EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000021773 (Gene tree)
Gene ID: 105938677
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 9458 bases
Position: chrKN811547.1:3448929-3458386
Accession: 105938677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000019853	MMR_HSR1	PF01926.23	1.3e-05	1	1
ENSFHEP00000034206	MMR_HSR1	PF01926.23	1.6e-05	1	1
ENSFHEP00000019871	MMR_HSR1	PF01926.23	2.1e-05	1	1
ENSFHEP00000019872	MMR_HSR1	PF01926.23	2.2e-05	1	1
ENSFHEP00000019859	MMR_HSR1	PF01926.23	0.00012	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000029233	-	4696	-	ENSFHEP00000019872	223 (aa)	-	-
ENSFHET00000029211	-	399	-	ENSFHEP00000019859	132 (aa)	-	-
ENSFHET00000029200	-	1123	-	ENSFHEP00000019853	182 (aa)	-	-
ENSFHET00000029228	-	4460	-	ENSFHEP00000019871	221 (aa)	-	-
ENSFHET00000029240	-	4809	XM_012880500	ENSFHEP00000034206	198 (aa)	XP_012735954	UPI0006451DE3

Gene Model

Click here to download ENSFHEG00000021773's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000021773's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000021773	sar1ab	86	31.792	ENSFHEG00000010692	arl3	87	31.792
ENSFHEG00000021773	sar1ab	70	34.783	ENSFHEG00000013677	arl5c	64	35.965
ENSFHEG00000021773	sar1ab	74	33.813	ENSFHEG00000016443	ARL10	65	33.562
ENSFHEG00000021773	sar1ab	100	80.808	ENSFHEG00000012352	-	100	80.808
ENSFHEG00000021773	sar1ab	67	33.708	ENSFHEG00000016231	arl5a	62	32.432
ENSFHEG00000021773	sar1ab	89	33.333	ENSFHEG00000005294	arl2	92	33.333
ENSFHEG00000021773	sar1ab	94	30.000	ENSFHEG00000019002	arf2b	96	30.000
ENSFHEG00000021773	sar1ab	85	30.088	ENSFHEG00000020247	arl8ba	69	35.938
ENSFHEG00000021773	sar1ab	87	30.061	ENSFHEG00000009894	arl4cb	80	30.061
ENSFHEG00000021773	sar1ab	84	31.183	ENSFHEG00000004171	arl1	92	31.183
ENSFHEG00000021773	sar1ab	74	33.094	ENSFHEG00000018721	arl14	69	33.094
ENSFHEG00000021773	sar1ab	87	30.857	ENSFHEG00000023119	arf5	89	30.857
ENSFHEG00000021773	sar1ab	79	33.793	ENSFHEG00000019579	arl8bb	70	33.775
ENSFHEG00000021773	sar1ab	94	31.579	ENSFHEG00000000850	ARL6	97	30.729
ENSFHEG00000021773	sar1ab	67	38.298	ENSFHEG00000013017	-	62	35.537
ENSFHEG00000021773	sar1ab	79	35.577	ENSFHEG00000023396	-	78	32.867
ENSFHEG00000021773	sar1ab	94	31.053	ENSFHEG00000005859	-	97	31.053
ENSFHEG00000021773	sar1ab	73	31.959	ENSFHEG00000000334	arl3l2	57	31.959
ENSFHEG00000021773	sar1ab	72	30.000	ENSFHEG00000000458	arfrp1	54	30.000
ENSFHEG00000021773	sar1ab	100	80.808	ENSFHEG00000019865	sar1b	100	80.808
ENSFHEG00000021773	sar1ab	67	38.710	ENSFHEG00000009487	arl4aa	66	34.351
