EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSFHEG00000022446 (Gene tree)
Gene ID
105917327
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Fundulus_heteroclitus
Status
putative
Strand
Minus strand
Length
27357 bases
Position
chrKN805764.1:127524-154880
Accession
105917327
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSFHEP00000034602RRM_1PF00076.227.9e-3312
ENSFHEP00000034602RRM_1PF00076.227.9e-3322
ENSFHEP00000034596RRM_1PF00076.228.1e-3312
ENSFHEP00000034596RRM_1PF00076.228.1e-3322
ENSFHEP00000020460RRM_1PF00076.225.8e-2812
ENSFHEP00000020460RRM_1PF00076.225.8e-2822
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSFHET00000029989MSI1-2013747XM_012852106ENSFHEP00000034602349 (aa)XP_012707560A0A147AVZ5
ENSFHET00000035221MSI1-2031949-ENSFHEP00000034596352 (aa)--
ENSFHET00000035217MSI1-202999-ENSFHEP00000020460332 (aa)--
Gene Model
Click here to download ENSFHEG00000022446's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022446's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSFHEG00000022446MSI15137.681ENSFHEG00000010145tardbpl5436.527
ENSFHEG00000022446MSI19771.795ENSFHEG00000000084msi2a9678.947
ENSFHEG00000022446MSI15244.751ENSFHEG00000013108hnrnpaba7938.113
ENSFHEG00000022446MSI15241.622ENSFHEG00000023336hnrnpa1b5741.270
ENSFHEG00000022446MSI15341.176ENSFHEG00000007482HNRNPA39135.632
ENSFHEG00000022446MSI110092.593ENSFHEG00000003560-10092.593
ENSFHEG00000022446MSI18731.250ENSFHEG00000017748rbm388131.250
ENSFHEG00000022446MSI18739.326ENSFHEG00000016786dazap16239.326
ENSFHEG00000022446MSI15344.560ENSFHEG00000005659-8737.634
ENSFHEG00000022446MSI15545.238ENSFHEG00000006838hnrnpd8536.131
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSFHEG00000022446MSI110084.530ENSG00000135097MSI110084.530Homo_sapiens
ENSFHEG00000022446MSI110092.593ENSAPOG00000003191MSI110092.593Acanthochromis_polyacanthus
ENSFHEG00000022446MSI110098.854ENSAPOG00000023458-10098.854Acanthochromis_polyacanthus
ENSFHEG00000022446MSI19084.980ENSAMEG00000013302MSI110066.391Ailuropoda_melanoleuca
ENSFHEG00000022446MSI19483.537ENSACIG00000017754-7294.059Amphilophus_citrinellus
ENSFHEG00000022446MSI19488.754ENSAOCG00000009031-9588.754Amphiprion_ocellaris
ENSFHEG00000022446MSI110092.593ENSAOCG00000003804MSI110092.593Amphiprion_ocellaris
ENSFHEG00000022446MSI110092.593ENSAPEG00000003245MSI110092.593Amphiprion_percula
ENSFHEG00000022446MSI110098.854ENSAPEG00000006857-8498.854Amphiprion_percula
ENSFHEG00000022446MSI110084.507ENSATEG00000023779-10084.507Anabas_testudineus
ENSFHEG00000022446MSI110094.648ENSATEG00000017059MSI110094.648Anabas_testudineus
ENSFHEG00000022446MSI110085.596ENSACAG00000002762MSI110085.596Anolis_carolinensis
