EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000022676 (Gene tree)
Gene ID: 105932459
Gene Symbol: -
Alias: zgc:92772
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 7607 bases
Position: chrKN811389.1:254354-261960
Accession: 105932459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000020727	MMR_HSR1	PF01926.23	2.7e-07	1	1
ENSFHEP00000034785	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000035339	-	576	-	ENSFHEP00000020727	191 (aa)	-	-
ENSFHET00000035345	-	1774	XM_012871641	ENSFHEP00000034785	218 (aa)	XP_012727095	UPI0006451538

Gene Model

Click here to download ENSFHEG00000022676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000022676	-	72	39.877	ENSFHEG00000007101	RAB7A	78	39.877
ENSFHEG00000022676	-	68	35.333	ENSFHEG00000010055	hrasb	85	36.420
ENSFHEG00000022676	-	53	30.252	ENSFHEG00000009894	arl4cb	59	30.252
ENSFHEG00000022676	-	77	54.386	ENSFHEG00000010509	rab4a	80	54.386
ENSFHEG00000022676	-	74	32.927	ENSFHEG00000004875	si:ch73-116o1.2	82	34.659
ENSFHEG00000022676	-	70	30.282	ENSFHEG00000019106	rasl11b	56	30.282
ENSFHEG00000022676	-	74	46.296	ENSFHEG00000019455	rab18a	79	46.296
ENSFHEG00000022676	-	84	41.398	ENSFHEG00000013106	rab42a	85	41.398
ENSFHEG00000022676	-	94	33.796	ENSFHEG00000013691	rab34a	80	33.796
ENSFHEG00000022676	-	79	36.047	ENSFHEG00000023069	rab23	80	35.602
ENSFHEG00000022676	-	74	42.857	ENSFHEG00000012702	rab22a	83	42.857
ENSFHEG00000022676	-	74	33.533	ENSFHEG00000016504	si:cabz01085950.1	82	33.533
ENSFHEG00000022676	-	96	44.550	ENSFHEG00000022176	zgc:171927	99	44.550
ENSFHEG00000022676	-	74	30.636	ENSFHEG00000019684	rasl11a	67	30.636
ENSFHEG00000022676	-	78	40.462	ENSFHEG00000011483	zgc:101559	74	40.462
ENSFHEG00000022676	-	73	46.429	ENSFHEG00000009378	rab15	78	43.373
ENSFHEG00000022676	-	72	35.669	ENSFHEG00000022524	rab6bb	75	35.669
ENSFHEG00000022676	-	76	41.765	ENSFHEG00000009417	rab9b	77	41.765
ENSFHEG00000022676	-	72	36.943	ENSFHEG00000015015	rabl2	58	36.943
ENSFHEG00000022676	-	100	86.239	ENSFHEG00000019668	rab11a	100	86.239
ENSFHEG00000022676	-	78	54.386	ENSFHEG00000001296	rab2a	81	54.386
ENSFHEG00000022676	-	93	83.251	ENSFHEG00000000832	rab11al	97	83.251
ENSFHEG00000022676	-	75	46.626	ENSFHEG00000015268	-	74	46.626
ENSFHEG00000022676	-	82	45.251	ENSFHEG00000021221	rab13	98	45.251
ENSFHEG00000022676	-	70	38.272	ENSFHEG00000006551	rab36	58	38.272
ENSFHEG00000022676	-	77	36.842	ENSFHEG00000012041	si:dkey-34d22.5	77	36.842
ENSFHEG00000022676	-	79	38.764	ENSFHEG00000021111	rab9a	86	38.764
ENSFHEG00000022676	-	100	95.872	ENSFHEG00000022642	rab11ba	100	95.872
ENSFHEG00000022676	-	99	64.186	ENSFHEG00000014186	rab25a	99	64.186
ENSFHEG00000022676	-	96	45.933	ENSFHEG00000014414	-	99	45.933
ENSFHEG00000022676	-	94	34.404	ENSFHEG00000006820	rab33ba	90	34.404
ENSFHEG00000022676	-	76	49.398	ENSFHEG00000004891	rab35b	99	43.541
ENSFHEG00000022676	-	80	46.591	ENSFHEG00000002885	-	83	46.591
ENSFHEG00000022676	-	80	43.137	ENSFHEG00000004319	rab12	83	38.426
ENSFHEG00000022676	-	84	38.037	ENSFHEG00000022141	rab33a	76	37.500
