EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000022639 (Gene tree)
Gene ID: 105936993
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 12031 bases
Position: chrKN811495.1:947841-959871
Accession: 105936993
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000020710	SAP	PF02037.27	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000030278	-	4652	XM_012878091	ENSFHEP00000020710	818 (aa)	XP_012733545	A0A146ZPG4

Gene Model

Click here to download ENSFHEG00000022639's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022639's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000022639	hnrnpub	74	33.115	ENSFHEG00000014731	si:ch211-107m4.1	92	32.626

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022639	hnrnpub	88	69.643	ENSG00000153187	HNRNPU	99	63.333	Homo_sapiens
ENSFHEG00000022639	hnrnpub	100	80.414	ENSAPOG00000017400	hnrnpub	100	80.390	Acanthochromis_polyacanthus
ENSFHEG00000022639	hnrnpub	99	79.864	ENSACIG00000012138	hnrnpub	97	84.715	Amphilophus_citrinellus
ENSFHEG00000022639	hnrnpub	100	81.873	ENSAOCG00000015843	hnrnpub	100	80.268	Amphiprion_ocellaris
ENSFHEG00000022639	hnrnpub	100	81.873	ENSAPEG00000014679	hnrnpub	100	80.268	Amphiprion_percula
ENSFHEG00000022639	hnrnpub	98	81.527	ENSATEG00000016178	hnrnpub	97	80.590	Anabas_testudineus
ENSFHEG00000022639	hnrnpub	88	66.667	ENSACAG00000004511	HNRNPU	78	66.667	Anolis_carolinensis
ENSFHEG00000022639	hnrnpub	81	55.136	ENSANAG00000033895	-	87	57.590	Aotus_nancymaae
ENSFHEG00000022639	hnrnpub	100	80.508	ENSACLG00000008165	hnrnpub	100	80.145	Astatotilapia_calliptera
ENSFHEG00000022639	hnrnpub	88	66.667	ENSBTAG00000007606	HNRNPU	80	69.643	Bos_taurus
ENSFHEG00000022639	hnrnpub	88	66.667	ENSCJAG00000016914	HNRNPU	80	69.643	Callithrix_jacchus
ENSFHEG00000022639	hnrnpub	62	59.963	ENSCAFG00020000918	HNRNPU	75	53.857	Canis_lupus_dingo
ENSFHEG00000022639	hnrnpub	81	55.136	ENSCHIG00000004900	HNRNPU	75	53.857	Capra_hircus
ENSFHEG00000022639	hnrnpub	69	71.429	ENSCPOG00000011887	HNRNPU	80	71.429	Cavia_porcellus
ENSFHEG00000022639	hnrnpub	88	69.643	ENSCCAG00000037859	-	80	69.643	Cebus_capucinus
ENSFHEG00000022639	hnrnpub	88	69.643	ENSCATG00000035273	HNRNPU	80	69.643	Cercocebus_atys
ENSFHEG00000022639	hnrnpub	70	68.333	ENSCLAG00000007100	HNRNPU	80	71.429	Chinchilla_lanigera
ENSFHEG00000022639	hnrnpub	81	55.136	ENSCSAG00000009219	HNRNPU	75	54.003	Chlorocebus_sabaeus
ENSFHEG00000022639	hnrnpub	88	69.643	ENSCHOG00000001387	HNRNPU	77	69.643	Choloepus_hoffmanni
ENSFHEG00000022639	hnrnpub	82	58.854	ENSCPBG00000009415	HNRNPU	66	67.797	Chrysemys_picta_bellii
ENSFHEG00000022639	hnrnpub	90	57.895	ENSCANG00000022780	HNRNPU	78	69.643	Colobus_angolensis_palliatus
ENSFHEG00000022639	hnrnpub	69	69.643	ENSCGRG00001020525	Hnrnpu	78	69.643	Cricetulus_griseus_chok1gshd
