EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000021990 (Gene tree)
Gene ID: 105927926
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 56153 bases
Position: chrKN811315.1:1426135-1482287
Accession: 105927926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000019991	RRM_1	PF00076.22	4.8e-06	1	1
ENSFHEP00000034300	RRM_1	PF00076.22	6.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000029390	-	2310	-	ENSFHEP00000019991	769 (aa)	-	-
ENSFHET00000029425	-	7594	XM_012864937	ENSFHEP00000034300	1270 (aa)	XP_012720391	UPI0006448EBE

Gene Model

Click here to download ENSFHEG00000021990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000021990's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000021990	ppargc1a	100	52.241	ENSG00000109819	PPARGC1A	96	69.178	Homo_sapiens
ENSFHEG00000021990	ppargc1a	100	95.102	ENSAPOG00000018632	ppargc1a	99	95.851	Acanthochromis_polyacanthus
ENSFHEG00000021990	ppargc1a	65	78.659	ENSAMEG00000010421	PPARGC1A	89	73.980	Ailuropoda_melanoleuca
ENSFHEG00000021990	ppargc1a	100	74.510	ENSACIG00000009732	ppargc1a	100	94.606	Amphilophus_citrinellus
ENSFHEG00000021990	ppargc1a	100	95.102	ENSAOCG00000006754	ppargc1a	99	95.851	Amphiprion_ocellaris
ENSFHEG00000021990	ppargc1a	100	79.853	ENSAPEG00000022574	ppargc1a	99	95.851	Amphiprion_percula
ENSFHEG00000021990	ppargc1a	99	93.878	ENSATEG00000016702	ppargc1a	100	94.606	Anabas_testudineus
ENSFHEG00000021990	ppargc1a	50	73.973	ENSAPLG00000005303	PPARGC1A	64	73.973	Anas_platyrhynchos
ENSFHEG00000021990	ppargc1a	100	53.976	ENSACAG00000000741	PPARGC1A	100	52.364	Anolis_carolinensis
ENSFHEG00000021990	ppargc1a	100	50.118	ENSANAG00000035930	PPARGC1A	53	74.737	Aotus_nancymaae
ENSFHEG00000021990	ppargc1a	97	92.704	ENSACLG00000001002	ppargc1a	99	95.436	Astatotilapia_calliptera
ENSFHEG00000021990	ppargc1a	97	85.957	ENSAMXG00000002461	ppargc1a	99	64.484	Astyanax_mexicanus
ENSFHEG00000021990	ppargc1a	71	51.783	ENSBTAG00000017024	PPARGC1A	100	53.584	Bos_taurus
ENSFHEG00000021990	ppargc1a	100	52.476	ENSCJAG00000013024	PPARGC1A	100	53.373	Callithrix_jacchus
ENSFHEG00000021990	ppargc1a	71	70.539	ENSCAFG00000016519	PPARGC1A	100	53.253	Canis_familiaris
ENSFHEG00000021990	ppargc1a	69	69.124	ENSCAFG00020027242	PPARGC1A	99	52.861	Canis_lupus_dingo
ENSFHEG00000021990	ppargc1a	70	70.539	ENSCHIG00000015991	PPARGC1A	99	52.206	Capra_hircus
ENSFHEG00000021990	ppargc1a	100	52.358	ENSTSYG00000010439	PPARGC1A	53	75.263	Carlito_syrichta
ENSFHEG00000021990	ppargc1a	58	78.049	ENSCAPG00000005150	PPARGC1A	82	74.737	Cavia_aperea
ENSFHEG00000021990	ppargc1a	63	78.049	ENSCPOG00000001518	PPARGC1A	90	74.737	Cavia_porcellus
