EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000022176 (Gene tree)
Gene ID: 105933106
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein Rab-1B
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 8213 bases
Position: chrKN811400.1:95031-103243
Accession: 105933106
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000020238	MMR_HSR1	PF01926.23	4.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000029692	-	3396	XM_012872492	ENSFHEP00000020238	214 (aa)	XP_012727946	A0A146ZYF8

Gene Model

Click here to download ENSFHEG00000022176's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000022176	zgc:171927	99	46.445	ENSFHEG00000013918	rab30	97	46.445
ENSFHEG00000022176	zgc:171927	79	45.029	ENSFHEG00000020877	RAB39B	80	45.029
ENSFHEG00000022176	zgc:171927	79	44.444	ENSFHEG00000002885	-	80	44.444
ENSFHEG00000022176	zgc:171927	80	46.512	ENSFHEG00000004319	rab12	70	46.512
ENSFHEG00000022176	zgc:171927	82	44.886	ENSFHEG00000014070	rab5aa	81	44.886
ENSFHEG00000022176	zgc:171927	67	30.345	ENSFHEG00000018216	-	66	30.345
ENSFHEG00000022176	zgc:171927	79	52.976	ENSFHEG00000022642	rab11ba	77	52.976
ENSFHEG00000022176	zgc:171927	81	37.931	ENSFHEG00000012702	rab22a	90	37.931
ENSFHEG00000022176	zgc:171927	80	47.674	ENSFHEG00000003018	rab25b	83	47.674
ENSFHEG00000022176	zgc:171927	82	42.045	ENSFHEG00000015268	-	80	42.045
ENSFHEG00000022176	zgc:171927	77	37.870	ENSFHEG00000007101	RAB7A	82	37.870
ENSFHEG00000022176	zgc:171927	82	45.055	ENSFHEG00000011483	zgc:101559	78	45.055
ENSFHEG00000022176	zgc:171927	79	49.112	ENSFHEG00000001296	rab2a	80	49.112
ENSFHEG00000022176	zgc:171927	79	64.286	ENSFHEG00000004891	rab35b	92	64.286
ENSFHEG00000022176	zgc:171927	85	47.619	ENSFHEG00000020035	rab18b	92	47.619
ENSFHEG00000022176	zgc:171927	74	39.130	ENSFHEG00000006551	rab36	60	39.130
ENSFHEG00000022176	zgc:171927	74	39.506	ENSFHEG00000004532	rab34b	63	39.506
ENSFHEG00000022176	zgc:171927	90	54.124	ENSFHEG00000021221	rab13	94	58.140
ENSFHEG00000022176	zgc:171927	99	44.550	ENSFHEG00000018353	rab11bb	96	44.550
ENSFHEG00000022176	zgc:171927	79	43.275	ENSFHEG00000013106	rab42a	78	43.275
ENSFHEG00000022176	zgc:171927	82	46.286	ENSFHEG00000010509	rab4a	82	46.286
ENSFHEG00000022176	zgc:171927	80	40.571	ENSFHEG00000012041	si:dkey-34d22.5	78	40.571
ENSFHEG00000022176	zgc:171927	96	34.135	ENSFHEG00000022524	rab6bb	94	34.135
ENSFHEG00000022176	zgc:171927	85	51.381	ENSFHEG00000019668	rab11a	84	51.381
ENSFHEG00000022176	zgc:171927	81	32.000	ENSFHEG00000003799	rheb	90	32.000
ENSFHEG00000022176	zgc:171927	79	35.838	ENSFHEG00000018764	RAB9A	79	35.838
ENSFHEG00000022176	zgc:171927	93	40.488	ENSFHEG00000000695	-	95	40.488
ENSFHEG00000022176	zgc:171927	93	75.879	ENSFHEG00000014414	-	96	75.879
ENSFHEG00000022176	zgc:171927	84	36.066	ENSFHEG00000005588	RAB7A	81	36.066
ENSFHEG00000022176	zgc:171927	100	70.968	ENSFHEG00000022985	rab1ab	100	70.968
ENSFHEG00000022176	zgc:171927	85	32.663	ENSFHEG00000019684	rasl11a	76	32.663
ENSFHEG00000022176	zgc:171927	73	33.540	ENSFHEG00000015993	RAB29	79	33.540
ENSFHEG00000022176	zgc:171927	75	39.130	ENSFHEG00000015996	RAB41	76	39.130
ENSFHEG00000022176	zgc:171927	64	46.324	ENSFHEG00000018450	RAB14	69	46.324
