EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000022656 (Gene tree)
Gene ID: 105916213
Gene Symbol: sf1
Alias: wu:fc09f06|znf162
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 16811 bases
Position: chrKN805694.1:426262-443072
Accession: 105916213
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000034782	KH_1	PF00013.29	3.6e-06	1	1
ENSFHEP00000034782	zf-CCHC	PF00098.23	0.00049	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000035341	-	5134	XM_012850597	ENSFHEP00000034782	673 (aa)	XP_012706051	UPI000644E329

Gene Model

Click here to download ENSFHEG00000022656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022656	sf1	97	88.333	ENSAPOG00000012341	sf1	97	88.636	Acanthochromis_polyacanthus
ENSFHEG00000022656	sf1	59	77.251	ENSAMEG00000017828	SF1	58	82.058	Ailuropoda_melanoleuca
ENSFHEG00000022656	sf1	97	77.156	ENSACIG00000016514	sf1	97	83.510	Amphilophus_citrinellus
ENSFHEG00000022656	sf1	97	88.771	ENSAOCG00000010934	sf1	97	89.074	Amphiprion_ocellaris
ENSFHEG00000022656	sf1	97	88.771	ENSAPEG00000009498	sf1	97	89.074	Amphiprion_percula
ENSFHEG00000022656	sf1	67	89.912	ENSATEG00000001894	sf1	97	88.333	Anabas_testudineus
ENSFHEG00000022656	sf1	84	65.033	ENSANAG00000022607	-	77	78.963	Aotus_nancymaae
ENSFHEG00000022656	sf1	61	76.815	ENSANAG00000026664	-	91	80.155	Aotus_nancymaae
ENSFHEG00000022656	sf1	68	83.696	ENSAMXG00000003630	sf1	59	83.188	Astyanax_mexicanus
ENSFHEG00000022656	sf1	61	75.870	ENSBTAG00000001035	SF1	63	80.670	Bos_taurus
ENSFHEG00000022656	sf1	61	76.102	ENSCJAG00000002780	SF1	75	68.340	Callithrix_jacchus
ENSFHEG00000022656	sf1	61	76.102	ENSCAFG00000014239	SF1	59	80.670	Canis_familiaris
ENSFHEG00000022656	sf1	61	76.102	ENSCAFG00020014381	SF1	59	81.186	Canis_lupus_dingo
ENSFHEG00000022656	sf1	61	76.102	ENSCHIG00000025867	SF1	69	80.670	Capra_hircus
ENSFHEG00000022656	sf1	59	77.197	ENSCAPG00000010762	SF1	66	81.481	Cavia_aperea
ENSFHEG00000022656	sf1	59	77.251	ENSCPOG00000012290	SF1	69	82.011	Cavia_porcellus
ENSFHEG00000022656	sf1	61	76.102	ENSCCAG00000037881	SF1	91	80.155	Cebus_capucinus
ENSFHEG00000022656	sf1	59	70.560	ENSCCAG00000023781	-	82	71.768	Cebus_capucinus
ENSFHEG00000022656	sf1	61	76.102	ENSCATG00000011564	SF1	91	80.155	Cercocebus_atys
ENSFHEG00000022656	sf1	61	76.102	ENSCSAG00000007258	SF1	69	80.670	Chlorocebus_sabaeus
ENSFHEG00000022656	sf1	57	71.712	ENSCHOG00000006008	SF1	66	76.111	Choloepus_hoffmanni
ENSFHEG00000022656	sf1	63	81.352	ENSCPBG00000023763	SF1	52	79.268	Chrysemys_picta_bellii
ENSFHEG00000022656	sf1	60	57.518	ENSCING00000005564	-	87	58.124	Ciona_intestinalis
ENSFHEG00000022656	sf1	53	56.316	ENSCSAVG00000009055	-	65	65.818	Ciona_savignyi
ENSFHEG00000022656	sf1	61	76.102	ENSCANG00000042201	SF1	91	80.155	Colobus_angolensis_palliatus