ENSFHEG00000021990	ppargc1a	100	52.358	ENSCCAG00000024681	PPARGC1A	90	74.737	Cebus_capucinus
ENSFHEG00000021990	ppargc1a	100	52.358	ENSCATG00000032575	PPARGC1A	90	75.263	Cercocebus_atys
ENSFHEG00000021990	ppargc1a	100	52.061	ENSCLAG00000002058	PPARGC1A	53	74.211	Chinchilla_lanigera
ENSFHEG00000021990	ppargc1a	100	52.358	ENSCSAG00000016575	PPARGC1A	90	75.263	Chlorocebus_sabaeus
ENSFHEG00000021990	ppargc1a	71	69.547	ENSCANG00000033426	PPARGC1A	100	53.550	Colobus_angolensis_palliatus
ENSFHEG00000021990	ppargc1a	100	52.302	ENSCGRG00001015534	Ppargc1a	87	73.158	Cricetulus_griseus_chok1gshd
ENSFHEG00000021990	ppargc1a	100	52.302	ENSCGRG00000000200	Ppargc1a	87	73.158	Cricetulus_griseus_crigri
ENSFHEG00000021990	ppargc1a	100	94.694	ENSCSEG00000006884	ppargc1a	96	96.537	Cynoglossus_semilaevis
ENSFHEG00000021990	ppargc1a	70	84.417	ENSCVAG00000016547	ppargc1a	100	84.417	Cyprinodon_variegatus
ENSFHEG00000021990	ppargc1a	74	85.380	ENSDARG00000067829	ppargc1a	67	85.380	Danio_rerio
ENSFHEG00000021990	ppargc1a	100	53.749	ENSDNOG00000041106	PPARGC1A	90	74.869	Dasypus_novemcinctus
ENSFHEG00000021990	ppargc1a	51	69.604	ENSDORG00000016276	Ppargc1a	98	53.194	Dipodomys_ordii
ENSFHEG00000021990	ppargc1a	71	70.124	ENSEASG00005007984	PPARGC1A	100	52.714	Equus_asinus_asinus
ENSFHEG00000021990	ppargc1a	70	69.469	ENSECAG00000009164	PPARGC1A	97	52.768	Equus_caballus
ENSFHEG00000021990	ppargc1a	98	52.778	ENSEEUG00000009219	PPARGC1A	90	72.165	Erinaceus_europaeus
ENSFHEG00000021990	ppargc1a	96	90.171	ENSELUG00000017027	ppargc1a	94	89.787	Esox_lucius
ENSFHEG00000021990	ppargc1a	69	74.429	ENSFCAG00000000043	PPARGC1A	64	74.429	Felis_catus
ENSFHEG00000021990	ppargc1a	98	49.531	ENSFALG00000009211	PPARGC1A	85	78.977	Ficedula_albicollis
ENSFHEG00000021990	ppargc1a	100	50.236	ENSFDAG00000005659	PPARGC1A	66	70.124	Fukomys_damarensis
ENSFHEG00000021990	ppargc1a	69	74.429	ENSGALG00000042851	PPARGC1A	100	53.269	Gallus_gallus
ENSFHEG00000021990	ppargc1a	98	96.680	ENSGAFG00000015514	ppargc1a	99	96.680	Gambusia_affinis
ENSFHEG00000021990	ppargc1a	99	52.308	ENSGAGG00000007043	PPARGC1A	87	78.977	Gopherus_agassizii
ENSFHEG00000021990	ppargc1a	100	52.594	ENSGGOG00000009810	PPARGC1A	100	53.430	Gorilla_gorilla
ENSFHEG00000021990	ppargc1a	100	80.503	ENSHBUG00000005269	ppargc1a	100	95.851	Haplochromis_burtoni
ENSFHEG00000021990	ppargc1a	98	52.328	ENSHGLG00000007022	PPARGC1A	65	69.778	Heterocephalus_glaber_female
ENSFHEG00000021990	ppargc1a	100	52.764	ENSHGLG00100000133	PPARGC1A	66	70.124	Heterocephalus_glaber_male