ENSFHEG00000022639	hnrnpub	100	73.765	ENSCSEG00000010804	hnrnpub	100	75.882	Cynoglossus_semilaevis
ENSFHEG00000022639	hnrnpub	88	82.282	ENSCVAG00000004280	hnrnpub	96	84.142	Cyprinodon_variegatus
ENSFHEG00000022639	hnrnpub	100	60.335	ENSDARG00000004735	hnrnpub	100	58.451	Danio_rerio
ENSFHEG00000022639	hnrnpub	100	59.196	ENSDARG00000015206	hnrnpua	100	56.506	Danio_rerio
ENSFHEG00000022639	hnrnpub	99	50.121	ENSDNOG00000000215	HNRNPU	86	76.087	Dasypus_novemcinctus
ENSFHEG00000022639	hnrnpub	62	59.963	ENSDORG00000015491	Hnrnpu	74	54.641	Dipodomys_ordii
ENSFHEG00000022639	hnrnpub	95	54.834	ENSETEG00000014565	HNRNPU	79	69.643	Echinops_telfairi
ENSFHEG00000022639	hnrnpub	82	54.829	ENSEASG00005003017	HNRNPU	75	53.835	Equus_asinus_asinus
ENSFHEG00000022639	hnrnpub	82	54.748	ENSECAG00000007955	HNRNPU	75	53.835	Equus_caballus
ENSFHEG00000022639	hnrnpub	87	67.864	ENSELUG00000011966	hnrnpua	97	64.947	Esox_lucius
ENSFHEG00000022639	hnrnpub	100	71.016	ENSELUG00000010733	hnrnpub	100	71.429	Esox_lucius
ENSFHEG00000022639	hnrnpub	62	59.779	ENSFCAG00000002156	HNRNPU	74	53.566	Felis_catus
ENSFHEG00000022639	hnrnpub	77	60.526	ENSFDAG00000006026	HNRNPU	99	71.429	Fukomys_damarensis
ENSFHEG00000022639	hnrnpub	100	69.104	ENSGMOG00000001755	hnrnpub	81	76.947	Gadus_morhua
ENSFHEG00000022639	hnrnpub	78	70.690	ENSGALG00000010671	HNRNPU	78	70.690	Gallus_gallus
ENSFHEG00000022639	hnrnpub	100	84.304	ENSGAFG00000009369	hnrnpub	100	88.955	Gambusia_affinis
ENSFHEG00000022639	hnrnpub	100	70.408	ENSGACG00000004679	hnrnpub	99	70.862	Gasterosteus_aculeatus
ENSFHEG00000022639	hnrnpub	88	66.667	ENSGGOG00000004061	HNRNPU	80	69.643	Gorilla_gorilla
ENSFHEG00000022639	hnrnpub	100	80.508	ENSHBUG00000012290	hnrnpub	100	79.661	Haplochromis_burtoni
ENSFHEG00000022639	hnrnpub	70	68.333	ENSHGLG00000010594	-	78	71.429	Heterocephalus_glaber_female
ENSFHEG00000022639	hnrnpub	75	71.429	ENSHGLG00100015093	HNRNPU	99	71.429	Heterocephalus_glaber_male
ENSFHEG00000022639	hnrnpub	100	69.340	ENSHCOG00000020091	hnrnpub	83	74.610	Hippocampus_comes
ENSFHEG00000022639	hnrnpub	78	89.362	ENSIPUG00000007749	hnrnpu	95	81.481	Ictalurus_punctatus
ENSFHEG00000022639	hnrnpub	69	69.643	ENSJJAG00000011371	Hnrnpu	83	60.526	Jaculus_jaculus
ENSFHEG00000022639	hnrnpub	100	81.643	ENSKMAG00000004532	hnrnpub	100	81.039	Kryptolebias_marmoratus
ENSFHEG00000022639	hnrnpub	100	76.859	ENSLBEG00000022520	hnrnpub	100	79.187	Labrus_bergylta
ENSFHEG00000022639	hnrnpub	90	67.857	ENSLACG00000017463	HNRNPU	80	67.857	Latimeria_chalumnae
ENSFHEG00000022639	hnrnpub	89	91.489	ENSLOCG00000016652	hnrnpua	79	91.489	Lepisosteus_oculatus
ENSFHEG00000022639	hnrnpub	88	69.643	ENSLAFG00000021377	HNRNPU	80	69.643	Loxodonta_africana