ENSFHEG00000022656	sf1	61	76.334	ENSCGRG00001003677	Sf1	66	80.670	Cricetulus_griseus_chok1gshd
ENSFHEG00000022656	sf1	59	77.435	ENSCGRG00000001708	Sf1	68	82.011	Cricetulus_griseus_crigri
ENSFHEG00000022656	sf1	97	86.536	ENSCSEG00000014375	sf1	94	84.932	Cynoglossus_semilaevis
ENSFHEG00000022656	sf1	98	90.483	ENSCVAG00000001670	sf1	97	92.716	Cyprinodon_variegatus
ENSFHEG00000022656	sf1	70	83.227	ENSDARG00000008188	sf1	97	80.763	Danio_rerio
ENSFHEG00000022656	sf1	61	76.334	ENSDNOG00000001282	SF1	69	80.412	Dasypus_novemcinctus
ENSFHEG00000022656	sf1	61	76.102	ENSDORG00000016334	Sf1	59	81.186	Dipodomys_ordii
ENSFHEG00000022656	sf1	61	76.102	ENSEASG00005018272	SF1	69	80.155	Equus_asinus_asinus
ENSFHEG00000022656	sf1	61	76.334	ENSECAG00000024544	SF1	69	80.412	Equus_caballus
ENSFHEG00000022656	sf1	53	78.075	ENSEEUG00000001058	SF1	83	82.687	Erinaceus_europaeus
ENSFHEG00000022656	sf1	77	79.252	ENSELUG00000013225	sf1	60	85.033	Esox_lucius
ENSFHEG00000022656	sf1	61	76.102	ENSFCAG00000012231	SF1	75	68.932	Felis_catus
ENSFHEG00000022656	sf1	59	77.197	ENSFDAG00000009833	SF1	66	81.481	Fukomys_damarensis
ENSFHEG00000022656	sf1	72	76.230	ENSGMOG00000007469	sf1	62	92.398	Gadus_morhua
ENSFHEG00000022656	sf1	89	89.256	ENSGAFG00000019284	sf1	98	89.256	Gambusia_affinis
ENSFHEG00000022656	sf1	63	81.119	ENSGAGG00000021691	SF1	68	70.757	Gopherus_agassizii
ENSFHEG00000022656	sf1	67	89.059	ENSHBUG00000011598	sf1	67	89.934	Haplochromis_burtoni
ENSFHEG00000022656	sf1	61	76.102	ENSHGLG00000009541	SF1	66	80.155	Heterocephalus_glaber_female
ENSFHEG00000022656	sf1	61	66.741	ENSHGLG00100008255	-	74	72.938	Heterocephalus_glaber_male
ENSFHEG00000022656	sf1	59	77.197	ENSHGLG00100013879	-	66	81.481	Heterocephalus_glaber_male
ENSFHEG00000022656	sf1	70	85.593	ENSHCOG00000011388	sf1	97	82.979	Hippocampus_comes
ENSFHEG00000022656	sf1	64	68.254	ENSSTOG00000024353	-	68	70.801	Ictidomys_tridecemlineatus
ENSFHEG00000022656	sf1	59	77.197	ENSSTOG00000009790	-	59	82.540	Ictidomys_tridecemlineatus
ENSFHEG00000022656	sf1	61	76.334	ENSJJAG00000011788	Sf1	59	81.443	Jaculus_jaculus
ENSFHEG00000022656	sf1	84	89.631	ENSKMAG00000005854	sf1	91	87.899	Kryptolebias_marmoratus
ENSFHEG00000022656	sf1	67	79.449	ENSLOCG00000002130	sf1	72	81.023	Lepisosteus_oculatus
ENSFHEG00000022656	sf1	59	78.810	ENSLAFG00000007201	SF1	63	83.069	Loxodonta_africana
ENSFHEG00000022656	sf1	61	76.102	ENSMFAG00000033122	SF1	91	80.155	Macaca_fascicularis
ENSFHEG00000022656	sf1	61	76.102	ENSMMUG00000022606	SF1	90	81.530	Macaca_mulatta
ENSFHEG00000022656	sf1	61	76.102	ENSMNEG00000037901	SF1	91	80.155	Macaca_nemestrina
ENSFHEG00000022656	sf1	59	77.251	ENSMLEG00000040706	SF1	91	80.260	Mandrillus_leucophaeus
ENSFHEG00000022656	sf1	67	91.009	ENSMAMG00000001780	sf1	67	91.028	Mastacembelus_armatus