ENSFHEG00000021773	sar1ab	84	32.934	ENSFHEG00000019659	-	87	32.934
ENSFHEG00000021773	sar1ab	79	35.577	ENSFHEG00000011714	-	96	30.811
ENSFHEG00000021773	sar1ab	88	34.078	ENSFHEG00000009562	-	84	34.078
ENSFHEG00000021773	sar1ab	79	35.577	ENSFHEG00000008118	arf3b	78	32.867
ENSFHEG00000021773	sar1ab	87	31.977	ENSFHEG00000018216	-	79	31.977

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000021773	sar1ab	100	91.414	ENSACIG00000019827	sar1ab	100	91.414	Amphilophus_citrinellus
ENSFHEG00000021773	sar1ab	100	91.919	ENSAOCG00000022062	sar1ab	100	91.919	Amphiprion_ocellaris
ENSFHEG00000021773	sar1ab	100	91.919	ENSAPEG00000011525	sar1ab	100	91.919	Amphiprion_percula
ENSFHEG00000021773	sar1ab	100	90.404	ENSATEG00000003466	sar1ab	100	90.404	Anabas_testudineus
ENSFHEG00000021773	sar1ab	100	88.889	ENSACLG00000013053	sar1ab	100	88.889	Astatotilapia_calliptera
ENSFHEG00000021773	sar1ab	100	90.404	ENSCSEG00000004825	sar1ab	100	90.404	Cynoglossus_semilaevis
ENSFHEG00000021773	sar1ab	100	95.960	ENSCVAG00000015162	sar1ab	100	95.960	Cyprinodon_variegatus
ENSFHEG00000021773	sar1ab	100	79.293	ENSCVAG00000006500	-	100	79.293	Cyprinodon_variegatus
ENSFHEG00000021773	sar1ab	100	85.354	ENSDARG00000033320	sar1ab	100	85.354	Danio_rerio
ENSFHEG00000021773	sar1ab	100	80.303	ENSELUG00000013652	sar1a	100	80.303	Esox_lucius
ENSFHEG00000021773	sar1ab	100	87.374	ENSELUG00000024279	sar1ab	100	87.374	Esox_lucius
ENSFHEG00000021773	sar1ab	100	89.394	ENSGMOG00000012588	sar1ab	100	89.394	Gadus_morhua
ENSFHEG00000021773	sar1ab	100	94.444	ENSGAFG00000009702	sar1ab	100	94.444	Gambusia_affinis
ENSFHEG00000021773	sar1ab	100	80.808	ENSGAFG00000004846	-	100	80.808	Gambusia_affinis
ENSFHEG00000021773	sar1ab	100	89.394	ENSGACG00000008616	sar1ab	100	89.394	Gasterosteus_aculeatus
ENSFHEG00000021773	sar1ab	100	88.889	ENSHBUG00000021221	sar1ab	100	88.889	Haplochromis_burtoni
ENSFHEG00000021773	sar1ab	100	87.879	ENSHCOG00000002845	sar1ab	81	87.065	Hippocampus_comes
ENSFHEG00000021773	sar1ab	100	93.434	ENSKMAG00000018006	sar1ab	100	93.434	Kryptolebias_marmoratus
ENSFHEG00000021773	sar1ab	100	89.899	ENSLBEG00000001114	sar1ab	100	89.899	Labrus_bergylta
ENSFHEG00000021773	sar1ab	100	90.404	ENSMAMG00000021314	sar1ab	100	90.404	Mastacembelus_armatus
ENSFHEG00000021773	sar1ab	100	88.889	ENSMZEG00005027606	sar1ab	100	88.889	Maylandia_zebra
ENSFHEG00000021773	sar1ab	100	91.414	ENSMMOG00000010360	sar1ab	100	91.414	Mola_mola
ENSFHEG00000021773	sar1ab	100	88.889	ENSMALG00000005831	sar1ab	100	88.889	Monopterus_albus
ENSFHEG00000021773	sar1ab	100	89.394	ENSNBRG00000018772	sar1ab	100	89.394	Neolamprologus_brichardi