ENSFHEG00000022676	-	76	52.410	ENSFHEG00000014924	rab1ba	83	52.410
ENSFHEG00000022676	-	70	34.839	ENSFHEG00000009108	kras	87	35.928
ENSFHEG00000022676	-	73	30.723	ENSFHEG00000003385	rasd4	77	30.723
ENSFHEG00000022676	-	57	50.926	ENSFHEG00000000767	si:dkey-16l2.16	70	50.926
ENSFHEG00000022676	-	72	36.943	ENSFHEG00000001477	-	62	36.943
ENSFHEG00000022676	-	77	52.096	ENSFHEG00000000695	-	78	52.096
ENSFHEG00000022676	-	73	45.000	ENSFHEG00000014087	RAB15	98	38.278
ENSFHEG00000022676	-	100	63.303	ENSFHEG00000003018	rab25b	100	63.303
ENSFHEG00000022676	-	94	41.262	ENSFHEG00000014070	rab5aa	90	41.262
ENSFHEG00000022676	-	52	42.424	ENSFHEG00000018056	rab38b	81	42.424
ENSFHEG00000022676	-	72	39.877	ENSFHEG00000005588	RAB7A	72	39.877
ENSFHEG00000022676	-	54	30.328	ENSFHEG00000013017	-	61	30.328
ENSFHEG00000022676	-	71	32.500	ENSFHEG00000002502	si:dkey-13a21.4	77	32.500
ENSFHEG00000022676	-	75	52.778	ENSFHEG00000018450	RAB14	74	52.740
ENSFHEG00000022676	-	72	36.943	ENSFHEG00000015996	RAB41	74	36.943
ENSFHEG00000022676	-	72	30.675	ENSFHEG00000015993	RAB29	80	30.675
ENSFHEG00000022676	-	74	39.521	ENSFHEG00000018764	RAB9A	77	39.521
ENSFHEG00000022676	-	73	32.500	ENSFHEG00000003799	rheb	87	32.500
ENSFHEG00000022676	-	96	39.048	ENSFHEG00000013918	rab30	97	39.048
ENSFHEG00000022676	-	75	47.239	ENSFHEG00000012117	rab5c	89	41.063
ENSFHEG00000022676	-	75	43.902	ENSFHEG00000020035	rab18b	80	43.902
ENSFHEG00000022676	-	74	30.061	ENSFHEG00000008212	rhebl1	88	30.061
ENSFHEG00000022676	-	77	47.337	ENSFHEG00000020877	RAB39B	79	47.337
ENSFHEG00000022676	-	96	45.755	ENSFHEG00000022985	rab1ab	99	45.755
ENSFHEG00000022676	-	100	98.165	ENSFHEG00000018353	rab11bb	100	98.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022676	-	100	98.165	ENSAPOG00000023455	rab11bb	100	98.165	Acanthochromis_polyacanthus
ENSFHEG00000022676	-	100	98.429	ENSACIG00000019631	rab11bb	100	98.429	Amphilophus_citrinellus
ENSFHEG00000022676	-	100	99.541	ENSACIG00000024376	-	100	99.541	Amphilophus_citrinellus
ENSFHEG00000022676	-	100	99.541	ENSAOCG00000018849	-	100	99.541	Amphiprion_ocellaris
ENSFHEG00000022676	-	100	98.165	ENSAOCG00000018239	rab11bb	100	98.165	Amphiprion_ocellaris
ENSFHEG00000022676	-	100	98.165	ENSAPEG00000016590	rab11bb	100	98.165	Amphiprion_percula
ENSFHEG00000022676	-	100	98.165	ENSATEG00000017696	rab11bb	100	98.165	Anabas_testudineus
ENSFHEG00000022676	-	100	100.000	ENSATEG00000023725	-	100	100.000	Anabas_testudineus
ENSFHEG00000022676	-	94	98.058	ENSAPLG00000011046	-	94	98.058	Anas_platyrhynchos
ENSFHEG00000022676	-	100	98.165	ENSACLG00000007076	rab11bb	100	98.165	Astatotilapia_calliptera
ENSFHEG00000022676	-	100	99.541	ENSACLG00000005446	-	100	99.541	Astatotilapia_calliptera
ENSFHEG00000022676	-	100	96.330	ENSAMXG00000037623	-	100	96.330	Astyanax_mexicanus
ENSFHEG00000022676	-	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSFHEG00000022676	-	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSFHEG00000022676	-	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSFHEG00000022676	-	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSFHEG00000022676	-	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSFHEG00000022676	-	100	98.165	ENSCSEG00000012149	rab11bb	100	98.165	Cynoglossus_semilaevis