ENSFHEG00000021990	ppargc1a	98	91.020	ENSHCOG00000014886	ppargc1a	92	91.701	Hippocampus_comes
ENSFHEG00000021990	ppargc1a	95	96.053	ENSIPUG00000020313	ppargc1a	59	96.053	Ictalurus_punctatus
ENSFHEG00000021990	ppargc1a	100	51.943	ENSSTOG00000012522	PPARGC1A	53	74.211	Ictidomys_tridecemlineatus
ENSFHEG00000021990	ppargc1a	100	82.323	ENSKMAG00000005390	ppargc1a	95	95.614	Kryptolebias_marmoratus
ENSFHEG00000021990	ppargc1a	96	95.436	ENSLBEG00000019562	ppargc1a	99	95.436	Labrus_bergylta
ENSFHEG00000021990	ppargc1a	62	76.923	ENSLACG00000014054	PPARGC1A	86	77.436	Latimeria_chalumnae
ENSFHEG00000021990	ppargc1a	89	88.889	ENSLOCG00000012350	ppargc1a	69	88.889	Lepisosteus_oculatus
ENSFHEG00000021990	ppargc1a	100	53.253	ENSLAFG00000012981	PPARGC1A	54	71.500	Loxodonta_africana
ENSFHEG00000021990	ppargc1a	100	52.358	ENSMFAG00000000534	PPARGC1A	90	75.263	Macaca_fascicularis
ENSFHEG00000021990	ppargc1a	100	52.241	ENSMMUG00000001844	PPARGC1A	89	78.125	Macaca_mulatta
ENSFHEG00000021990	ppargc1a	100	52.241	ENSMNEG00000028682	PPARGC1A	90	75.263	Macaca_nemestrina
ENSFHEG00000021990	ppargc1a	100	52.358	ENSMLEG00000034233	PPARGC1A	90	75.263	Mandrillus_leucophaeus
ENSFHEG00000021990	ppargc1a	99	95.102	ENSMAMG00000005531	ppargc1a	92	95.851	Mastacembelus_armatus
ENSFHEG00000021990	ppargc1a	99	94.286	ENSMZEG00005001739	ppargc1a	100	78.571	Maylandia_zebra
ENSFHEG00000021990	ppargc1a	50	74.429	ENSMGAG00000012485	PPARGC1A	100	53.809	Meleagris_gallopavo
ENSFHEG00000021990	ppargc1a	100	50.767	ENSMAUG00000011811	Ppargc1a	87	73.684	Mesocricetus_auratus
ENSFHEG00000021990	ppargc1a	100	52.638	ENSMICG00000015390	PPARGC1A	90	75.263	Microcebus_murinus
ENSFHEG00000021990	ppargc1a	100	53.373	ENSMOCG00000008765	Ppargc1a	87	73.684	Microtus_ochrogaster
ENSFHEG00000021990	ppargc1a	99	93.061	ENSMMOG00000011847	ppargc1a	92	94.191	Mola_mola
ENSFHEG00000021990	ppargc1a	63	79.268	ENSMODG00000000549	PPARGC1A	88	75.897	Monodelphis_domestica
ENSFHEG00000021990	ppargc1a	100	92.653	ENSMALG00000004625	ppargc1a	89	93.361	Monopterus_albus
ENSFHEG00000021990	ppargc1a	100	51.896	MGP_CAROLIEiJ_G0027213	Ppargc1a	87	72.105	Mus_caroli
ENSFHEG00000021990	ppargc1a	100	52.251	ENSMUSG00000029167	Ppargc1a	87	72.105	Mus_musculus
ENSFHEG00000021990	ppargc1a	100	50.297	MGP_PahariEiJ_G0016995	Ppargc1a	85	72.146	Mus_pahari
ENSFHEG00000021990	ppargc1a	100	50.771	MGP_SPRETEiJ_G0028208	Ppargc1a	87	71.579	Mus_spretus
ENSFHEG00000021990	ppargc1a	63	78.659	ENSMPUG00000016736	PPARGC1A	88	74.429	Mustela_putorius_furo
ENSFHEG00000021990	ppargc1a	100	54.524	ENSMLUG00000016307	PPARGC1A	64	73.973	Myotis_lucifugus
