EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000022133 (Gene tree)
Gene ID: 105930143
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 55324 bases
Position: chrKN811348.1:1513088-1568411
Accession: 105930143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000034388	CPSF_A	PF03178.15	1.8e-51	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000029575	-	3093	XM_021319336	ENSFHEP00000034388	1030 (aa)	XP_021175011	-

Gene Model

Click here to download ENSFHEG00000022133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022133's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022133	ddb1	98	90.588	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSFHEG00000022133	ddb1	97	96.516	ENSAPOG00000005036	ddb1	89	98.947	Acanthochromis_polyacanthus
ENSFHEG00000022133	ddb1	98	90.670	ENSAMEG00000016518	DDB1	90	90.588	Ailuropoda_melanoleuca
ENSFHEG00000022133	ddb1	84	98.947	ENSACIG00000020624	ddb1	89	98.947	Amphilophus_citrinellus
ENSFHEG00000022133	ddb1	99	96.471	ENSAOCG00000003066	ddb1	90	96.471	Amphiprion_ocellaris
ENSFHEG00000022133	ddb1	99	96.471	ENSAPEG00000000092	ddb1	90	96.471	Amphiprion_percula
ENSFHEG00000022133	ddb1	93	98.370	ENSATEG00000020571	ddb1	89	98.947	Anabas_testudineus
ENSFHEG00000022133	ddb1	98	90.698	ENSAPLG00000007174	DDB1	90	90.698	Anas_platyrhynchos
ENSFHEG00000022133	ddb1	98	91.373	ENSACAG00000017758	DDB1	90	91.373	Anolis_carolinensis
ENSFHEG00000022133	ddb1	98	90.588	ENSANAG00000021878	DDB1	90	90.588	Aotus_nancymaae
ENSFHEG00000022133	ddb1	99	96.774	ENSACLG00000012401	ddb1	90	96.774	Astatotilapia_calliptera
ENSFHEG00000022133	ddb1	98	90.588	ENSBTAG00000021569	DDB1	84	90.588	Bos_taurus
ENSFHEG00000022133	ddb1	96	36.544	WBGene00010890	ddb-1	88	36.544	Caenorhabditis_elegans
ENSFHEG00000022133	ddb1	98	90.588	ENSCJAG00000019319	DDB1	90	90.588	Callithrix_jacchus
ENSFHEG00000022133	ddb1	98	90.670	ENSCAFG00000016264	DDB1	88	95.109	Canis_familiaris
ENSFHEG00000022133	ddb1	92	95.109	ENSCAFG00020012722	DDB1	88	95.109	Canis_lupus_dingo
ENSFHEG00000022133	ddb1	98	90.588	ENSCHIG00000014969	DDB1	90	90.588	Capra_hircus
ENSFHEG00000022133	ddb1	98	92.800	ENSTSYG00000008027	DDB1	90	92.800	Carlito_syrichta
ENSFHEG00000022133	ddb1	98	92.800	ENSCAPG00000010786	DDB1	90	92.800	Cavia_aperea
ENSFHEG00000022133	ddb1	98	92.800	ENSCPOG00000009956	DDB1	90	92.800	Cavia_porcellus
ENSFHEG00000022133	ddb1	98	90.588	ENSCCAG00000035883	DDB1	90	90.588	Cebus_capucinus
ENSFHEG00000022133	ddb1	98	92.400	ENSCATG00000044495	DDB1	89	92.400	Cercocebus_atys
ENSFHEG00000022133	ddb1	98	90.980	ENSCLAG00000004126	DDB1	90	90.980	Chinchilla_lanigera
