EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000022262 (Gene tree)
Gene ID: 105932460
Gene Symbol: si:ch73-63e15.2
Alias: si:dkey-19f23.4
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 75272 bases
Position: chrKN811389.1:417139-492410
Accession: 105932460
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000034499	ResIII	PF04851.15	4.4e-08	1	1
ENSFHEP00000020332	ResIII	PF04851.15	4.7e-08	1	1
ENSFHEP00000034512	ResIII	PF04851.15	5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000029844	-	9282	XM_012871642	ENSFHEP00000034512	1593 (aa)	XP_012727096	UPI000644C2B7
ENSFHET00000029786	-	9167	XM_012871646	ENSFHEP00000034499	1507 (aa)	XP_012727100	UPI0006451860
ENSFHET00000035156	-	9201	XM_012871645	ENSFHEP00000020332	1566 (aa)	XP_012727099	UPI0006449FE0

Gene Model

Click here to download ENSFHEG00000022262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000022262	si:ch73-63e15.2	65	64.626	ENSFHEG00000007360	sbno1	77	57.955

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022262	si:ch73-63e15.2	76	67.521	ENSG00000064932	SBNO2	88	68.061	Homo_sapiens
ENSFHEG00000022262	si:ch73-63e15.2	88	84.081	ENSAPOG00000003185	si:ch73-63e15.2	100	80.074	Acanthochromis_polyacanthus
ENSFHEG00000022262	si:ch73-63e15.2	63	89.331	ENSAOCG00000016581	si:ch73-63e15.2	94	88.703	Amphiprion_ocellaris
ENSFHEG00000022262	si:ch73-63e15.2	88	83.804	ENSATEG00000023838	si:ch73-63e15.2	99	84.721	Anabas_testudineus
ENSFHEG00000022262	si:ch73-63e15.2	75	71.651	ENSAPLG00000007158	SBNO2	89	71.737	Anas_platyrhynchos
ENSFHEG00000022262	si:ch73-63e15.2	76	67.038	ENSANAG00000026685	SBNO2	89	67.322	Aotus_nancymaae
ENSFHEG00000022262	si:ch73-63e15.2	100	77.150	ENSACLG00000005090	si:ch73-63e15.2	100	77.150	Astatotilapia_calliptera
ENSFHEG00000022262	si:ch73-63e15.2	88	74.773	ENSAMXG00000015881	si:ch73-63e15.2	85	80.239	Astyanax_mexicanus
ENSFHEG00000022262	si:ch73-63e15.2	78	78.415	ENSAMXG00000018868	sbno2a	99	78.427	Astyanax_mexicanus
ENSFHEG00000022262	si:ch73-63e15.2	76	68.412	ENSBTAG00000020780	SBNO2	88	68.291	Bos_taurus
ENSFHEG00000022262	si:ch73-63e15.2	75	69.211	ENSCAFG00000019543	SBNO2	90	66.083	Canis_familiaris
ENSFHEG00000022262	si:ch73-63e15.2	75	69.211	ENSCAFG00020017115	SBNO2	95	66.083	Canis_lupus_dingo
ENSFHEG00000022262	si:ch73-63e15.2	75	68.604	ENSCHIG00000026127	SBNO2	90	65.287	Capra_hircus
ENSFHEG00000022262	si:ch73-63e15.2	75	66.783	ENSCAPG00000005731	SBNO2	94	66.696	Cavia_aperea
ENSFHEG00000022262	si:ch73-63e15.2	75	66.320	ENSCPOG00000007477	SBNO2	86	66.928	Cavia_porcellus