ENSFHEG00000022656	sf1	67	89.059	ENSMZEG00005009196	sf1	67	89.934	Maylandia_zebra
ENSFHEG00000022656	sf1	61	76.334	ENSMAUG00000014064	Sf1	66	80.670	Mesocricetus_auratus
ENSFHEG00000022656	sf1	61	76.102	ENSMICG00000001202	SF1	91	79.949	Microcebus_murinus
ENSFHEG00000022656	sf1	61	76.761	ENSMOCG00000022038	Sf1	66	80.928	Microtus_ochrogaster
ENSFHEG00000022656	sf1	67	86.784	ENSMMOG00000020474	sf1	67	86.813	Mola_mola
ENSFHEG00000022656	sf1	60	77.778	ENSMODG00000029407	SF1	80	81.794	Monodelphis_domestica
ENSFHEG00000022656	sf1	67	84.141	ENSMALG00000020521	sf1	73	84.176	Monopterus_albus
ENSFHEG00000022656	sf1	61	76.334	MGP_CAROLIEiJ_G0022607	Sf1	99	94.737	Mus_caroli
ENSFHEG00000022656	sf1	61	76.334	ENSMUSG00000024949	Sf1	99	94.737	Mus_musculus
ENSFHEG00000022656	sf1	61	76.334	MGP_PahariEiJ_G0014101	Sf1	99	94.737	Mus_pahari
ENSFHEG00000022656	sf1	61	76.334	MGP_SPRETEiJ_G0023518	Sf1	99	94.737	Mus_spretus
ENSFHEG00000022656	sf1	59	77.014	ENSMPUG00000012684	SF1	58	82.586	Mustela_putorius_furo
ENSFHEG00000022656	sf1	64	73.128	ENSMLUG00000029800	-	65	76.804	Myotis_lucifugus
ENSFHEG00000022656	sf1	59	77.251	ENSMLUG00000015217	-	58	82.850	Myotis_lucifugus
ENSFHEG00000022656	sf1	61	76.334	ENSNGAG00000005550	Sf1	66	80.412	Nannospalax_galili
ENSFHEG00000022656	sf1	61	76.102	ENSNLEG00000005236	-	91	80.155	Nomascus_leucogenys
ENSFHEG00000022656	sf1	58	77.831	ENSMEUG00000013424	SF1	69	82.527	Notamacropus_eugenii
ENSFHEG00000022656	sf1	53	76.720	ENSOPRG00000005008	SF1	66	82.090	Ochotona_princeps
ENSFHEG00000022656	sf1	67	88.840	ENSONIG00000015728	sf1	67	89.716	Oreochromis_niloticus
ENSFHEG00000022656	sf1	59	77.251	ENSOCUG00000026486	SF1	59	82.058	Oryctolagus_cuniculus
ENSFHEG00000022656	sf1	97	87.368	ENSORLG00000011853	sf1	66	89.625	Oryzias_latipes
ENSFHEG00000022656	sf1	97	87.368	ENSORLG00020011834	sf1	66	89.625	Oryzias_latipes_hni
ENSFHEG00000022656	sf1	68	88.596	ENSORLG00015012855	sf1	66	88.962	Oryzias_latipes_hsok
ENSFHEG00000022656	sf1	97	88.737	ENSOMEG00000005210	sf1	97	87.671	Oryzias_melastigma
ENSFHEG00000022656	sf1	61	76.102	ENSOGAG00000016196	SF1	59	80.670	Otolemur_garnettii
ENSFHEG00000022656	sf1	61	76.102	ENSOARG00000009166	SF1	66	80.155	Ovis_aries
ENSFHEG00000022656	sf1	59	78.606	ENSPPAG00000002799	-	90	81.530	Pan_paniscus
ENSFHEG00000022656	sf1	59	77.251	ENSPPRG00000013566	SF1	58	83.425	Panthera_pardus
ENSFHEG00000022656	sf1	59	77.251	ENSPTIG00000016141	SF1	67	80.729	Panthera_tigris_altaica
ENSFHEG00000022656	sf1	61	77.412	ENSPTRG00000003846	SF1	91	80.155	Pan_troglodytes
ENSFHEG00000022656	sf1	61	76.102	ENSPANG00000020754	SF1	91	80.155	Papio_anubis
ENSFHEG00000022656	sf1	61	76.334	ENSPEMG00000010463	Sf1	66	80.670	Peromyscus_maniculatus_bairdii