ENSFHEG00000022446MSI18285.315ENSANAG00000027901-8885.315Aotus_nancymaae
ENSFHEG00000022446MSI110084.530ENSANAG00000027151MSI110084.530Aotus_nancymaae
ENSFHEG00000022446MSI110098.281ENSACLG00000000117-10099.085Astatotilapia_calliptera
ENSFHEG00000022446MSI110093.162ENSACLG00000011230MSI110093.162Astatotilapia_calliptera
ENSFHEG00000022446MSI19493.417ENSAMXG00000038960msi17693.417Astyanax_mexicanus
ENSFHEG00000022446MSI110084.530ENSBTAG00000009800MSI110086.217Bos_taurus
ENSFHEG00000022446MSI110084.530ENSCJAG00000008578MSI110084.530Callithrix_jacchus
ENSFHEG00000022446MSI110084.254ENSCAFG00000010283MSI110084.254Canis_familiaris
ENSFHEG00000022446MSI19486.495ENSCAFG00020020585MSI110086.495Canis_lupus_dingo
ENSFHEG00000022446MSI110082.289ENSCHIG00000024304MSI110082.289Capra_hircus
ENSFHEG00000022446MSI19485.627ENSTSYG00000033949MSI19585.627Carlito_syrichta
ENSFHEG00000022446MSI19477.316ENSCAPG00000003919MSI18977.316Cavia_aperea
ENSFHEG00000022446MSI19586.047ENSCPOG00000012361MSI110086.257Cavia_porcellus
ENSFHEG00000022446MSI110084.530ENSCCAG00000035567MSI110084.530Cebus_capucinus
ENSFHEG00000022446MSI110084.530ENSCATG00000030019MSI110084.530Cercocebus_atys
ENSFHEG00000022446MSI19486.257ENSCLAG00000011329MSI110086.257Chinchilla_lanigera
ENSFHEG00000022446MSI17884.116ENSCSAG00000002265MSI19684.116Chlorocebus_sabaeus
ENSFHEG00000022446MSI110088.034ENSCPBG00000011349MSI110088.034Chrysemys_picta_bellii
ENSFHEG00000022446MSI19485.671ENSCANG00000040651MSI110085.671Colobus_angolensis_palliatus
ENSFHEG00000022446MSI110084.530ENSCGRG00001018883Msi110084.530Cricetulus_griseus_chok1gshd
ENSFHEG00000022446MSI19485.714ENSCGRG00000002191Msi17285.714Cricetulus_griseus_crigri
ENSFHEG00000022446MSI110091.738ENSCSEG00000005834-10091.738Cynoglossus_semilaevis
ENSFHEG00000022446MSI19488.720ENSCSEG00000011032MSI110089.701Cynoglossus_semilaevis
ENSFHEG00000022446MSI110096.562ENSCSEG00000008352-10096.562Cynoglossus_semilaevis
ENSFHEG00000022446MSI110098.567ENSCVAG00000009100MSI110098.567Cyprinodon_variegatus
ENSFHEG00000022446MSI15166.418ENSCVAG00000017430zgc:1107969466.418Cyprinodon_variegatus
ENSFHEG00000022446MSI17766.972ENSCVAG00000017463-8974.771Cyprinodon_variegatus
ENSFHEG00000022446MSI17992.130ENSDARG00000102015CABZ01037298.19892.130Danio_rerio
ENSFHEG00000022446MSI19488.889ENSDARG00000010710msi110094.860Danio_rerio
ENSFHEG00000022446MSI19482.911ENSDNOG00000005713MSI19182.911Dasypus_novemcinctus
ENSFHEG00000022446MSI19485.030ENSDORG00000005610Msi19485.030Dipodomys_ordii
ENSFHEG00000022446MSI19482.317ENSETEG00000004756MSI110082.317Echinops_telfairi
ENSFHEG00000022446MSI110084.530ENSEASG00005004736MSI110084.530Equus_asinus_asinus
ENSFHEG00000022446MSI110084.530ENSECAG00000017526MSI110084.530Equus_caballus