ENSFHEG00000022262	si:ch73-63e15.2	76	66.895	ENSCCAG00000037518	SBNO2	89	67.436	Cebus_capucinus
ENSFHEG00000022262	si:ch73-63e15.2	76	67.805	ENSCATG00000037046	SBNO2	88	68.061	Cercocebus_atys
ENSFHEG00000022262	si:ch73-63e15.2	76	67.811	ENSCLAG00000010178	SBNO2	99	68.352	Chinchilla_lanigera
ENSFHEG00000022262	si:ch73-63e15.2	74	68.783	ENSCSAG00000012317	SBNO2	90	64.936	Chlorocebus_sabaeus
ENSFHEG00000022262	si:ch73-63e15.2	79	67.635	ENSCPBG00000008920	SBNO2	95	67.313	Chrysemys_picta_bellii
ENSFHEG00000022262	si:ch73-63e15.2	73	67.558	ENSCANG00000036745	SBNO2	96	67.825	Colobus_angolensis_palliatus
ENSFHEG00000022262	si:ch73-63e15.2	75	66.493	ENSCGRG00001023960	Sbno2	85	66.783	Cricetulus_griseus_chok1gshd
ENSFHEG00000022262	si:ch73-63e15.2	75	67.823	ENSCGRG00000011984	Sbno2	85	68.118	Cricetulus_griseus_crigri
ENSFHEG00000022262	si:ch73-63e15.2	77	85.034	ENSCSEG00000006856	si:ch73-63e15.2	97	87.809	Cynoglossus_semilaevis
ENSFHEG00000022262	si:ch73-63e15.2	100	84.756	ENSCVAG00000005663	si:ch73-63e15.2	100	84.810	Cyprinodon_variegatus
ENSFHEG00000022262	si:ch73-63e15.2	99	67.523	ENSDARG00000016188	SBNO2	86	78.210	Danio_rerio
ENSFHEG00000022262	si:ch73-63e15.2	78	77.460	ENSDARG00000098801	sbno2a	94	74.003	Danio_rerio
ENSFHEG00000022262	si:ch73-63e15.2	75	68.115	ENSDORG00000002916	Sbno2	88	66.501	Dipodomys_ordii
ENSFHEG00000022262	si:ch73-63e15.2	76	68.664	ENSEASG00005021621	SBNO2	89	68.777	Equus_asinus_asinus
ENSFHEG00000022262	si:ch73-63e15.2	76	68.408	ENSECAG00000011827	SBNO2	89	68.457	Equus_caballus
ENSFHEG00000022262	si:ch73-63e15.2	99	71.663	ENSELUG00000020457	si:ch73-63e15.2	99	71.087	Esox_lucius
ENSFHEG00000022262	si:ch73-63e15.2	76	71.123	ENSFALG00000013988	SBNO2	86	70.613	Ficedula_albicollis
ENSFHEG00000022262	si:ch73-63e15.2	72	66.938	ENSFDAG00000015186	SBNO2	88	65.923	Fukomys_damarensis
ENSFHEG00000022262	si:ch73-63e15.2	79	82.421	ENSGMOG00000007542	si:ch73-63e15.2	100	82.007	Gadus_morhua
ENSFHEG00000022262	si:ch73-63e15.2	79	69.212	ENSGALG00000037522	SBNO2	88	69.212	Gallus_gallus
ENSFHEG00000022262	si:ch73-63e15.2	79	94.347	ENSGAFG00000004860	si:ch73-63e15.2	93	94.530	Gambusia_affinis
ENSFHEG00000022262	si:ch73-63e15.2	76	87.803	ENSGACG00000013190	si:ch73-63e15.2	96	87.144	Gasterosteus_aculeatus
ENSFHEG00000022262	si:ch73-63e15.2	85	66.566	ENSGAGG00000008348	SBNO2	90	70.115	Gopherus_agassizii
ENSFHEG00000022262	si:ch73-63e15.2	100	77.087	ENSHBUG00000010742	si:ch73-63e15.2	100	77.497	Haplochromis_burtoni
ENSFHEG00000022262	si:ch73-63e15.2	75	68.348	ENSHGLG00000008739	SBNO2	86	67.627	Heterocephalus_glaber_female