ENSFHEG00000022676	-	100	99.083	ENSCSEG00000007239	-	100	99.083	Cynoglossus_semilaevis
ENSFHEG00000022676	-	100	98.624	ENSCVAG00000019718	-	100	98.624	Cyprinodon_variegatus
ENSFHEG00000022676	-	100	96.330	ENSCVAG00000019751	-	100	96.330	Cyprinodon_variegatus
ENSFHEG00000022676	-	100	98.165	ENSCVAG00000017021	-	100	98.165	Cyprinodon_variegatus
ENSFHEG00000022676	-	100	97.248	ENSDARG00000090086	rab11bb	100	97.248	Danio_rerio
ENSFHEG00000022676	-	99	94.009	ENSETEG00000000905	-	99	94.009	Echinops_telfairi
ENSFHEG00000022676	-	99	93.953	ENSEASG00005003708	-	99	93.953	Equus_asinus_asinus
ENSFHEG00000022676	-	99	93.953	ENSECAG00000000716	RAB11B	99	93.953	Equus_caballus
ENSFHEG00000022676	-	100	98.165	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSFHEG00000022676	-	100	97.248	ENSELUG00000000916	-	100	97.248	Esox_lucius
ENSFHEG00000022676	-	100	97.248	ENSELUG00000021148	rab11bb	100	97.248	Esox_lucius
ENSFHEG00000022676	-	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSFHEG00000022676	-	99	94.907	ENSGMOG00000009668	-	99	94.907	Gadus_morhua
ENSFHEG00000022676	-	100	98.165	ENSGMOG00000009211	rab11bb	100	98.165	Gadus_morhua
ENSFHEG00000022676	-	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSFHEG00000022676	-	100	98.165	ENSGAFG00000007102	rab11bb	100	98.165	Gambusia_affinis
ENSFHEG00000022676	-	100	97.706	ENSGACG00000015479	rab11bb	100	97.706	Gasterosteus_aculeatus
ENSFHEG00000022676	-	100	95.872	ENSGACG00000013297	-	99	95.872	Gasterosteus_aculeatus
ENSFHEG00000022676	-	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSFHEG00000022676	-	100	99.541	ENSHBUG00000009947	-	100	99.541	Haplochromis_burtoni
ENSFHEG00000022676	-	100	98.165	ENSHBUG00000014777	rab11bb	100	98.165	Haplochromis_burtoni
ENSFHEG00000022676	-	100	97.248	ENSHCOG00000000954	-	100	97.248	Hippocampus_comes
ENSFHEG00000022676	-	100	97.706	ENSHCOG00000002423	rab11bb	100	97.706	Hippocampus_comes
ENSFHEG00000022676	-	100	93.119	ENSHCOG00000000985	-	100	93.119	Hippocampus_comes
ENSFHEG00000022676	-	100	98.165	ENSIPUG00000019927	rab11bb	100	98.165	Ictalurus_punctatus
ENSFHEG00000022676	-	100	96.330	ENSIPUG00000025100	rab11b	100	96.330	Ictalurus_punctatus
ENSFHEG00000022676	-	100	99.541	ENSKMAG00000006170	-	100	99.541	Kryptolebias_marmoratus
ENSFHEG00000022676	-	100	98.165	ENSKMAG00000009033	rab11bb	100	98.165	Kryptolebias_marmoratus
ENSFHEG00000022676	-	100	98.165	ENSLBEG00000015248	rab11bb	100	98.165	Labrus_bergylta
ENSFHEG00000022676	-	100	98.624	ENSLBEG00000004172	-	100	98.624	Labrus_bergylta
ENSFHEG00000022676	-	100	91.284	ENSLBEG00000005981	-	100	91.284	Labrus_bergylta
ENSFHEG00000022676	-	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSFHEG00000022676	-	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSFHEG00000022676	-	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSFHEG00000022676	-	100	97.706	ENSMAMG00000006378	rab11bb	100	97.706	Mastacembelus_armatus