ENSFHEG00000022446MSI19490.258ENSELUG00000023219MSI19290.258Esox_lucius
ENSFHEG00000022446MSI19487.195ENSELUG00000023280-10086.890Esox_lucius
ENSFHEG00000022446MSI110084.530ENSFCAG00000011007MSI110084.530Felis_catus
ENSFHEG00000022446MSI19490.333ENSFALG00000007574MSI110090.333Ficedula_albicollis
ENSFHEG00000022446MSI19485.366ENSFDAG00000019586MSI110085.366Fukomys_damarensis
ENSFHEG00000022446MSI110094.842ENSGMOG00000001006MSI19994.556Gadus_morhua
ENSFHEG00000022446MSI110083.380ENSGMOG00000017838-10083.380Gadus_morhua
ENSFHEG00000022446MSI19489.695ENSGALG00000007227MSI19975.879Gallus_gallus
ENSFHEG00000022446MSI19492.401ENSGAFG00000021522MSI19492.401Gambusia_affinis
ENSFHEG00000022446MSI110085.886ENSGAFG00000005860-10085.886Gambusia_affinis
ENSFHEG00000022446MSI110097.135ENSGACG00000012679MSI110097.135Gasterosteus_aculeatus
ENSFHEG00000022446MSI110084.488ENSGACG00000008674-10084.488Gasterosteus_aculeatus
ENSFHEG00000022446MSI110088.034ENSGAGG00000016037MSI110088.034Gopherus_agassizii
ENSFHEG00000022446MSI19486.306ENSGGOG00000010328MSI110086.306Gorilla_gorilla
ENSFHEG00000022446MSI110098.281ENSHBUG00000011841-10098.281Haplochromis_burtoni
ENSFHEG00000022446MSI110093.162ENSHBUG00000021921MSI110093.162Haplochromis_burtoni
ENSFHEG00000022446MSI110084.254ENSHGLG00000012782MSI110084.254Heterocephalus_glaber_female
ENSFHEG00000022446MSI19485.366ENSHGLG00100016848MSI110085.366Heterocephalus_glaber_male
ENSFHEG00000022446MSI19191.111ENSHCOG00000012019MSI110086.711Hippocampus_comes
ENSFHEG00000022446MSI110092.635ENSHCOG00000012067-10092.635Hippocampus_comes
ENSFHEG00000022446MSI110091.977ENSIPUG00000001976msi110091.977Ictalurus_punctatus
ENSFHEG00000022446MSI19486.495ENSSTOG00000009799MSI110086.495Ictidomys_tridecemlineatus
ENSFHEG00000022446MSI110072.928ENSJJAG00000010643-10072.222Jaculus_jaculus
ENSFHEG00000022446MSI110084.530ENSJJAG00000010463Msi110084.530Jaculus_jaculus
ENSFHEG00000022446MSI110097.708ENSKMAG00000011251MSI110097.708Kryptolebias_marmoratus
ENSFHEG00000022446MSI19487.195ENSKMAG00000019877-10088.040Kryptolebias_marmoratus
ENSFHEG00000022446MSI110098.281ENSLBEG00000008789MSI110098.281Labrus_bergylta
ENSFHEG00000022446MSI110092.593ENSLBEG00000001375-10092.593Labrus_bergylta
ENSFHEG00000022446MSI19485.088ENSLACG00000018287MSI110085.088Latimeria_chalumnae
ENSFHEG00000022446MSI15279.091ENSLOCG00000008618zgc:1107967179.091Lepisosteus_oculatus
ENSFHEG00000022446MSI19176.435ENSLAFG00000009412MSI110076.435Loxodonta_africana
ENSFHEG00000022446MSI19486.257ENSMFAG00000001798MSI110086.257Macaca_fascicularis
ENSFHEG00000022446MSI19486.257ENSMMUG00000031527MSI19785.345Macaca_mulatta