ENSFHEG00000022656	sf1	61	76.995	ENSPCIG00000018173	SF1	61	81.443	Phascolarctos_cinereus
ENSFHEG00000022656	sf1	97	89.666	ENSPFOG00000013683	sf1	97	90.122	Poecilia_formosa
ENSFHEG00000022656	sf1	90	89.379	ENSPLAG00000018076	sf1	93	89.379	Poecilia_latipinna
ENSFHEG00000022656	sf1	97	89.514	ENSPMEG00000005726	sf1	97	89.970	Poecilia_mexicana
ENSFHEG00000022656	sf1	97	89.666	ENSPREG00000004155	sf1	97	91.641	Poecilia_reticulata
ENSFHEG00000022656	sf1	61	76.102	ENSPPYG00000003098	-	72	80.670	Pongo_abelii
ENSFHEG00000022656	sf1	61	75.862	ENSPCAG00000013631	SF1	75	68.164	Procavia_capensis
ENSFHEG00000022656	sf1	61	76.102	ENSPCOG00000027546	SF1	91	79.949	Propithecus_coquereli
ENSFHEG00000022656	sf1	60	76.690	ENSPVAG00000016938	SF1	75	69.685	Pteropus_vampyrus
ENSFHEG00000022656	sf1	67	89.497	ENSPNYG00000004673	sf1	67	89.497	Pundamilia_nyererei
ENSFHEG00000022656	sf1	68	83.007	ENSPNAG00000013072	sf1	97	80.030	Pygocentrus_nattereri
ENSFHEG00000022656	sf1	61	76.102	ENSRNOG00000021085	Sf1	60	81.029	Rattus_norvegicus
ENSFHEG00000022656	sf1	61	76.102	ENSRBIG00000042818	SF1	91	80.155	Rhinopithecus_bieti
ENSFHEG00000022656	sf1	60	77.305	ENSRROG00000045655	SF1	91	80.260	Rhinopithecus_roxellana
ENSFHEG00000022656	sf1	52	38.356	YLR116W	MSL5	56	44.203	Saccharomyces_cerevisiae
ENSFHEG00000022656	sf1	86	61.238	ENSSBOG00000022267	-	90	66.581	Saimiri_boliviensis_boliviensis
ENSFHEG00000022656	sf1	72	70.816	ENSSHAG00000006841	SF1	70	82.199	Sarcophilus_harrisii
ENSFHEG00000022656	sf1	71	79.503	ENSSFOG00015021978	sf1	66	81.400	Scleropages_formosus
ENSFHEG00000022656	sf1	84	85.714	ENSSMAG00000007549	sf1	70	90.850	Scophthalmus_maximus
ENSFHEG00000022656	sf1	67	91.247	ENSSDUG00000003903	sf1	70	91.266	Seriola_dumerili
ENSFHEG00000022656	sf1	59	72.922	ENSSARG00000008180	SF1	71	77.249	Sorex_araneus
ENSFHEG00000022656	sf1	59	79.070	ENSSPUG00000012907	SF1	58	86.517	Sphenodon_punctatus
ENSFHEG00000022656	sf1	97	89.378	ENSSPAG00000019060	sf1	97	89.074	Stegastes_partitus
ENSFHEG00000022656	sf1	61	76.334	ENSSSCG00000013021	SF1	69	80.412	Sus_scrofa
ENSFHEG00000022656	sf1	73	70.709	ENSTNIG00000004820	sf1	74	74.121	Tetraodon_nigroviridis
ENSFHEG00000022656	sf1	59	72.973	ENSTBEG00000013133	SF1	54	75.881	Tupaia_belangeri
ENSFHEG00000022656	sf1	59	72.447	ENSTTRG00000008857	SF1	68	76.720	Tursiops_truncatus
ENSFHEG00000022656	sf1	61	76.102	ENSUMAG00000007268	SF1	71	80.155	Ursus_maritimus
ENSFHEG00000022656	sf1	61	76.102	ENSVVUG00000028585	SF1	69	80.670	Vulpes_vulpes
ENSFHEG00000022656	sf1	85	72.774	ENSXETG00000008434	sf1	60	87.356	Xenopus_tropicalis
ENSFHEG00000022656	sf1	71	85.484	ENSXCOG00000003704	sf1	70	91.711	Xiphophorus_couchianus
ENSFHEG00000022656	sf1	97	89.970	ENSXMAG00000007822	sf1	97	91.945	Xiphophorus_maculatus