ENSFHEG00000022176	zgc:171927	96	34.597	ENSFHEG00000013691	rab34a	79	34.597
ENSFHEG00000022176	zgc:171927	85	31.694	ENSFHEG00000008212	rhebl1	95	31.694
ENSFHEG00000022176	zgc:171927	79	36.416	ENSFHEG00000021111	rab9a	84	36.416
ENSFHEG00000022176	zgc:171927	55	30.252	ENSFHEG00000009894	arl4cb	60	30.252
ENSFHEG00000022176	zgc:171927	77	35.928	ENSFHEG00000004875	si:ch73-116o1.2	80	35.928
ENSFHEG00000022176	zgc:171927	55	30.833	ENSFHEG00000009487	arl4aa	59	30.833
ENSFHEG00000022176	zgc:171927	55	30.508	ENSFHEG00000020247	arl8ba	61	30.508
ENSFHEG00000022176	zgc:171927	76	48.466	ENSFHEG00000014087	RAB15	78	48.466
ENSFHEG00000022176	zgc:171927	73	35.849	ENSFHEG00000015015	rabl2	58	35.849
ENSFHEG00000022176	zgc:171927	75	51.852	ENSFHEG00000019455	rab18a	79	51.852
ENSFHEG00000022176	zgc:171927	99	44.550	ENSFHEG00000022676	-	96	44.550
ENSFHEG00000022176	zgc:171927	79	50.296	ENSFHEG00000009378	rab15	79	50.296
ENSFHEG00000022176	zgc:171927	73	37.179	ENSFHEG00000023069	rab23	74	35.227
ENSFHEG00000022176	zgc:171927	75	38.509	ENSFHEG00000001477	-	64	38.509
ENSFHEG00000022176	zgc:171927	98	41.706	ENSFHEG00000014186	rab25a	96	41.706
ENSFHEG00000022176	zgc:171927	79	41.758	ENSFHEG00000006820	rab33ba	76	41.758
ENSFHEG00000022176	zgc:171927	55	30.508	ENSFHEG00000019579	arl8bb	55	30.508
ENSFHEG00000022176	zgc:171927	100	70.561	ENSFHEG00000014924	rab1ba	100	70.561
ENSFHEG00000022176	zgc:171927	76	44.172	ENSFHEG00000012117	rab5c	89	40.291
ENSFHEG00000022176	zgc:171927	55	69.492	ENSFHEG00000000767	si:dkey-16l2.16	75	69.492
ENSFHEG00000022176	zgc:171927	77	37.576	ENSFHEG00000009108	kras	95	36.111
ENSFHEG00000022176	zgc:171927	76	42.515	ENSFHEG00000022141	rab33a	70	42.515
ENSFHEG00000022176	zgc:171927	55	31.092	ENSFHEG00000005294	arl2	66	31.405
ENSFHEG00000022176	zgc:171927	76	36.585	ENSFHEG00000010055	hrasb	86	36.585
ENSFHEG00000022176	zgc:171927	85	49.724	ENSFHEG00000000832	rab11al	87	49.724
ENSFHEG00000022176	zgc:171927	74	37.037	ENSFHEG00000002502	si:dkey-13a21.4	79	37.037
ENSFHEG00000022176	zgc:171927	72	38.365	ENSFHEG00000009417	rab9b	72	38.365
ENSFHEG00000022176	zgc:171927	88	33.161	ENSFHEG00000016504	si:cabz01085950.1	92	33.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022176	zgc:171927	100	93.925	ENSAPOG00000004980	-	100	93.925	Acanthochromis_polyacanthus
ENSFHEG00000022176	zgc:171927	100	93.925	ENSACIG00000009006	zgc:171927	100	93.925	Amphilophus_citrinellus
ENSFHEG00000022176	zgc:171927	100	91.589	ENSAOCG00000024149	-	100	91.589	Amphiprion_ocellaris
ENSFHEG00000022176	zgc:171927	71	88.387	ENSAOCG00000013808	-	93	96.694	Amphiprion_ocellaris
ENSFHEG00000022176	zgc:171927	100	92.056	ENSAPEG00000022171	zgc:171927	99	92.056	Amphiprion_percula
ENSFHEG00000022176	zgc:171927	100	92.991	ENSATEG00000003430	zgc:171927	100	92.991	Anabas_testudineus
ENSFHEG00000022176	zgc:171927	100	92.991	ENSACLG00000013734	-	100	92.991	Astatotilapia_calliptera
ENSFHEG00000022176	zgc:171927	100	78.605	ENSAMXG00000039486	zgc:171927	100	78.605	Astyanax_mexicanus
ENSFHEG00000022176	zgc:171927	100	91.121	ENSCSEG00000014416	zgc:171927	100	91.121	Cynoglossus_semilaevis
ENSFHEG00000022176	zgc:171927	100	95.794	ENSCVAG00000009222	zgc:171927	100	95.794	Cyprinodon_variegatus