ENSFHEG00000022133	ddb1	98	90.588	ENSCSAG00000006392	DDB1	90	90.588	Chlorocebus_sabaeus
ENSFHEG00000022133	ddb1	84	89.205	ENSCHOG00000011377	DDB1	80	84.737	Choloepus_hoffmanni
ENSFHEG00000022133	ddb1	98	91.765	ENSCPBG00000017728	DDB1	90	91.765	Chrysemys_picta_bellii
ENSFHEG00000022133	ddb1	98	62.387	ENSCING00000007437	-	89	62.387	Ciona_intestinalis
ENSFHEG00000022133	ddb1	91	62.251	ENSCSAVG00000004783	-	99	58.169	Ciona_savignyi
ENSFHEG00000022133	ddb1	98	92.400	ENSCANG00000019948	DDB1	90	92.400	Colobus_angolensis_palliatus
ENSFHEG00000022133	ddb1	98	90.670	ENSCGRG00001016599	Ddb1	90	90.588	Cricetulus_griseus_chok1gshd
ENSFHEG00000022133	ddb1	98	90.670	ENSCGRG00000013427	Ddb1	90	90.588	Cricetulus_griseus_crigri
ENSFHEG00000022133	ddb1	92	98.295	ENSCSEG00000012499	ddb1	89	98.947	Cynoglossus_semilaevis
ENSFHEG00000022133	ddb1	93	99.457	ENSCVAG00000019531	ddb1	89	99.457	Cyprinodon_variegatus
ENSFHEG00000022133	ddb1	99	95.312	ENSDARG00000074431	ddb1	90	95.312	Danio_rerio
ENSFHEG00000022133	ddb1	92	95.109	ENSDNOG00000014884	DDB1	87	95.109	Dasypus_novemcinctus
ENSFHEG00000022133	ddb1	80	95.000	ENSDORG00000000127	Ddb1	88	95.000	Dipodomys_ordii
ENSFHEG00000022133	ddb1	67	30.625	FBgn0024698	Cpsf160	55	30.625	Drosophila_melanogaster
ENSFHEG00000022133	ddb1	99	63.529	FBgn0260962	pic	90	63.529	Drosophila_melanogaster
ENSFHEG00000022133	ddb1	62	94.882	ENSETEG00000001053	-	57	94.882	Echinops_telfairi
ENSFHEG00000022133	ddb1	74	84.494	ENSEBUG00000014593	ddb1	86	83.355	Eptatretus_burgeri
ENSFHEG00000022133	ddb1	98	90.670	ENSEASG00005008184	DDB1	90	90.588	Equus_asinus_asinus
ENSFHEG00000022133	ddb1	98	90.670	ENSECAG00000012136	DDB1	90	90.588	Equus_caballus
ENSFHEG00000022133	ddb1	81	94.413	ENSEEUG00000003194	DDB1	75	94.413	Erinaceus_europaeus
ENSFHEG00000022133	ddb1	99	94.902	ENSELUG00000023868	ddb1	90	94.902	Esox_lucius
ENSFHEG00000022133	ddb1	98	90.670	ENSFCAG00000029716	DDB1	90	90.588	Felis_catus
ENSFHEG00000022133	ddb1	99	90.698	ENSFALG00000011981	DDB1	90	90.698	Ficedula_albicollis
ENSFHEG00000022133	ddb1	98	91.373	ENSFDAG00000005128	DDB1	90	91.373	Fukomys_damarensis
ENSFHEG00000022133	ddb1	77	97.659	ENSGMOG00000019386	ddb1	82	97.659	Gadus_morhua
ENSFHEG00000022133	ddb1	99	91.765	ENSGALG00000042333	DDB1	90	91.765	Gallus_gallus
ENSFHEG00000022133	ddb1	93	98.913	ENSGAFG00000013142	ddb1	89	98.913	Gambusia_affinis
ENSFHEG00000022133	ddb1	95	96.000	ENSGACG00000017182	ddb1	90	96.000	Gasterosteus_aculeatus
ENSFHEG00000022133	ddb1	93	91.765	ENSGAGG00000014124	DDB1	90	91.765	Gopherus_agassizii
ENSFHEG00000022133	ddb1	98	92.400	ENSGGOG00000004052	DDB1	90	92.400	Gorilla_gorilla
