	WBGene00019317	K02E10.1	74	47.531	Caenorhabditis_elegans
ENSFHEG00000021221	rab13	95	85.549	ENSCJAG00000009933	-	99	75.743	Callithrix_jacchus
ENSFHEG00000021221	rab13	95	85.549	ENSCHIG00000022271	-	85	85.549	Capra_hircus
ENSFHEG00000021221	rab13	95	86.127	ENSCPOG00000011491	-	99	76.733	Cavia_porcellus
ENSFHEG00000021221	rab13	95	85.549	ENSCCAG00000028502	-	99	75.743	Cebus_capucinus
ENSFHEG00000021221	rab13	95	85.549	ENSCATG00000041779	-	99	75.743	Cercocebus_atys
ENSFHEG00000021221	rab13	95	85.549	ENSCLAG00000006603	-	99	76.214	Chinchilla_lanigera
ENSFHEG00000021221	rab13	95	85.549	ENSCANG00000036573	-	99	75.743	Colobus_angolensis_palliatus
ENSFHEG00000021221	rab13	95	84.393	ENSCGRG00001021505	Rab13	99	75.122	Cricetulus_griseus_chok1gshd
ENSFHEG00000021221	rab13	95	84.393	ENSCGRG00000012126	Rab13	99	75.122	Cricetulus_griseus_crigri
ENSFHEG00000021221	rab13	97	93.785	ENSCSEG00000002358	rab13	100	90.000	Cynoglossus_semilaevis
ENSFHEG00000021221	rab13	97	93.785	ENSDARG00000034771	rab13	100	89.000	Danio_rerio
ENSFHEG00000021221	rab13	95	86.705	ENSDORG00000001591	Rab13	99	77.723	Dipodomys_ordii
ENSFHEG00000021221	rab13	95	85.549	ENSEASG00005000683	-	99	75.743	Equus_asinus_asinus
ENSFHEG00000021221	rab13	95	85.549	ENSECAG00000016551	RAB13	99	75.743	Equus_caballus
ENSFHEG00000021221	rab13	95	82.081	ENSEEUG00000001233	-	100	72.906	Erinaceus_europaeus
ENSFHEG00000021221	rab13	97	92.090	ENSELUG00000012801	rab13	100	87.000	Esox_lucius
ENSFHEG00000021221	rab13	95	84.393	ENSFCAG00000045269	-	99	74.257	Felis_catus
ENSFHEG00000021221	rab13	72	88.636	ENSFDAG00000014469	-	100	88.636	Fukomys_damarensis
ENSFHEG00000021221	rab13	97	93.220	ENSGACG00000011925	rab13	99	89.500	Gasterosteus_aculeatus
ENSFHEG00000021221	rab13	96	84.659	ENSGAGG00000000742	-	100	78.109	Gopherus_agassizii
ENSFHEG00000021221	rab13	95	85.549	ENSGGOG00000023693	RAB13	99	75.743	Gorilla_gorilla
ENSFHEG00000021221	rab13	95	84.393	ENSHGLG00000008749	RAB13	99	74.627	Heterocephalus_glaber_female
ENSFHEG00000021221	rab13	95	84.393	ENSHGLG00100013608	RAB13	99	74.627	Heterocephalus_glaber_male
ENSFHEG00000021221	rab13	98	94.444	ENSHCOG00000007440	rab13	99	94.444	Hippocampus_comes
ENSFHEG00000021221	rab13	97	93.220	ENSIPUG00000003199	rab13	100	88.557	Ictalurus_punctatus
ENSFHEG00000021221	rab13	95	85.549	ENSSTOG00000011222	-	99	76.238	Ictidomys_tridecemlineatus
ENSFHEG00000021221	rab13	99	82.873	ENSJJAG00000010575	Rab13	99	76.238	Jaculus_jaculus
ENSFHEG00000021221	rab13	97	94.915	ENSKMAG00000001908	rab13	100	90.500	Kryptolebias_marmoratus
ENSFHEG00000021221	rab13	97	95.480	ENSLBEG00000026779	rab13	100	92.000	Labrus_bergylta
ENSFHEG00000021221	rab13	97	78.090	ENSLACG00000008103	-	100	78.090	Latimeria_chalumnae
ENSFHEG00000021221	rab13	95	85.549	ENSMFAG00000041018	RAB13	99	75.743	Macaca_fascicularis
ENSFHEG00000021221	rab13	95	85.549	ENSMNEG00000028951	-	99	75.743	Macaca_nemestrina
ENSFHEG00000021221	rab13	95	85.549	ENSMLEG00000042247	-	99	75.743	Mandrillus_leucophaeus
ENSFHEG00000021221	rab13	100	93.443	ENSMAMG00000014602	rab13	100	91.500	Mastacembelus_armatus
ENSFHEG00000021221	rab13	95	84.393	ENSMAUG00000015713	Rab13	99	74.757	Mesocricetus_auratus
ENSFHEG00000021221	rab13	96	85.143	ENSMICG00000010340	-	99	76.119	Microcebus_murinus
ENSFHEG00000021221	rab13	95	84.971	ENSMOCG00000021448	Rab13	99	75.728	Microtus_ochrogaster