ENSFHEG00000022262	si:ch73-63e15.2	76	67.720	ENSHGLG00100005269	SBNO2	99	68.257	Heterocephalus_glaber_male
ENSFHEG00000022262	si:ch73-63e15.2	78	84.648	ENSHCOG00000000884	si:ch73-63e15.2	95	82.157	Hippocampus_comes
ENSFHEG00000022262	si:ch73-63e15.2	78	78.898	ENSIPUG00000000537	si:ch73-63e15.2	93	74.804	Ictalurus_punctatus
ENSFHEG00000022262	si:ch73-63e15.2	79	77.920	ENSIPUG00000019672	sbno2	99	77.005	Ictalurus_punctatus
ENSFHEG00000022262	si:ch73-63e15.2	75	67.854	ENSSTOG00000025832	SBNO2	86	67.747	Ictidomys_tridecemlineatus
ENSFHEG00000022262	si:ch73-63e15.2	75	65.425	ENSJJAG00000017397	Sbno2	89	64.221	Jaculus_jaculus
ENSFHEG00000022262	si:ch73-63e15.2	100	80.679	ENSKMAG00000005541	si:ch73-63e15.2	100	79.560	Kryptolebias_marmoratus
ENSFHEG00000022262	si:ch73-63e15.2	100	76.962	ENSLBEG00000025016	si:ch73-63e15.2	99	88.490	Labrus_bergylta
ENSFHEG00000022262	si:ch73-63e15.2	76	83.767	ENSLOCG00000004643	si:ch73-63e15.2	85	83.608	Lepisosteus_oculatus
ENSFHEG00000022262	si:ch73-63e15.2	74	64.991	ENSLAFG00000008824	SBNO2	89	65.061	Loxodonta_africana
ENSFHEG00000022262	si:ch73-63e15.2	76	66.297	ENSMFAG00000040030	SBNO2	90	66.553	Macaca_fascicularis
ENSFHEG00000022262	si:ch73-63e15.2	74	68.783	ENSMMUG00000010886	SBNO2	90	64.936	Macaca_mulatta
ENSFHEG00000022262	si:ch73-63e15.2	76	67.891	ENSMNEG00000039927	SBNO2	88	68.147	Macaca_nemestrina
ENSFHEG00000022262	si:ch73-63e15.2	68	69.349	ENSMLEG00000038556	SBNO2	92	68.266	Mandrillus_leucophaeus
ENSFHEG00000022262	si:ch73-63e15.2	89	81.971	ENSMAMG00000018758	si:ch73-63e15.2	100	77.296	Mastacembelus_armatus
ENSFHEG00000022262	si:ch73-63e15.2	100	77.150	ENSMZEG00005010682	si:ch73-63e15.2	100	77.150	Maylandia_zebra
ENSFHEG00000022262	si:ch73-63e15.2	76	71.344	ENSMGAG00000003801	SBNO2	90	71.687	Meleagris_gallopavo
ENSFHEG00000022262	si:ch73-63e15.2	75	67.941	ENSMAUG00000008034	Sbno2	85	67.916	Mesocricetus_auratus
ENSFHEG00000022262	si:ch73-63e15.2	76	67.209	ENSMICG00000013071	SBNO2	88	68.111	Microcebus_murinus
ENSFHEG00000022262	si:ch73-63e15.2	75	67.969	ENSMOCG00000010504	Sbno2	85	68.206	Microtus_ochrogaster
ENSFHEG00000022262	si:ch73-63e15.2	76	70.180	ENSMODG00000005382	SBNO2	89	66.930	Monodelphis_domestica
ENSFHEG00000022262	si:ch73-63e15.2	62	82.253	ENSMALG00000021831	si:ch73-63e15.2	99	82.303	Monopterus_albus
ENSFHEG00000022262	si:ch73-63e15.2	75	67.767	ENSMUSG00000035673	Sbno2	93	68.352	Mus_musculus
ENSFHEG00000022262	si:ch73-63e15.2	75	67.767	MGP_PahariEiJ_G0030976	Sbno2	85	68.439	Mus_pahari
ENSFHEG00000022262	si:ch73-63e15.2	75	68.028	MGP_SPRETEiJ_G0016381	Sbno2	90	68.614	Mus_spretus