ENSFHEG00000022133	ddb1	99	96.774	ENSHBUG00000008873	ddb1	90	96.774	Haplochromis_burtoni
ENSFHEG00000022133	ddb1	98	92.800	ENSHGLG00000018430	DDB1	90	92.800	Heterocephalus_glaber_female
ENSFHEG00000022133	ddb1	98	92.800	ENSHGLG00100014475	DDB1	90	92.800	Heterocephalus_glaber_male
ENSFHEG00000022133	ddb1	93	97.826	ENSHCOG00000018670	ddb1	88	97.826	Hippocampus_comes
ENSFHEG00000022133	ddb1	99	95.686	ENSIPUG00000005612	DDB1	90	95.686	Ictalurus_punctatus
ENSFHEG00000022133	ddb1	98	90.588	ENSSTOG00000007552	DDB1	90	90.588	Ictidomys_tridecemlineatus
ENSFHEG00000022133	ddb1	98	90.670	ENSJJAG00000017769	Ddb1	90	89.804	Jaculus_jaculus
ENSFHEG00000022133	ddb1	93	98.370	ENSKMAG00000002315	ddb1	89	98.370	Kryptolebias_marmoratus
ENSFHEG00000022133	ddb1	83	98.947	ENSLBEG00000017065	ddb1	88	98.947	Labrus_bergylta
ENSFHEG00000022133	ddb1	99	90.272	ENSLACG00000017611	DDB1	90	90.272	Latimeria_chalumnae
ENSFHEG00000022133	ddb1	91	93.798	ENSLOCG00000000012	ddb1	89	93.798	Lepisosteus_oculatus
ENSFHEG00000022133	ddb1	98	90.588	ENSLAFG00000011513	DDB1	90	90.588	Loxodonta_africana
ENSFHEG00000022133	ddb1	98	92.400	ENSMFAG00000042035	DDB1	90	92.400	Macaca_fascicularis
ENSFHEG00000022133	ddb1	97	90.650	ENSMMUG00000002691	DDB1	90	90.650	Macaca_mulatta
ENSFHEG00000022133	ddb1	98	92.400	ENSMNEG00000031559	DDB1	90	92.400	Macaca_nemestrina
ENSFHEG00000022133	ddb1	98	92.400	ENSMLEG00000044136	DDB1	88	95.109	Mandrillus_leucophaeus
ENSFHEG00000022133	ddb1	99	96.903	ENSMAMG00000014372	ddb1	90	96.903	Mastacembelus_armatus
ENSFHEG00000022133	ddb1	99	96.774	ENSMZEG00005013835	ddb1	90	96.774	Maylandia_zebra
ENSFHEG00000022133	ddb1	93	90.698	ENSMGAG00000004990	DDB1	91	90.698	Meleagris_gallopavo
ENSFHEG00000022133	ddb1	98	90.670	ENSMAUG00000012926	Ddb1	90	90.588	Mesocricetus_auratus
ENSFHEG00000022133	ddb1	98	90.802	ENSMICG00000013703	DDB1	90	90.588	Microcebus_murinus
ENSFHEG00000022133	ddb1	98	90.588	ENSMOCG00000020499	Ddb1	90	90.588	Microtus_ochrogaster
ENSFHEG00000022133	ddb1	84	97.895	ENSMMOG00000001758	ddb1	89	97.895	Mola_mola
ENSFHEG00000022133	ddb1	98	86.194	ENSMODG00000020353	DDB1	90	86.194	Monodelphis_domestica
ENSFHEG00000022133	ddb1	99	96.645	ENSMALG00000014071	ddb1	90	96.645	Monopterus_albus
ENSFHEG00000022133	ddb1	98	90.670	MGP_CAROLIEiJ_G0022695	Ddb1	90	90.588	Mus_caroli
ENSFHEG00000022133	ddb1	98	90.802	ENSMUSG00000024740	Ddb1	90	90.588	Mus_musculus
ENSFHEG00000022133	ddb1	98	90.670	MGP_PahariEiJ_G0014189	Ddb1	90	90.588	Mus_pahari
ENSFHEG00000022133	ddb1	98	90.802	MGP_SPRETEiJ_G0023609	Ddb1	90	90.588	Mus_spretus
ENSFHEG00000022133	ddb1	98	89.619	ENSMPUG00000014200	DDB1	90	88.516	Mustela_putorius_furo