ENSFHEG00000022176	zgc:171927	100	77.674	ENSDARG00000033056	zgc:171927	100	77.674	Danio_rerio
ENSFHEG00000022176	zgc:171927	94	81.683	ENSELUG00000011680	zgc:171927	99	78.605	Esox_lucius
ENSFHEG00000022176	zgc:171927	98	81.991	ENSGMOG00000004979	-	97	81.991	Gadus_morhua
ENSFHEG00000022176	zgc:171927	98	93.780	ENSGAFG00000015702	zgc:171927	84	93.780	Gambusia_affinis
ENSFHEG00000022176	zgc:171927	100	91.589	ENSGACG00000013401	zgc:171927	99	91.589	Gasterosteus_aculeatus
ENSFHEG00000022176	zgc:171927	100	92.991	ENSHBUG00000002397	-	100	92.991	Haplochromis_burtoni
ENSFHEG00000022176	zgc:171927	100	93.925	ENSKMAG00000009856	zgc:171927	100	93.925	Kryptolebias_marmoratus
ENSFHEG00000022176	zgc:171927	98	88.995	ENSLBEG00000027226	-	89	88.995	Labrus_bergylta
ENSFHEG00000022176	zgc:171927	100	89.720	ENSLBEG00000005791	-	100	89.720	Labrus_bergylta
ENSFHEG00000022176	zgc:171927	98	71.429	ENSLOCG00000014692	zgc:171927	96	71.429	Lepisosteus_oculatus
ENSFHEG00000022176	zgc:171927	100	90.654	ENSMAMG00000020135	zgc:171927	100	90.654	Mastacembelus_armatus
ENSFHEG00000022176	zgc:171927	100	92.991	ENSMZEG00005024685	-	100	92.991	Maylandia_zebra
ENSFHEG00000022176	zgc:171927	100	88.785	ENSMMOG00000009833	-	100	88.785	Mola_mola
ENSFHEG00000022176	zgc:171927	100	89.252	ENSMALG00000021129	zgc:171927	100	89.252	Monopterus_albus
ENSFHEG00000022176	zgc:171927	100	92.523	ENSNBRG00000006202	zgc:171927	100	92.523	Neolamprologus_brichardi
ENSFHEG00000022176	zgc:171927	100	91.121	ENSORLG00000000602	zgc:171927	100	91.121	Oryzias_latipes
ENSFHEG00000022176	zgc:171927	100	91.121	ENSORLG00020021071	zgc:171927	100	91.121	Oryzias_latipes_hni
ENSFHEG00000022176	zgc:171927	100	91.121	ENSORLG00015010098	zgc:171927	100	91.121	Oryzias_latipes_hsok
ENSFHEG00000022176	zgc:171927	100	92.523	ENSOMEG00000020594	zgc:171927	100	92.523	Oryzias_melastigma
ENSFHEG00000022176	zgc:171927	100	93.925	ENSPFOG00000013810	zgc:171927	99	93.925	Poecilia_formosa
ENSFHEG00000022176	zgc:171927	100	92.991	ENSPLAG00000005869	zgc:171927	100	92.991	Poecilia_latipinna
ENSFHEG00000022176	zgc:171927	100	93.925	ENSPMEG00000022350	zgc:171927	100	93.925	Poecilia_mexicana
ENSFHEG00000022176	zgc:171927	100	94.860	ENSPREG00000017517	zgc:171927	100	94.860	Poecilia_reticulata
ENSFHEG00000022176	zgc:171927	100	92.991	ENSPNYG00000007520	-	100	92.991	Pundamilia_nyererei
ENSFHEG00000022176	zgc:171927	100	78.605	ENSPNAG00000029574	zgc:171927	100	78.605	Pygocentrus_nattereri
ENSFHEG00000022176	zgc:171927	100	77.674	ENSSFOG00015005464	zgc:171927	99	77.674	Scleropages_formosus
ENSFHEG00000022176	zgc:171927	100	89.720	ENSSMAG00000004416	-	100	89.720	Scophthalmus_maximus
ENSFHEG00000022176	zgc:171927	100	93.925	ENSSDUG00000004445	zgc:171927	100	93.925	Seriola_dumerili
ENSFHEG00000022176	zgc:171927	100	93.925	ENSSLDG00000018024	zgc:171927	100	93.925	Seriola_lalandi_dorsalis
ENSFHEG00000022176	zgc:171927	100	92.991	ENSSPAG00000013533	zgc:171927	100	92.991	Stegastes_partitus
ENSFHEG00000022176	zgc:171927	100	95.327	ENSXCOG00000010695	zgc:171927	100	95.327	Xiphophorus_couchianus
ENSFHEG00000022176	zgc:171927	100	95.327	ENSXMAG00000004683	zgc:171927	100	95.327	Xiphophorus_maculatus