ENSFHEG00000022262	si:ch73-63e15.2	64	71.010	ENSMPUG00000008747	SBNO2	91	71.299	Mustela_putorius_furo
ENSFHEG00000022262	si:ch73-63e15.2	75	67.593	ENSNGAG00000004308	Sbno2	86	67.593	Nannospalax_galili
ENSFHEG00000022262	si:ch73-63e15.2	80	87.978	ENSNBRG00000022968	si:ch73-63e15.2	99	89.327	Neolamprologus_brichardi
ENSFHEG00000022262	si:ch73-63e15.2	72	69.504	ENSNLEG00000001305	SBNO2	89	69.504	Nomascus_leucogenys
ENSFHEG00000022262	si:ch73-63e15.2	61	66.490	ENSMEUG00000013511	-	78	66.490	Notamacropus_eugenii
ENSFHEG00000022262	si:ch73-63e15.2	73	67.972	ENSOPRG00000017238	SBNO2	94	68.222	Ochotona_princeps
ENSFHEG00000022262	si:ch73-63e15.2	75	67.652	ENSODEG00000011822	SBNO2	89	65.378	Octodon_degus
ENSFHEG00000022262	si:ch73-63e15.2	100	77.409	ENSONIG00000002490	si:ch73-63e15.2	95	86.527	Oreochromis_niloticus
ENSFHEG00000022262	si:ch73-63e15.2	100	76.804	ENSORLG00000000913	si:ch73-63e15.2	91	81.979	Oryzias_latipes
ENSFHEG00000022262	si:ch73-63e15.2	100	76.804	ENSORLG00020010978	si:ch73-63e15.2	88	82.500	Oryzias_latipes_hni
ENSFHEG00000022262	si:ch73-63e15.2	100	76.997	ENSORLG00015000202	si:ch73-63e15.2	92	82.500	Oryzias_latipes_hsok
ENSFHEG00000022262	si:ch73-63e15.2	88	80.832	ENSOMEG00000000359	si:ch73-63e15.2	100	75.000	Oryzias_melastigma
ENSFHEG00000022262	si:ch73-63e15.2	75	65.915	ENSOARG00000011130	SBNO2	93	62.659	Ovis_aries
ENSFHEG00000022262	si:ch73-63e15.2	76	66.780	ENSPPAG00000032482	SBNO2	90	67.062	Pan_paniscus
ENSFHEG00000022262	si:ch73-63e15.2	76	67.436	ENSPTRG00000010185	SBNO2	89	67.632	Pan_troglodytes
ENSFHEG00000022262	si:ch73-63e15.2	76	64.133	ENSPANG00000009658	SBNO2	88	64.646	Papio_anubis
ENSFHEG00000022262	si:ch73-63e15.2	67	78.613	ENSPKIG00000009707	-	85	77.355	Paramormyrops_kingsleyae
ENSFHEG00000022262	si:ch73-63e15.2	92	83.508	ENSPKIG00000024201	si:ch73-63e15.2	85	82.258	Paramormyrops_kingsleyae
ENSFHEG00000022262	si:ch73-63e15.2	64	73.124	ENSPSIG00000002852	SBNO2	99	73.225	Pelodiscus_sinensis
ENSFHEG00000022262	si:ch73-63e15.2	78	82.793	ENSPMGG00000014375	si:ch73-63e15.2	96	79.111	Periophthalmus_magnuspinnatus
ENSFHEG00000022262	si:ch73-63e15.2	75	66.638	ENSPEMG00000024122	Sbno2	85	66.843	Peromyscus_maniculatus_bairdii
ENSFHEG00000022262	si:ch73-63e15.2	75	70.139	ENSPCIG00000011264	SBNO2	85	69.282	Phascolarctos_cinereus
ENSFHEG00000022262	si:ch73-63e15.2	100	84.469	ENSPFOG00000004096	si:ch73-63e15.2	100	90.768	Poecilia_formosa
ENSFHEG00000022262	si:ch73-63e15.2	100	84.705	ENSPLAG00000014653	si:ch73-63e15.2	100	84.440	Poecilia_latipinna