ENSFHEG00000021773	sar1ab	100	90.404	ENSONIG00000018509	sar1ab	100	90.404	Oreochromis_niloticus
ENSFHEG00000021773	sar1ab	100	89.899	ENSORLG00000006779	sar1ab	67	89.899	Oryzias_latipes
ENSFHEG00000021773	sar1ab	100	79.798	ENSORLG00000009132	-	100	72.646	Oryzias_latipes
ENSFHEG00000021773	sar1ab	100	79.798	ENSORLG00020007024	-	100	72.646	Oryzias_latipes_hni
ENSFHEG00000021773	sar1ab	100	89.394	ENSORLG00020005458	sar1ab	100	89.394	Oryzias_latipes_hni
ENSFHEG00000021773	sar1ab	100	79.293	ENSORLG00015006223	-	94	83.036	Oryzias_latipes_hsok
ENSFHEG00000021773	sar1ab	100	89.899	ENSORLG00015010542	sar1ab	100	89.899	Oryzias_latipes_hsok
ENSFHEG00000021773	sar1ab	100	91.414	ENSOMEG00000004948	sar1ab	100	91.414	Oryzias_melastigma
ENSFHEG00000021773	sar1ab	100	79.293	ENSOMEG00000012020	-	100	79.293	Oryzias_melastigma
ENSFHEG00000021773	sar1ab	100	81.313	ENSPKIG00000007615	sar1ab	100	81.313	Paramormyrops_kingsleyae
ENSFHEG00000021773	sar1ab	100	90.909	ENSPMGG00000013330	sar1ab	100	90.909	Periophthalmus_magnuspinnatus
ENSFHEG00000021773	sar1ab	100	95.960	ENSPFOG00000023432	sar1ab	100	95.960	Poecilia_formosa
ENSFHEG00000021773	sar1ab	100	95.455	ENSPLAG00000023705	sar1ab	100	95.455	Poecilia_latipinna
ENSFHEG00000021773	sar1ab	100	80.303	ENSPMEG00000001717	-	100	80.303	Poecilia_mexicana
ENSFHEG00000021773	sar1ab	100	95.960	ENSPMEG00000000559	sar1ab	100	95.960	Poecilia_mexicana
ENSFHEG00000021773	sar1ab	100	95.960	ENSPREG00000016098	sar1ab	100	95.960	Poecilia_reticulata
ENSFHEG00000021773	sar1ab	100	89.394	ENSPNYG00000011603	sar1ab	100	89.394	Pundamilia_nyererei
ENSFHEG00000021773	sar1ab	100	85.859	ENSPNAG00000008007	sar1ab	100	85.859	Pygocentrus_nattereri
ENSFHEG00000021773	sar1ab	100	84.343	ENSSFOG00015014010	sar1a	100	84.343	Scleropages_formosus
ENSFHEG00000021773	sar1ab	97	82.576	ENSSMAG00000020758	sar1ab	95	82.576	Scophthalmus_maximus
ENSFHEG00000021773	sar1ab	100	90.909	ENSSDUG00000010773	sar1ab	100	90.909	Seriola_dumerili
ENSFHEG00000021773	sar1ab	100	90.909	ENSSLDG00000025558	sar1ab	100	90.909	Seriola_lalandi_dorsalis
ENSFHEG00000021773	sar1ab	100	92.424	ENSSPAG00000009194	sar1ab	100	92.424	Stegastes_partitus
ENSFHEG00000021773	sar1ab	100	90.404	ENSTRUG00000007269	sar1ab	100	90.404	Takifugu_rubripes
ENSFHEG00000021773	sar1ab	100	88.889	ENSTNIG00000008635	sar1ab	100	88.889	Tetraodon_nigroviridis
ENSFHEG00000021773	sar1ab	100	81.313	ENSXMAG00000026223	SAR1A	100	81.313	Xiphophorus_maculatus
ENSFHEG00000021773	sar1ab	100	94.949	ENSXMAG00000003130	sar1ab	100	94.949	Xiphophorus_maculatus