ENSFHEG00000022446MSI110084.530ENSMNEG00000040034MSI110084.530Macaca_nemestrina
ENSFHEG00000022446MSI19485.671ENSMLEG00000003921MSI110085.671Mandrillus_leucophaeus
ENSFHEG00000022446MSI110092.023ENSMAMG00000018426-10092.023Mastacembelus_armatus
ENSFHEG00000022446MSI110097.421ENSMAMG00000002279MSI110097.421Mastacembelus_armatus
ENSFHEG00000022446MSI110098.281ENSMZEG00005000340-10098.281Maylandia_zebra
ENSFHEG00000022446MSI110093.162ENSMZEG00005026892MSI110093.162Maylandia_zebra
ENSFHEG00000022446MSI16394.675ENSMGAG00000016518-10094.675Meleagris_gallopavo
ENSFHEG00000022446MSI17089.712ENSMAUG00000016820Msi110089.712Mesocricetus_auratus
ENSFHEG00000022446MSI110084.530ENSMICG00000033181MSI110084.530Microcebus_murinus
ENSFHEG00000022446MSI110084.254ENSMOCG00000002286Msi110084.254Microtus_ochrogaster
ENSFHEG00000022446MSI19486.018ENSMMOG00000010492MSI19986.711Mola_mola
ENSFHEG00000022446MSI110084.036ENSMMOG00000012265-10084.036Mola_mola
ENSFHEG00000022446MSI19158.735ENSMODG00000003189-10058.735Monodelphis_domestica
ENSFHEG00000022446MSI110098.567ENSMALG00000017889MSI110098.567Monopterus_albus
ENSFHEG00000022446MSI19492.683ENSMALG00000001426-10092.683Monopterus_albus
ENSFHEG00000022446MSI110083.978MGP_CAROLIEiJ_G0027626Msi110085.714Mus_caroli
ENSFHEG00000022446MSI110083.978ENSMUSG00000054256Msi19988.272Mus_musculus
ENSFHEG00000022446MSI110086.325MGP_PahariEiJ_G0024206Msi110086.325Mus_pahari
ENSFHEG00000022446MSI110083.978MGP_SPRETEiJ_G0028624Msi110085.714Mus_spretus
ENSFHEG00000022446MSI19486.495ENSMPUG00000003168MSI110086.495Mustela_putorius_furo
ENSFHEG00000022446MSI19477.083ENSMLUG00000010313MSI110077.083Myotis_lucifugus
ENSFHEG00000022446MSI19485.714ENSNGAG00000014508Msi19185.714Nannospalax_galili
ENSFHEG00000022446MSI110098.281ENSNBRG00000000841-10098.281Neolamprologus_brichardi
ENSFHEG00000022446MSI18985.656ENSNBRG00000018012MSI19985.656Neolamprologus_brichardi
ENSFHEG00000022446MSI19076.220ENSNLEG00000015636MSI110076.220Nomascus_leucogenys
ENSFHEG00000022446MSI19465.549ENSMEUG00000015759MSI110065.549Notamacropus_eugenii
ENSFHEG00000022446MSI19178.730ENSOPRG00000016879MSI110078.730Ochotona_princeps
ENSFHEG00000022446MSI19485.671ENSODEG00000006328MSI110085.671Octodon_degus
ENSFHEG00000022446MSI110089.835ENSONIG00000019452-10089.835Oreochromis_niloticus
ENSFHEG00000022446MSI110098.281ENSONIG00000011182MSI110098.281Oreochromis_niloticus
ENSFHEG00000022446MSI19486.495ENSOCUG00000027716MSI110086.495Oryctolagus_cuniculus
ENSFHEG00000022446MSI110098.854ENSORLG00000019978-10098.854Oryzias_latipes
ENSFHEG00000022446MSI110091.453ENSORLG00000029593MSI110091.453Oryzias_latipes
ENSFHEG00000022446MSI110091.453ENSORLG00020008266MSI19988.040Oryzias_latipes_hni