ENSFHEG00000022133	ddb1	98	90.980	ENSMLUG00000013232	DDB1	90	90.980	Myotis_lucifugus
ENSFHEG00000022133	ddb1	99	90.588	ENSNGAG00000009384	Ddb1	90	90.588	Nannospalax_galili
ENSFHEG00000022133	ddb1	99	96.774	ENSNBRG00000019581	ddb1	90	96.774	Neolamprologus_brichardi
ENSFHEG00000022133	ddb1	98	92.400	ENSNLEG00000002022	DDB1	90	92.400	Nomascus_leucogenys
ENSFHEG00000022133	ddb1	96	90.980	ENSMEUG00000001099	DDB1	90	90.980	Notamacropus_eugenii
ENSFHEG00000022133	ddb1	88	89.110	ENSOPRG00000008254	DDB1	81	87.838	Ochotona_princeps
ENSFHEG00000022133	ddb1	98	90.980	ENSODEG00000002419	DDB1	90	90.980	Octodon_degus
ENSFHEG00000022133	ddb1	99	96.903	ENSONIG00000005804	ddb1	90	96.903	Oreochromis_niloticus
ENSFHEG00000022133	ddb1	88	92.157	ENSOANG00000004897	DDB1	89	92.157	Ornithorhynchus_anatinus
ENSFHEG00000022133	ddb1	98	90.670	ENSOCUG00000001667	DDB1	90	90.588	Oryctolagus_cuniculus
ENSFHEG00000022133	ddb1	95	95.613	ENSORLG00000001399	ddb1	88	97.436	Oryzias_latipes
ENSFHEG00000022133	ddb1	93	97.826	ENSORLG00020001277	ddb1	85	97.826	Oryzias_latipes_hni
ENSFHEG00000022133	ddb1	93	97.826	ENSORLG00015002080	ddb1	88	97.826	Oryzias_latipes_hsok
ENSFHEG00000022133	ddb1	93	97.826	ENSOMEG00000006181	ddb1	87	97.826	Oryzias_melastigma
ENSFHEG00000022133	ddb1	98	90.802	ENSOGAG00000016103	DDB1	90	90.588	Otolemur_garnettii
ENSFHEG00000022133	ddb1	97	91.597	ENSOARG00000011716	DDB1	88	91.597	Ovis_aries
ENSFHEG00000022133	ddb1	98	92.400	ENSPPAG00000035343	DDB1	90	92.400	Pan_paniscus
ENSFHEG00000022133	ddb1	98	90.670	ENSPPRG00000013300	DDB1	90	90.588	Panthera_pardus
ENSFHEG00000022133	ddb1	96	90.676	ENSPTIG00000006909	DDB1	89	90.588	Panthera_tigris_altaica
ENSFHEG00000022133	ddb1	98	92.400	ENSPTRG00000003737	DDB1	90	92.400	Pan_troglodytes
ENSFHEG00000022133	ddb1	98	92.400	ENSPANG00000000242	DDB1	90	92.400	Papio_anubis
ENSFHEG00000022133	ddb1	93	97.283	ENSPKIG00000019213	ddb1	84	97.283	Paramormyrops_kingsleyae
ENSFHEG00000022133	ddb1	96	91.765	ENSPSIG00000013275	DDB1	90	91.765	Pelodiscus_sinensis
ENSFHEG00000022133	ddb1	84	98.947	ENSPMGG00000021179	ddb1	89	98.947	Periophthalmus_magnuspinnatus
ENSFHEG00000022133	ddb1	98	90.670	ENSPEMG00000012241	Ddb1	90	90.588	Peromyscus_maniculatus_bairdii
ENSFHEG00000022133	ddb1	88	92.810	ENSPMAG00000008479	ddb1	89	92.810	Petromyzon_marinus
ENSFHEG00000022133	ddb1	98	90.670	ENSPCIG00000002643	DDB1	90	90.588	Phascolarctos_cinereus
ENSFHEG00000022133	ddb1	99	97.419	ENSPFOG00000002768	ddb1	90	97.419	Poecilia_formosa
ENSFHEG00000022133	ddb1	99	97.419	ENSPLAG00000017227	ddb1	90	97.419	Poecilia_latipinna
ENSFHEG00000022133	ddb1	99	97.419	ENSPMEG00000011398	ddb1	90	97.419	Poecilia_mexicana