ENSFHEG00000021221	rab13	96	85.227	ENSMODG00000017295	-	78	81.818	Monodelphis_domestica
ENSFHEG00000021221	rab13	95	83.815	MGP_CAROLIEiJ_G0025227	Rab13	85	83.815	Mus_caroli
ENSFHEG00000021221	rab13	95	83.815	ENSMUSG00000027935	Rab13	86	83.815	Mus_musculus
ENSFHEG00000021221	rab13	95	83.815	MGP_PahariEiJ_G0026671	Rab13	86	83.815	Mus_pahari
ENSFHEG00000021221	rab13	95	84.971	ENSNGAG00000010309	Rab13	99	76.617	Nannospalax_galili
ENSFHEG00000021221	rab13	97	94.915	ENSNBRG00000004124	rab13	100	90.500	Neolamprologus_brichardi
ENSFHEG00000021221	rab13	95	85.549	ENSNLEG00000028944	-	99	75.743	Nomascus_leucogenys
ENSFHEG00000021221	rab13	96	84.659	ENSMEUG00000009667	-	99	77.228	Notamacropus_eugenii
ENSFHEG00000021221	rab13	69	88.976	ENSODEG00000012634	-	100	88.976	Octodon_degus
ENSFHEG00000021221	rab13	95	84.393	ENSODEG00000010443	-	99	75.980	Octodon_degus
ENSFHEG00000021221	rab13	99	93.407	ENSONIG00000006340	rab13	100	87.129	Oreochromis_niloticus
ENSFHEG00000021221	rab13	95	85.549	ENSOCUG00000006286	-	97	85.549	Oryctolagus_cuniculus
ENSFHEG00000021221	rab13	97	94.915	ENSOMEG00000008210	rab13	100	90.000	Oryzias_melastigma
ENSFHEG00000021221	rab13	95	83.815	ENSOGAG00000016969	-	99	74.500	Otolemur_garnettii
ENSFHEG00000021221	rab13	95	85.549	ENSPPAG00000028435	-	99	75.743	Pan_paniscus
ENSFHEG00000021221	rab13	95	84.393	ENSPPRG00000008865	-	99	74.257	Panthera_pardus
ENSFHEG00000021221	rab13	95	85.549	ENSPTRG00000001370	RAB13	99	75.743	Pan_troglodytes
ENSFHEG00000021221	rab13	95	85.549	ENSPANG00000004479	-	99	75.743	Papio_anubis
ENSFHEG00000021221	rab13	100	91.803	ENSPMGG00000007680	rab13	100	90.000	Periophthalmus_magnuspinnatus
ENSFHEG00000021221	rab13	68	78.788	ENSPEMG00000017353	-	99	78.788	Peromyscus_maniculatus_bairdii
ENSFHEG00000021221	rab13	96	84.659	ENSPCIG00000029350	-	99	77.228	Phascolarctos_cinereus
ENSFHEG00000021221	rab13	98	97.207	ENSPLAG00000005832	RAB13	96	97.207	Poecilia_latipinna
ENSFHEG00000021221	rab13	100	95.000	ENSPREG00000017567	rab13	100	95.000	Poecilia_reticulata
ENSFHEG00000021221	rab13	95	85.549	ENSPPYG00000000790	-	99	75.743	Pongo_abelii
ENSFHEG00000021221	rab13	95	86.127	ENSPCOG00000012189	-	99	76.617	Propithecus_coquereli
ENSFHEG00000021221	rab13	95	84.393	ENSPVAG00000011095	-	99	76.119	Pteropus_vampyrus
ENSFHEG00000021221	rab13	97	94.944	ENSPNAG00000004189	rab13	94	94.944	Pygocentrus_nattereri
ENSFHEG00000021221	rab13	99	80.220	ENSRNOG00000016733	Rab13	99	74.020	Rattus_norvegicus
ENSFHEG00000021221	rab13	95	85.549	ENSRBIG00000008552	-	99	75.743	Rhinopithecus_bieti
ENSFHEG00000021221	rab13	95	85.549	ENSRROG00000036885	-	99	75.743	Rhinopithecus_roxellana
ENSFHEG00000021221	rab13	95	85.549	ENSSBOG00000020342	-	99	76.119	Saimiri_boliviensis_boliviensis
ENSFHEG00000021221	rab13	97	83.616	ENSSHAG00000011866	-	99	76.733	Sarcophilus_harrisii
ENSFHEG00000021221	rab13	99	81.868	ENSSSCG00000006564	-	99	75.743	Sus_scrofa
ENSFHEG00000021221	rab13	96	96.023	ENSTRUG00000024177	rab13	100	91.500	Takifugu_rubripes
ENSFHEG00000021221	rab13	95	86.127	ENSTBEG00000012734	-	99	76.733	Tupaia_belangeri
ENSFHEG00000021221	rab13	95	85.549	ENSTTRG00000011183	-	99	75.743	Tursiops_truncatus
ENSFHEG00000021221	rab13	78	76.389	ENSXETG00000020729	rab13	100	70.807	Xenopus_tropicalis
ENSFHEG00000021221	rab13	98	96.648	ENSXCOG00000019533	rab13	96	96.648	Xiphophorus_couchianus