EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000022665 (Gene tree)
Gene ID: 105916212
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: mRNA decay activator protein ZFP36L2-A-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 2342 bases
Position: chrKN805694.1:391715-394056
Accession: 105916212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000020734	zf-CCCH	PF00642.24	1.2e-28	1	3
ENSFHEP00000020734	zf-CCCH	PF00642.24	1.2e-28	2	3
ENSFHEP00000020734	zf-CCCH	PF00642.24	1.2e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000030314	-	1616	XM_012850596	ENSFHEP00000020734	310 (aa)	XP_012706050	UPI0006447BA5

Gene Model

Click here to download ENSFHEG00000022665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022665's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022665	cth1	89	65.591	ENSAPOG00000012552	cth1	94	65.950	Acanthochromis_polyacanthus
ENSFHEG00000022665	cth1	88	58.123	ENSACIG00000016026	cth1	99	57.098	Amphilophus_citrinellus
ENSFHEG00000022665	cth1	100	65.495	ENSAOCG00000001644	cth1	100	66.454	Amphiprion_ocellaris
ENSFHEG00000022665	cth1	100	65.495	ENSAPEG00000008930	cth1	100	66.454	Amphiprion_percula
ENSFHEG00000022665	cth1	99	63.580	ENSATEG00000002281	cth1	97	64.815	Anabas_testudineus
ENSFHEG00000022665	cth1	89	57.401	ENSACLG00000015353	cth1	94	57.143	Astatotilapia_calliptera
ENSFHEG00000022665	cth1	98	50.769	ENSAMXG00000025717	cth1	92	50.993	Astyanax_mexicanus
ENSFHEG00000022665	cth1	100	59.627	ENSCSEG00000014617	cth1	100	62.422	Cynoglossus_semilaevis
ENSFHEG00000022665	cth1	100	63.694	ENSCVAG00000001680	cth1	65	64.331	Cyprinodon_variegatus
ENSFHEG00000022665	cth1	91	54.362	ENSDARG00000057328	cth1	90	54.027	Danio_rerio
ENSFHEG00000022665	cth1	99	48.824	ENSELUG00000012738	cth1	89	50.820	Esox_lucius
ENSFHEG00000022665	cth1	98	58.147	ENSGMOG00000007360	cth1	100	55.205	Gadus_morhua
ENSFHEG00000022665	cth1	100	74.051	ENSGAFG00000019288	cth1	100	73.734	Gambusia_affinis
ENSFHEG00000022665	cth1	99	60.703	ENSGACG00000000802	cth1	99	58.861	Gasterosteus_aculeatus
ENSFHEG00000022665	cth1	100	55.272	ENSHBUG00000014400	cth1	100	56.013	Haplochromis_burtoni
ENSFHEG00000022665	cth1	96	49.508	ENSHCOG00000010276	cth1	87	49.466	Hippocampus_comes
ENSFHEG00000022665	cth1	97	52.351	ENSIPUG00000018040	cth1	90	53.177	Ictalurus_punctatus
ENSFHEG00000022665	cth1	100	66.561	ENSKMAG00000005944	cth1	100	67.516	Kryptolebias_marmoratus
ENSFHEG00000022665	cth1	100	61.491	ENSLBEG00000019253	cth1	100	63.608	Labrus_bergylta
ENSFHEG00000022665	cth1	68	50.467	ENSLOCG00000002047	cth1	97	50.467	Lepisosteus_oculatus
ENSFHEG00000022665	cth1	99	47.312	ENSMAMG00000001525	cth1	62	60.338	Mastacembelus_armatus
ENSFHEG00000022665	cth1	100	55.591	ENSMZEG00005022335	cth1	100	56.329	Maylandia_zebra
ENSFHEG00000022665	cth1	94	59.076	ENSMMOG00000020518	cth1	100	62.171	Mola_mola
ENSFHEG00000022665	cth1	100	51.482	ENSMALG00000020738	cth1	61	60.000	Monopterus_albus
ENSFHEG00000022665	cth1	88	54.545	ENSNBRG00000022789	cth1	88	55.396	Neolamprologus_brichardi
ENSFHEG00000022665	cth1	99	55.696	ENSONIG00000021318	cth1	99	56.329	Oreochromis_niloticus
ENSFHEG00000022665	cth1	100	53.355	ENSORLG00000022847	cth1	100	53.035	Oryzias_latipes
ENSFHEG00000022665	cth1	100	53.035	ENSORLG00020011979	cth1	100	53.035	Oryzias_latipes_hni
ENSFHEG00000022665	cth1	100	52.077	ENSORLG00015013084	cth1	100	53.674	Oryzias_latipes_hsok
ENSFHEG00000022665	cth1	81	56.471	ENSOMEG00000005809	cth1	81	56.419	Oryzias_melastigma
ENSFHEG00000022665	cth1	96	46.440	ENSPKIG00000015883	cth1	88	44.984	Paramormyrops_kingsleyae
ENSFHEG00000022665	cth1	98	59.502	ENSPMGG00000004275	cth1	99	61.682	Periophthalmus_magnuspinnatus
ENSFHEG00000022665	cth1	100	71.338	ENSPFOG00000013583	cth1	94	70.701	Poecilia_formosa
ENSFHEG00000022665	cth1	100	71.975	ENSPLAG00000018158	cth1	94	71.338	Poecilia_latipinna
ENSFHEG00000022665	cth1	100	71.338	ENSPMEG00000005744	cth1	100	70.701	Poecilia_mexicana
ENSFHEG00000022665	cth1	99	71.565	ENSPREG00000004099	cth1	100	70.288	Poecilia_reticulata
ENSFHEG00000022665	cth1	83	54.864	ENSPNYG00000016705	cth1	81	55.512	Pundamilia_nyererei
ENSFHEG00000022665	cth1	99	50.915	ENSPNAG00000013147	cth1	90	51.815	Pygocentrus_nattereri
ENSFHEG00000022665	cth1	90	51.505	ENSSFOG00015017190	cth1	87	50.709	Scleropages_formosus
ENSFHEG00000022665	cth1	100	60.748	ENSSMAG00000007977	cth1	100	63.551	Scophthalmus_maximus
ENSFHEG00000022665	cth1	100	62.424	ENSSDUG00000004321	cth1	100	64.329	Seriola_dumerili
ENSFHEG00000022665	cth1	100	62.614	ENSSLDG00000012760	cth1	100	64.742	Seriola_lalandi_dorsalis
ENSFHEG00000022665	cth1	99	62.195	ENSSLDG00000010023	-	100	64.329	Seriola_lalandi_dorsalis
ENSFHEG00000022665	cth1	100	62.006	ENSSLDG00000004516	-	100	64.134	Seriola_lalandi_dorsalis
ENSFHEG00000022665	cth1	100	65.300	ENSSPAG00000018659	cth1	100	66.562	Stegastes_partitus
ENSFHEG00000022665	cth1	100	57.716	ENSTRUG00000012770	cth1	100	59.568	Takifugu_rubripes
ENSFHEG00000022665	cth1	100	57.367	ENSTNIG00000000740	cth1	100	58.307	Tetraodon_nigroviridis
ENSFHEG00000022665	cth1	83	62.403	ENSXCOG00000003710	cth1	82	62.397	Xiphophorus_couchianus
ENSFHEG00000022665	cth1	100	73.567	ENSXMAG00000023885	cth1	100	72.930	Xiphophorus_maculatus