ENSFHEG00000022446MSI110098.854ENSORLG00020001208-7198.854Oryzias_latipes_hni
ENSFHEG00000022446MSI110098.854ENSORLG00015013672-7198.854Oryzias_latipes_hsok
ENSFHEG00000022446MSI110091.453ENSORLG00015003916MSI110091.453Oryzias_latipes_hsok
ENSFHEG00000022446MSI110098.854ENSOMEG00000017536MSI110098.854Oryzias_melastigma
ENSFHEG00000022446MSI110091.738ENSOMEG00000002272-10091.738Oryzias_melastigma
ENSFHEG00000022446MSI19982.143ENSOGAG00000003847MSI19982.143Otolemur_garnettii
ENSFHEG00000022446MSI19482.727ENSOARG00000012097MSI110082.727Ovis_aries
ENSFHEG00000022446MSI19485.671ENSPPAG00000043073MSI110085.671Pan_paniscus
ENSFHEG00000022446MSI110084.530ENSPPRG00000000370MSI110084.530Panthera_pardus
ENSFHEG00000022446MSI19486.495ENSPTIG00000008913MSI110086.495Panthera_tigris_altaica
ENSFHEG00000022446MSI110084.530ENSPTRG00000005531MSI110084.530Pan_troglodytes
ENSFHEG00000022446MSI110084.254ENSPANG00000006335MSI110084.254Papio_anubis
ENSFHEG00000022446MSI110092.837ENSPKIG00000023575-10092.837Paramormyrops_kingsleyae
ENSFHEG00000022446MSI110093.410ENSPKIG00000016497MSI110093.410Paramormyrops_kingsleyae
ENSFHEG00000022446MSI19486.322ENSPSIG00000011608-9386.322Pelodiscus_sinensis
ENSFHEG00000022446MSI17981.223ENSPSIG00000009621-10081.223Pelodiscus_sinensis
ENSFHEG00000022446MSI19474.622ENSPMGG00000007743-9272.531Periophthalmus_magnuspinnatus
ENSFHEG00000022446MSI19193.038ENSPMGG00000000514MSI19794.444Periophthalmus_magnuspinnatus
ENSFHEG00000022446MSI19484.273ENSPEMG00000010491Msi19584.273Peromyscus_maniculatus_bairdii
ENSFHEG00000022446MSI110099.140ENSPFOG00000013113MSI110099.140Poecilia_formosa
ENSFHEG00000022446MSI110092.023ENSPFOG00000008319-8692.023Poecilia_formosa
ENSFHEG00000022446MSI110099.140ENSPLAG00000014025-10099.140Poecilia_latipinna
ENSFHEG00000022446MSI110092.023ENSPLAG00000012431-9792.023Poecilia_latipinna
ENSFHEG00000022446MSI110099.140ENSPMEG00000012796MSI110099.140Poecilia_mexicana
ENSFHEG00000022446MSI110091.453ENSPMEG00000007025-8691.453Poecilia_mexicana
ENSFHEG00000022446MSI17786.425ENSPREG00000014574-10094.554Poecilia_reticulata
ENSFHEG00000022446MSI19883.333ENSPREG00000021416-9885.231Poecilia_reticulata
ENSFHEG00000022446MSI110083.702ENSPPYG00000005027MSI110083.702Pongo_abelii
ENSFHEG00000022446MSI17690.355ENSPCAG00000002300MSI17290.355Procavia_capensis
ENSFHEG00000022446MSI110084.530ENSPCOG00000017341MSI110084.530Propithecus_coquereli
ENSFHEG00000022446MSI19470.122ENSPVAG00000002225MSI110070.122Pteropus_vampyrus
ENSFHEG00000022446MSI110098.281ENSPNYG00000002529-10098.281Pundamilia_nyererei
ENSFHEG00000022446MSI110093.162ENSPNYG00000004379MSI110093.162Pundamilia_nyererei
ENSFHEG00000022446MSI110092.264ENSPNAG00000019337msi110092.264Pygocentrus_nattereri