ENSFHEG00000022639	hnrnpub	88	69.643	ENSMFAG00000037308	HNRNPU	80	69.643	Macaca_fascicularis
ENSFHEG00000022639	hnrnpub	81	55.136	ENSMMUG00000021098	HNRNPU	75	54.003	Macaca_mulatta
ENSFHEG00000022639	hnrnpub	88	69.643	ENSMNEG00000043645	HNRNPU	80	69.643	Macaca_nemestrina
ENSFHEG00000022639	hnrnpub	100	82.360	ENSMAMG00000007196	hnrnpub	100	81.409	Mastacembelus_armatus
ENSFHEG00000022639	hnrnpub	100	80.508	ENSMZEG00005003185	hnrnpub	100	80.145	Maylandia_zebra
ENSFHEG00000022639	hnrnpub	71	69.643	ENSMAUG00000008842	Hnrnpu	80	69.643	Mesocricetus_auratus
ENSFHEG00000022639	hnrnpub	88	69.643	ENSMICG00000004616	HNRNPU	80	69.643	Microcebus_murinus
ENSFHEG00000022639	hnrnpub	71	69.643	ENSMOCG00000015623	Hnrnpu	80	69.643	Microtus_ochrogaster
ENSFHEG00000022639	hnrnpub	88	66.071	ENSMODG00000006515	HNRNPU	79	66.071	Monodelphis_domestica
ENSFHEG00000022639	hnrnpub	96	80.353	ENSMALG00000018243	hnrnpub	99	79.597	Monopterus_albus
ENSFHEG00000022639	hnrnpub	62	60.259	MGP_CAROLIEiJ_G0014962	Hnrnpu	75	54.082	Mus_caroli
ENSFHEG00000022639	hnrnpub	62	60.259	ENSMUSG00000039630	Hnrnpu	75	54.082	Mus_musculus
ENSFHEG00000022639	hnrnpub	62	60.074	MGP_PahariEiJ_G0028193	Hnrnpu	75	53.936	Mus_pahari
ENSFHEG00000022639	hnrnpub	62	60.259	MGP_SPRETEiJ_G0015761	Hnrnpu	75	54.082	Mus_spretus
ENSFHEG00000022639	hnrnpub	88	65.000	ENSMLUG00000000475	HNRNPU	81	67.857	Myotis_lucifugus
ENSFHEG00000022639	hnrnpub	81	52.312	ENSNGAG00000019075	Hnrnpu	75	54.148	Nannospalax_galili
ENSFHEG00000022639	hnrnpub	100	80.630	ENSNBRG00000017855	hnrnpub	100	80.266	Neolamprologus_brichardi
ENSFHEG00000022639	hnrnpub	69	66.071	ENSMEUG00000000541	HNRNPU	78	66.071	Notamacropus_eugenii
ENSFHEG00000022639	hnrnpub	100	78.928	ENSONIG00000001260	hnrnpub	100	77.101	Oreochromis_niloticus
ENSFHEG00000022639	hnrnpub	70	66.667	ENSOCUG00000014469	HNRNPU	74	69.643	Oryctolagus_cuniculus
ENSFHEG00000022639	hnrnpub	100	82.603	ENSORLG00000016114	hnrnpub	100	81.752	Oryzias_latipes
ENSFHEG00000022639	hnrnpub	100	83.212	ENSORLG00020005363	hnrnpub	100	81.995	Oryzias_latipes_hni
ENSFHEG00000022639	hnrnpub	100	82.989	ENSORLG00015001190	hnrnpub	100	81.774	Oryzias_latipes_hsok
ENSFHEG00000022639	hnrnpub	100	80.488	ENSOMEG00000014951	hnrnpub	100	81.463	Oryzias_melastigma
ENSFHEG00000022639	hnrnpub	81	55.287	ENSOGAG00000014024	HNRNPU	75	54.148	Otolemur_garnettii
ENSFHEG00000022639	hnrnpub	88	66.667	ENSOARG00000004985	HNRNPU	86	69.643	Ovis_aries
ENSFHEG00000022639	hnrnpub	88	69.643	ENSPPAG00000038652	HNRNPU	80	69.643	Pan_paniscus
ENSFHEG00000022639	hnrnpub	69	69.643	ENSPPRG00000002662	HNRNPU	79	69.643	Panthera_pardus
ENSFHEG00000022639	hnrnpub	88	69.643	ENSPTRG00000002182	HNRNPU	80	69.643	Pan_troglodytes
ENSFHEG00000022639	hnrnpub	81	55.136	ENSPANG00000011643	HNRNPU	87	57.277	Papio_anubis