ENSFHEG00000022133	ddb1	93	98.913	ENSPREG00000004440	ddb1	97	92.702	Poecilia_reticulata
ENSFHEG00000022133	ddb1	99	88.031	ENSPPYG00000003193	DDB1	90	88.031	Pongo_abelii
ENSFHEG00000022133	ddb1	81	90.196	ENSPCAG00000011040	DDB1	76	90.196	Procavia_capensis
ENSFHEG00000022133	ddb1	98	89.908	ENSPCOG00000015176	DDB1	90	89.020	Propithecus_coquereli
ENSFHEG00000022133	ddb1	98	90.588	ENSPVAG00000003847	DDB1	90	90.588	Pteropus_vampyrus
ENSFHEG00000022133	ddb1	93	97.826	ENSPNAG00000006635	ddb1	87	97.826	Pygocentrus_nattereri
ENSFHEG00000022133	ddb1	98	90.802	ENSRNOG00000020715	Ddb1	90	90.588	Rattus_norvegicus
ENSFHEG00000022133	ddb1	98	90.588	ENSRBIG00000033611	DDB1	90	90.650	Rhinopithecus_bieti
ENSFHEG00000022133	ddb1	98	92.400	ENSRROG00000041407	DDB1	90	92.400	Rhinopithecus_roxellana
ENSFHEG00000022133	ddb1	98	90.980	ENSSBOG00000019775	DDB1	90	90.980	Saimiri_boliviensis_boliviensis
ENSFHEG00000022133	ddb1	91	90.980	ENSSHAG00000011600	DDB1	91	90.980	Sarcophilus_harrisii
ENSFHEG00000022133	ddb1	93	97.283	ENSSFOG00015011151	ddb1	86	97.283	Scleropages_formosus
ENSFHEG00000022133	ddb1	99	96.471	ENSSMAG00000009495	ddb1	90	96.471	Scophthalmus_maximus
ENSFHEG00000022133	ddb1	99	96.903	ENSSDUG00000004642	ddb1	90	96.903	Seriola_dumerili
ENSFHEG00000022133	ddb1	99	96.903	ENSSLDG00000015804	ddb1	90	96.903	Seriola_lalandi_dorsalis
ENSFHEG00000022133	ddb1	73	92.453	ENSSARG00000003290	-	70	92.453	Sorex_araneus
ENSFHEG00000022133	ddb1	98	91.765	ENSSPUG00000019338	DDB1	90	91.765	Sphenodon_punctatus
ENSFHEG00000022133	ddb1	93	98.370	ENSSPAG00000009888	ddb1	88	98.947	Stegastes_partitus
ENSFHEG00000022133	ddb1	98	90.539	ENSSSCG00000013094	DDB1	90	90.400	Sus_scrofa
ENSFHEG00000022133	ddb1	99	90.196	ENSTGUG00000006414	DDB1	90	90.196	Taeniopygia_guttata
ENSFHEG00000022133	ddb1	94	95.652	ENSTRUG00000016682	ddb1	90	97.895	Takifugu_rubripes
ENSFHEG00000022133	ddb1	86	93.066	ENSTNIG00000009565	ddb1	92	93.066	Tetraodon_nigroviridis
ENSFHEG00000022133	ddb1	89	90.945	ENSTTRG00000011055	DDB1	83	90.945	Tursiops_truncatus
ENSFHEG00000022133	ddb1	92	95.109	ENSUAMG00000017793	DDB1	83	95.109	Ursus_americanus
ENSFHEG00000022133	ddb1	92	95.109	ENSUMAG00000011788	DDB1	87	95.109	Ursus_maritimus
ENSFHEG00000022133	ddb1	87	98.246	ENSVPAG00000007963	DDB1	82	98.246	Vicugna_pacos
ENSFHEG00000022133	ddb1	98	90.670	ENSVVUG00000004987	DDB1	91	90.588	Vulpes_vulpes
ENSFHEG00000022133	ddb1	99	89.535	ENSXETG00000008820	ddb1	90	89.535	Xenopus_tropicalis
ENSFHEG00000022133	ddb1	84	98.947	ENSXCOG00000013956	ddb1	89	98.947	Xiphophorus_couchianus
ENSFHEG00000022133	ddb1	93	98.913	ENSXMAG00000000022	ddb1	89	98.913	Xiphophorus_maculatus