ENSFHEG00000022446MSI19486.174ENSRNOG00000001156Msi110086.174Rattus_norvegicus
ENSFHEG00000022446MSI19486.495ENSRBIG00000036889MSI110086.495Rhinopithecus_bieti
ENSFHEG00000022446MSI19485.455ENSRROG00000041076MSI19385.455Rhinopithecus_roxellana
ENSFHEG00000022446MSI19486.257ENSSBOG00000030259MSI19986.257Saimiri_boliviensis_boliviensis
ENSFHEG00000022446MSI19476.471ENSSHAG00000006834MSI110076.471Sarcophilus_harrisii
ENSFHEG00000022446MSI19494.529ENSSFOG00015014964-9594.529Scleropages_formosus
ENSFHEG00000022446MSI19493.958ENSSFOG00015005350MSI19693.958Scleropages_formosus
ENSFHEG00000022446MSI19492.405ENSSMAG00000018824MSI19894.684Scophthalmus_maximus
ENSFHEG00000022446MSI19493.130ENSSMAG00000009156-7391.626Scophthalmus_maximus
ENSFHEG00000022446MSI110092.877ENSSDUG00000022697-10092.877Seriola_dumerili
ENSFHEG00000022446MSI110098.854ENSSDUG00000001027MSI110098.854Seriola_dumerili
ENSFHEG00000022446MSI110098.854ENSSLDG00000016832MSI110098.854Seriola_lalandi_dorsalis
ENSFHEG00000022446MSI110081.159ENSSLDG00000018706-10081.159Seriola_lalandi_dorsalis
ENSFHEG00000022446MSI110087.749ENSSPUG00000015741MSI110087.749Sphenodon_punctatus
ENSFHEG00000022446MSI19493.902ENSSPAG00000013098-10093.902Stegastes_partitus
ENSFHEG00000022446MSI17780.095ENSSPAG00000014085-10088.021Stegastes_partitus
ENSFHEG00000022446MSI15485.625ENSSPAG00000015573zgc:1107968285.625Stegastes_partitus
ENSFHEG00000022446MSI110084.254ENSSSCG00000029365MSI110086.174Sus_scrofa
ENSFHEG00000022446MSI19487.353ENSTGUG00000009534MSI110087.353Taeniopygia_guttata
ENSFHEG00000022446MSI18987.008ENSTRUG00000016249MSI110087.008Takifugu_rubripes
ENSFHEG00000022446MSI19481.013ENSTRUG00000015636-7982.609Takifugu_rubripes
ENSFHEG00000022446MSI15089.691ENSTRUG00000021586-9989.691Takifugu_rubripes
ENSFHEG00000022446MSI19962.571ENSTNIG00000019814-9962.571Tetraodon_nigroviridis
ENSFHEG00000022446MSI110093.182ENSTNIG00000011469MSI110093.182Tetraodon_nigroviridis
ENSFHEG00000022446MSI19475.824ENSTBEG00000007182MSI110075.824Tupaia_belangeri
ENSFHEG00000022446MSI17689.850ENSTTRG00000005663MSI17889.850Tursiops_truncatus
ENSFHEG00000022446MSI17188.426ENSUAMG00000015514MSI19488.426Ursus_americanus
ENSFHEG00000022446MSI19482.736ENSUMAG00000006176MSI18882.736Ursus_maritimus
ENSFHEG00000022446MSI19485.714ENSVVUG00000020993MSI110084.985Vulpes_vulpes
ENSFHEG00000022446MSI110085.387ENSXETG00000012216msi110085.960Xenopus_tropicalis
ENSFHEG00000022446MSI19179.208ENSXCOG00000017605MSI18979.208Xiphophorus_couchianus
ENSFHEG00000022446MSI110099.140ENSXMAG00000027103MSI110097.297Xiphophorus_maculatus
ENSFHEG00000022446MSI110091.738ENSXMAG00000018237-10091.738Xiphophorus_maculatus

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