ENSFHEG00000022262	si:ch73-63e15.2	100	84.852	ENSPMEG00000002129	si:ch73-63e15.2	96	88.390	Poecilia_mexicana
ENSFHEG00000022262	si:ch73-63e15.2	100	84.544	ENSPREG00000006755	si:ch73-63e15.2	100	84.106	Poecilia_reticulata
ENSFHEG00000022262	si:ch73-63e15.2	68	69.268	ENSPCAG00000012256	SBNO2	77	69.268	Procavia_capensis
ENSFHEG00000022262	si:ch73-63e15.2	76	61.689	ENSPCOG00000015216	SBNO2	88	62.084	Propithecus_coquereli
ENSFHEG00000022262	si:ch73-63e15.2	100	78.278	ENSPNYG00000019926	si:ch73-63e15.2	100	77.626	Pundamilia_nyererei
ENSFHEG00000022262	si:ch73-63e15.2	78	78.547	ENSPNAG00000026609	sbno2a	99	69.835	Pygocentrus_nattereri
ENSFHEG00000022262	si:ch73-63e15.2	88	75.227	ENSPNAG00000020260	si:ch73-63e15.2	85	81.586	Pygocentrus_nattereri
ENSFHEG00000022262	si:ch73-63e15.2	75	68.059	ENSRNOG00000013987	Sbno2	89	68.609	Rattus_norvegicus
ENSFHEG00000022262	si:ch73-63e15.2	70	66.113	ENSRBIG00000009740	SBNO2	87	66.389	Rhinopithecus_bieti
ENSFHEG00000022262	si:ch73-63e15.2	67	70.322	ENSRROG00000044671	SBNO2	86	70.322	Rhinopithecus_roxellana
ENSFHEG00000022262	si:ch73-63e15.2	76	67.066	ENSSBOG00000023562	SBNO2	89	67.607	Saimiri_boliviensis_boliviensis
ENSFHEG00000022262	si:ch73-63e15.2	75	70.757	ENSSHAG00000010241	SBNO2	98	70.757	Sarcophilus_harrisii
ENSFHEG00000022262	si:ch73-63e15.2	91	80.034	ENSSFOG00015005861	si:ch73-63e15.2	96	80.772	Scleropages_formosus
ENSFHEG00000022262	si:ch73-63e15.2	89	83.020	ENSSMAG00000012489	si:ch73-63e15.2	100	78.151	Scophthalmus_maximus
ENSFHEG00000022262	si:ch73-63e15.2	100	78.757	ENSSDUG00000003527	si:ch73-63e15.2	100	78.784	Seriola_dumerili
ENSFHEG00000022262	si:ch73-63e15.2	100	79.037	ENSSLDG00000004623	si:ch73-63e15.2	100	79.607	Seriola_lalandi_dorsalis
ENSFHEG00000022262	si:ch73-63e15.2	88	84.441	ENSSPAG00000017717	si:ch73-63e15.2	100	80.077	Stegastes_partitus
ENSFHEG00000022262	si:ch73-63e15.2	76	68.092	ENSSSCG00000030042	SBNO2	90	68.092	Sus_scrofa
ENSFHEG00000022262	si:ch73-63e15.2	74	86.898	ENSTRUG00000018193	si:ch73-63e15.2	86	87.934	Takifugu_rubripes
ENSFHEG00000022262	si:ch73-63e15.2	69	69.479	ENSUAMG00000006568	SBNO2	93	71.363	Ursus_americanus
ENSFHEG00000022262	si:ch73-63e15.2	75	69.124	ENSVVUG00000022823	SBNO2	89	66.003	Vulpes_vulpes
ENSFHEG00000022262	si:ch73-63e15.2	68	76.364	ENSXETG00000021579	sbno2	90	76.364	Xenopus_tropicalis
ENSFHEG00000022262	si:ch73-63e15.2	88	91.062	ENSXCOG00000009209	si:ch73-63e15.2	94	93.275	Xiphophorus_couchianus
ENSFHEG00000022262	si:ch73-63e15.2	100	85.561	ENSXMAG00000012091	si:ch73-63e15.2	100	85.139	Xiphophorus_maculatus