ENSFHEG00000022639	hnrnpub	100	64.109	ENSPKIG00000006885	hnrnpua	100	62.130	Paramormyrops_kingsleyae
ENSFHEG00000022639	hnrnpub	100	63.195	ENSPKIG00000022332	hnrnpub	100	62.618	Paramormyrops_kingsleyae
ENSFHEG00000022639	hnrnpub	88	66.071	ENSPCIG00000008657	HNRNPU	79	66.071	Phascolarctos_cinereus
ENSFHEG00000022639	hnrnpub	74	91.639	ENSPFOG00000002908	hnrnpub	100	90.557	Poecilia_formosa
ENSFHEG00000022639	hnrnpub	100	89.212	ENSPLAG00000004160	hnrnpub	100	90.061	Poecilia_latipinna
ENSFHEG00000022639	hnrnpub	88	69.643	ENSPCOG00000018655	-	82	69.643	Propithecus_coquereli
ENSFHEG00000022639	hnrnpub	81	53.858	ENSPCOG00000003883	-	77	52.907	Propithecus_coquereli
ENSFHEG00000022639	hnrnpub	88	69.643	ENSPVAG00000002581	HNRNPU	80	69.643	Pteropus_vampyrus
ENSFHEG00000022639	hnrnpub	100	80.751	ENSPNYG00000021642	hnrnpub	100	80.387	Pundamilia_nyererei
ENSFHEG00000022639	hnrnpub	100	63.744	ENSPNAG00000001055	hnrnpub	100	62.678	Pygocentrus_nattereri
ENSFHEG00000022639	hnrnpub	62	60.259	ENSRNOG00000033790	Hnrnpu	75	54.227	Rattus_norvegicus
ENSFHEG00000022639	hnrnpub	81	54.532	ENSRBIG00000031519	HNRNPU	87	56.495	Rhinopithecus_bieti
ENSFHEG00000022639	hnrnpub	83	54.386	ENSRROG00000041642	HNRNPU	82	69.643	Rhinopithecus_roxellana
ENSFHEG00000022639	hnrnpub	100	63.658	ENSSFOG00015001124	hnrnpub	100	63.754	Scleropages_formosus
ENSFHEG00000022639	hnrnpub	100	63.306	ENSSFOG00015019004	hnrnpu	100	60.743	Scleropages_formosus
ENSFHEG00000022639	hnrnpub	85	81.986	ENSSMAG00000003607	hnrnpub	100	77.687	Scophthalmus_maximus
ENSFHEG00000022639	hnrnpub	100	81.731	ENSSDUG00000005912	hnrnpub	100	81.611	Seriola_dumerili
ENSFHEG00000022639	hnrnpub	100	81.317	ENSSLDG00000004899	hnrnpub	100	81.198	Seriola_lalandi_dorsalis
ENSFHEG00000022639	hnrnpub	88	80.488	ENSSPUG00000011393	HNRNPU	64	70.175	Sphenodon_punctatus
ENSFHEG00000022639	hnrnpub	100	80.414	ENSSPAG00000011853	hnrnpub	100	80.970	Stegastes_partitus
ENSFHEG00000022639	hnrnpub	88	66.667	ENSSSCG00000010877	HNRNPU	80	69.643	Sus_scrofa
ENSFHEG00000022639	hnrnpub	100	74.136	ENSTRUG00000007759	hnrnpub	100	73.628	Takifugu_rubripes
ENSFHEG00000022639	hnrnpub	100	70.167	ENSTNIG00000009725	hnrnpub	100	70.096	Tetraodon_nigroviridis
ENSFHEG00000022639	hnrnpub	88	69.643	ENSUAMG00000021120	HNRNPU	99	50.835	Ursus_americanus
ENSFHEG00000022639	hnrnpub	70	60.748	ENSUMAG00000012322	HNRNPU	85	63.158	Ursus_maritimus
ENSFHEG00000022639	hnrnpub	82	66.667	ENSVPAG00000010520	HNRNPU	83	69.643	Vicugna_pacos
ENSFHEG00000022639	hnrnpub	61	62.183	ENSVVUG00000026524	HNRNPU	73	64.632	Vulpes_vulpes
ENSFHEG00000022639	hnrnpub	80	52.933	ENSXETG00000011386	hnrnpu	75	62.025	Xenopus_tropicalis
ENSFHEG00000022639	hnrnpub	100	85.369	ENSXMAG00000010356	hnrnpub	100	89.734	Xiphophorus_maculatus