ENSFHEG00000022676	-	100	98.165	ENSMAMG00000018533	-	100	98.165	Mastacembelus_armatus
ENSFHEG00000022676	-	100	99.541	ENSMZEG00005010975	-	100	99.541	Maylandia_zebra
ENSFHEG00000022676	-	100	98.165	ENSMZEG00005003352	rab11bb	100	98.165	Maylandia_zebra
ENSFHEG00000022676	-	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSFHEG00000022676	-	100	99.541	ENSMMOG00000001250	-	100	99.541	Mola_mola
ENSFHEG00000022676	-	99	96.313	ENSMMOG00000001238	-	99	96.313	Mola_mola
ENSFHEG00000022676	-	94	98.049	ENSMMOG00000007917	rab11bb	100	98.049	Mola_mola
ENSFHEG00000022676	-	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSFHEG00000022676	-	100	98.165	ENSMALG00000022187	rab11bb	100	98.165	Monopterus_albus
ENSFHEG00000022676	-	94	88.406	ENSMLUG00000006677	-	100	88.406	Myotis_lucifugus
ENSFHEG00000022676	-	100	98.165	ENSNBRG00000000372	rab11bb	100	98.165	Neolamprologus_brichardi
ENSFHEG00000022676	-	100	99.541	ENSNBRG00000023885	-	100	99.541	Neolamprologus_brichardi
ENSFHEG00000022676	-	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSFHEG00000022676	-	100	99.541	ENSONIG00000002544	-	100	99.541	Oreochromis_niloticus
ENSFHEG00000022676	-	100	98.165	ENSONIG00000010435	rab11bb	100	98.165	Oreochromis_niloticus
ENSFHEG00000022676	-	60	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSFHEG00000022676	-	99	97.696	ENSORLG00000015284	-	72	97.696	Oryzias_latipes
ENSFHEG00000022676	-	100	97.706	ENSORLG00000013938	rab11bb	100	97.706	Oryzias_latipes
ENSFHEG00000022676	-	99	97.696	ENSORLG00020020844	RAB11B	99	97.696	Oryzias_latipes_hni
ENSFHEG00000022676	-	100	97.706	ENSORLG00020019393	rab11bb	100	97.706	Oryzias_latipes_hni
ENSFHEG00000022676	-	99	97.696	ENSORLG00015016999	RAB11B	99	97.696	Oryzias_latipes_hsok
ENSFHEG00000022676	-	100	97.706	ENSORLG00015020173	rab11bb	100	97.706	Oryzias_latipes_hsok
ENSFHEG00000022676	-	100	98.165	ENSOMEG00000017806	-	100	98.165	Oryzias_melastigma
ENSFHEG00000022676	-	100	98.624	ENSOMEG00000002562	-	100	98.624	Oryzias_melastigma
ENSFHEG00000022676	-	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSFHEG00000022676	-	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSFHEG00000022676	-	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSFHEG00000022676	-	100	98.165	ENSPKIG00000011640	rab11bb	100	98.165	Paramormyrops_kingsleyae
ENSFHEG00000022676	-	100	97.706	ENSPKIG00000011703	-	100	97.706	Paramormyrops_kingsleyae
ENSFHEG00000022676	-	98	97.664	ENSPKIG00000001389	-	69	97.664	Paramormyrops_kingsleyae
ENSFHEG00000022676	-	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSFHEG00000022676	-	100	98.165	ENSPMGG00000009435	rab11bb	100	98.165	Periophthalmus_magnuspinnatus
ENSFHEG00000022676	-	100	97.706	ENSPMGG00000014333	-	100	97.706	Periophthalmus_magnuspinnatus
ENSFHEG00000022676	-	99	94.931	ENSPMGG00000014336	-	99	94.931	Periophthalmus_magnuspinnatus
ENSFHEG00000022676	-	97	96.698	ENSPCIG00000020371	-	99	96.698	Phascolarctos_cinereus
ENSFHEG00000022676	-	100	98.165	ENSPFOG00000024114	-	100	98.165	Poecilia_formosa