ENSFHEG00000021990	ppargc1a	100	52.467	ENSNGAG00000015090	Ppargc1a	100	53.293	Nannospalax_galili
ENSFHEG00000021990	ppargc1a	100	81.037	ENSNBRG00000023403	ppargc1a	99	95.851	Neolamprologus_brichardi
ENSFHEG00000021990	ppargc1a	100	52.948	ENSOPRG00000012899	PPARGC1A	63	69.136	Ochotona_princeps
ENSFHEG00000021990	ppargc1a	100	72.066	ENSONIG00000007635	ppargc1a	96	85.892	Oreochromis_niloticus
ENSFHEG00000021990	ppargc1a	71	52.891	ENSOANG00000006680	PPARGC1A	51	79.545	Ornithorhynchus_anatinus
ENSFHEG00000021990	ppargc1a	100	53.076	ENSOCUG00000014668	PPARGC1A	100	52.913	Oryctolagus_cuniculus
ENSFHEG00000021990	ppargc1a	100	94.286	ENSORLG00000004788	ppargc1a	99	95.021	Oryzias_latipes
ENSFHEG00000021990	ppargc1a	100	94.286	ENSORLG00020014690	ppargc1a	95	95.021	Oryzias_latipes_hni
ENSFHEG00000021990	ppargc1a	100	93.878	ENSORLG00015012206	ppargc1a	99	94.606	Oryzias_latipes_hsok
ENSFHEG00000021990	ppargc1a	97	93.878	ENSOMEG00000000670	ppargc1a	100	94.606	Oryzias_melastigma
ENSFHEG00000021990	ppargc1a	100	52.638	ENSOGAG00000014559	PPARGC1A	53	73.684	Otolemur_garnettii
ENSFHEG00000021990	ppargc1a	70	70.539	ENSOARG00000005581	PPARGC1A	64	70.539	Ovis_aries
ENSFHEG00000021990	ppargc1a	100	52.123	ENSPPAG00000034694	PPARGC1A	53	75.263	Pan_paniscus
ENSFHEG00000021990	ppargc1a	93	78.571	ENSPPRG00000001711	PPARGC1A	92	60.194	Panthera_pardus
ENSFHEG00000021990	ppargc1a	93	78.571	ENSPTIG00000007378	PPARGC1A	92	60.194	Panthera_tigris_altaica
ENSFHEG00000021990	ppargc1a	100	52.241	ENSPTRG00000015954	PPARGC1A	53	75.263	Pan_troglodytes
ENSFHEG00000021990	ppargc1a	100	52.066	ENSPANG00000005420	PPARGC1A	90	75.263	Papio_anubis
ENSFHEG00000021990	ppargc1a	93	74.468	ENSPKIG00000002531	ppargc1a	86	74.468	Paramormyrops_kingsleyae
ENSFHEG00000021990	ppargc1a	70	73.973	ENSPSIG00000011790	PPARGC1A	100	52.606	Pelodiscus_sinensis
ENSFHEG00000021990	ppargc1a	99	71.523	ENSPMGG00000019204	ppargc1a	92	87.552	Periophthalmus_magnuspinnatus
ENSFHEG00000021990	ppargc1a	100	50.708	ENSPEMG00000010892	Ppargc1a	87	72.775	Peromyscus_maniculatus_bairdii
ENSFHEG00000021990	ppargc1a	69	75.342	ENSPCIG00000015835	PPARGC1A	88	75.342	Phascolarctos_cinereus
ENSFHEG00000021990	ppargc1a	98	98.333	ENSPFOG00000001263	ppargc1a	92	98.340	Poecilia_formosa
ENSFHEG00000021990	ppargc1a	100	86.768	ENSPLAG00000002827	ppargc1a	98	98.340	Poecilia_latipinna
ENSFHEG00000021990	ppargc1a	98	97.917	ENSPMEG00000000720	ppargc1a	100	90.745	Poecilia_mexicana
ENSFHEG00000021990	ppargc1a	98	98.340	ENSPREG00000019171	ppargc1a	99	98.340	Poecilia_reticulata
ENSFHEG00000021990	ppargc1a	100	52.241	ENSPPYG00000014640	PPARGC1A	53	75.263	Pongo_abelii