ENSFHEG00000022676	-	100	99.541	ENSPFOG00000006224	-	100	99.541	Poecilia_formosa
ENSFHEG00000022676	-	100	98.165	ENSPLAG00000001598	rab11bb	100	98.165	Poecilia_latipinna
ENSFHEG00000022676	-	100	99.541	ENSPLAG00000014207	-	100	99.541	Poecilia_latipinna
ENSFHEG00000022676	-	100	98.165	ENSPMEG00000012389	rab11bb	100	98.165	Poecilia_mexicana
ENSFHEG00000022676	-	100	99.541	ENSPMEG00000007842	-	100	99.541	Poecilia_mexicana
ENSFHEG00000022676	-	100	99.083	ENSPREG00000006336	-	100	99.083	Poecilia_reticulata
ENSFHEG00000022676	-	100	98.165	ENSPREG00000014269	rab11bb	100	98.165	Poecilia_reticulata
ENSFHEG00000022676	-	100	98.165	ENSPNYG00000004098	rab11bb	100	98.165	Pundamilia_nyererei
ENSFHEG00000022676	-	100	99.541	ENSPNYG00000019611	-	100	99.541	Pundamilia_nyererei
ENSFHEG00000022676	-	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSFHEG00000022676	-	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSFHEG00000022676	-	100	74.312	ENSSFOG00015006245	-	100	74.312	Scleropages_formosus
ENSFHEG00000022676	-	100	97.706	ENSSFOG00015009042	rab11bb	100	97.706	Scleropages_formosus
ENSFHEG00000022676	-	100	96.789	ENSSMAG00000018613	-	100	96.789	Scophthalmus_maximus
ENSFHEG00000022676	-	100	97.706	ENSSMAG00000004922	rab11bb	100	97.706	Scophthalmus_maximus
ENSFHEG00000022676	-	100	99.541	ENSSDUG00000002934	-	100	99.541	Seriola_dumerili
ENSFHEG00000022676	-	100	98.165	ENSSDUG00000013558	rab11bb	100	98.165	Seriola_dumerili
ENSFHEG00000022676	-	100	99.541	ENSSLDG00000005275	-	100	99.541	Seriola_lalandi_dorsalis
ENSFHEG00000022676	-	100	98.165	ENSSLDG00000020676	rab11bb	100	98.165	Seriola_lalandi_dorsalis
ENSFHEG00000022676	-	100	97.248	ENSSPUG00000002243	-	100	97.248	Sphenodon_punctatus
ENSFHEG00000022676	-	100	98.429	ENSSPAG00000011419	rab11bb	100	98.429	Stegastes_partitus
ENSFHEG00000022676	-	100	99.541	ENSSPAG00000014559	-	100	99.541	Stegastes_partitus
ENSFHEG00000022676	-	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSFHEG00000022676	-	100	98.165	ENSTRUG00000022029	rab11bb	100	98.165	Takifugu_rubripes
ENSFHEG00000022676	-	99	96.313	ENSTRUG00000021614	-	99	96.313	Takifugu_rubripes
ENSFHEG00000022676	-	99	99.074	ENSTRUG00000021619	-	100	99.074	Takifugu_rubripes
ENSFHEG00000022676	-	100	97.248	ENSTNIG00000011081	rab11bb	100	97.248	Tetraodon_nigroviridis
ENSFHEG00000022676	-	93	97.537	ENSTNIG00000002003	-	100	97.537	Tetraodon_nigroviridis
ENSFHEG00000022676	-	99	95.853	ENSTNIG00000013184	-	99	95.853	Tetraodon_nigroviridis
ENSFHEG00000022676	-	99	99.074	ENSTNIG00000013182	-	100	99.074	Tetraodon_nigroviridis
ENSFHEG00000022676	-	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSFHEG00000022676	-	100	96.347	ENSXETG00000025484	rab11b.1	99	96.347	Xenopus_tropicalis
ENSFHEG00000022676	-	100	98.165	ENSXCOG00000008042	-	100	98.165	Xiphophorus_couchianus
ENSFHEG00000022676	-	100	99.541	ENSXCOG00000009190	-	100	99.541	Xiphophorus_couchianus
ENSFHEG00000022676	-	100	99.083	ENSXMAG00000024840	-	100	99.083	Xiphophorus_maculatus
ENSFHEG00000022676	-	100	98.165	ENSXMAG00000011926	rab11bb	100	98.165	Xiphophorus_maculatus