ENSFHEG00000021990	ppargc1a	100	52.764	ENSPCAG00000016308	PPARGC1A	51	74.432	Procavia_capensis
ENSFHEG00000021990	ppargc1a	100	52.830	ENSPCOG00000022858	PPARGC1A	53	75.263	Propithecus_coquereli
ENSFHEG00000021990	ppargc1a	99	94.694	ENSPNYG00000006846	ppargc1a	99	95.851	Pundamilia_nyererei
ENSFHEG00000021990	ppargc1a	97	86.383	ENSPNAG00000010393	ppargc1a	90	94.737	Pygocentrus_nattereri
ENSFHEG00000021990	ppargc1a	100	51.712	ENSRNOG00000004473	Ppargc1a	87	72.632	Rattus_norvegicus
ENSFHEG00000021990	ppargc1a	71	69.547	ENSRBIG00000032333	PPARGC1A	100	53.791	Rhinopithecus_bieti
ENSFHEG00000021990	ppargc1a	71	69.547	ENSRROG00000010419	PPARGC1A	100	53.069	Rhinopithecus_roxellana
ENSFHEG00000021990	ppargc1a	100	52.778	ENSSBOG00000006423	PPARGC1A	100	53.189	Saimiri_boliviensis_boliviensis
ENSFHEG00000021990	ppargc1a	69	75.342	ENSSHAG00000010033	PPARGC1A	84	75.342	Sarcophilus_harrisii
ENSFHEG00000021990	ppargc1a	86	78.571	ENSSFOG00015001633	ppargc1a	80	72.269	Scleropages_formosus
ENSFHEG00000021990	ppargc1a	100	53.044	ENSSFOG00015018522	ppargc1a	90	71.429	Scleropages_formosus
ENSFHEG00000021990	ppargc1a	100	93.469	ENSSMAG00000011571	ppargc1a	95	95.614	Scophthalmus_maximus
ENSFHEG00000021990	ppargc1a	100	74.754	ENSSDUG00000007408	ppargc1a	97	96.970	Seriola_dumerili
ENSFHEG00000021990	ppargc1a	100	79.406	ENSSLDG00000006987	ppargc1a	93	95.436	Seriola_lalandi_dorsalis
ENSFHEG00000021990	ppargc1a	87	75.200	ENSSARG00000000575	PPARGC1A	83	75.200	Sorex_araneus
ENSFHEG00000021990	ppargc1a	100	53.261	ENSSPUG00000013556	PPARGC1A	100	53.027	Sphenodon_punctatus
ENSFHEG00000021990	ppargc1a	98	94.783	ENSSPAG00000023514	ppargc1a	99	95.851	Stegastes_partitus
ENSFHEG00000021990	ppargc1a	66	78.659	ENSSSCG00000029275	PPARGC1A	90	75.263	Sus_scrofa
ENSFHEG00000021990	ppargc1a	100	53.576	ENSTGUG00000009487	PPARGC1A	100	51.246	Taeniopygia_guttata
ENSFHEG00000021990	ppargc1a	87	88.824	ENSTRUG00000007210	ppargc1a	85	89.157	Takifugu_rubripes
ENSFHEG00000021990	ppargc1a	71	70.539	ENSTTRG00000005327	PPARGC1A	87	78.788	Tursiops_truncatus
ENSFHEG00000021990	ppargc1a	60	77.914	ENSUAMG00000020843	PPARGC1A	85	78.409	Ursus_americanus
ENSFHEG00000021990	ppargc1a	63	78.659	ENSUMAG00000003557	PPARGC1A	89	73.980	Ursus_maritimus
ENSFHEG00000021990	ppargc1a	71	70.539	ENSVVUG00000013365	PPARGC1A	90	73.980	Vulpes_vulpes
ENSFHEG00000021990	ppargc1a	100	52.439	ENSXETG00000020468	ppargc1a	76	77.273	Xenopus_tropicalis
ENSFHEG00000021990	ppargc1a	96	97.917	ENSXCOG00000004835	ppargc1a	94	97.925	Xiphophorus_couchianus
ENSFHEG00000021990	ppargc1a	98	97.500	ENSXMAG00000007748	ppargc1a	100	90.637	Xiphophorus_maculatus