EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000022926 (Gene tree)
Gene ID: 105916202
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA-binding protein 4.1-like
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 4863 bases
Position: chrKN805694.1:5507-10369
Accession: 105916202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000034947	zf-CCHC	PF00098.23	8.4e-08	1	1
ENSFHEP00000034947	RRM_5	PF13893.6	1.2e-07	1	1
ENSFHEP00000034947	RRM_1	PF00076.22	1.1e-30	1	2
ENSFHEP00000034947	RRM_1	PF00076.22	1.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000030611	-	4010	XM_012850576	ENSFHEP00000034947	418 (aa)	XP_012706030	UPI0006450009

Gene Model

Click here to download ENSFHEG00000022926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000022926	rbm4.1	65	53.947	ENSFHEG00000023096	rbm4.3	97	54.248

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022926	rbm4.1	100	79.196	ENSAPOG00000012353	rbm4.1	100	79.669	Acanthochromis_polyacanthus
ENSFHEG00000022926	rbm4.1	100	79.621	ENSACIG00000016482	rbm4.1	100	79.858	Amphilophus_citrinellus
ENSFHEG00000022926	rbm4.1	100	79.905	ENSAOCG00000010915	rbm4.1	100	80.378	Amphiprion_ocellaris
ENSFHEG00000022926	rbm4.1	100	79.905	ENSAPEG00000009494	rbm4.1	100	80.378	Amphiprion_percula
ENSFHEG00000022926	rbm4.1	100	77.725	ENSATEG00000001904	rbm4.1	100	78.199	Anabas_testudineus
ENSFHEG00000022926	rbm4.1	100	78.910	ENSACLG00000007722	rbm4.1	100	79.147	Astatotilapia_calliptera
ENSFHEG00000022926	rbm4.1	96	45.209	ENSACLG00000007740	-	94	46.734	Astatotilapia_calliptera
ENSFHEG00000022926	rbm4.1	100	61.137	ENSAMXG00000036611	rbm4.1	100	62.796	Astyanax_mexicanus
ENSFHEG00000022926	rbm4.1	100	70.309	ENSCSEG00000014365	rbm4.1	100	70.309	Cynoglossus_semilaevis
ENSFHEG00000022926	rbm4.1	94	47.727	ENSCSEG00000014359	-	94	48.500	Cynoglossus_semilaevis
ENSFHEG00000022926	rbm4.1	100	87.321	ENSCVAG00000019349	rbm4.1	100	87.799	Cyprinodon_variegatus
ENSFHEG00000022926	rbm4.1	100	64.637	ENSDARG00000036386	rbm4.1	100	65.581	Danio_rerio
ENSFHEG00000022926	rbm4.1	100	48.148	ENSDARG00000055080	rbm4.2	100	49.409	Danio_rerio
ENSFHEG00000022926	rbm4.1	100	61.792	ENSELUG00000013205	rbm4.1	100	62.150	Esox_lucius
ENSFHEG00000022926	rbm4.1	90	49.347	ENSGMOG00000007455	-	99	49.296	Gadus_morhua
ENSFHEG00000022926	rbm4.1	100	64.858	ENSGMOG00000007464	rbm4.1	100	66.509	Gadus_morhua
ENSFHEG00000022926	rbm4.1	100	86.635	ENSGAFG00000019302	rbm4.1	100	86.635	Gambusia_affinis
ENSFHEG00000022926	rbm4.1	94	48.737	ENSGACG00000000821	-	94	50.000	Gasterosteus_aculeatus
ENSFHEG00000022926	rbm4.1	99	86.735	ENSGACG00000000822	rbm4.1	100	86.735	Gasterosteus_aculeatus
ENSFHEG00000022926	rbm4.1	100	78.910	ENSHBUG00000011610	rbm4.1	100	79.147	Haplochromis_burtoni
ENSFHEG00000022926	rbm4.1	92	65.897	ENSHCOG00000011403	rbm4.1	95	67.008	Hippocampus_comes
ENSFHEG00000022926	rbm4.1	100	49.406	ENSIPUG00000022937	rbm4.2	100	50.118	Ictalurus_punctatus
ENSFHEG00000022926	rbm4.1	100	59.773	ENSIPUG00000022931	rbm4.1	100	61.591	Ictalurus_punctatus
ENSFHEG00000022926	rbm4.1	100	78.622	ENSKMAG00000006556	rbm4.1	100	78.622	Kryptolebias_marmoratus
ENSFHEG00000022926	rbm4.1	75	50.000	ENSKMAG00000006528	-	99	43.578	Kryptolebias_marmoratus
ENSFHEG00000022926	rbm4.1	95	48.371	ENSLBEG00000019756	-	90	60.256	Labrus_bergylta
ENSFHEG00000022926	rbm4.1	100	75.059	ENSLBEG00000019782	rbm4.1	100	75.059	Labrus_bergylta
ENSFHEG00000022926	rbm4.1	94	50.495	ENSMAMG00000001760	-	94	51.741	Mastacembelus_armatus
ENSFHEG00000022926	rbm4.1	100	78.910	ENSMAMG00000001765	rbm4.1	100	79.384	Mastacembelus_armatus
ENSFHEG00000022926	rbm4.1	100	78.910	ENSMZEG00005009205	rbm4.1	100	79.147	Maylandia_zebra
ENSFHEG00000022926	rbm4.1	100	79.481	ENSMMOG00000020479	rbm4.1	100	79.481	Mola_mola
ENSFHEG00000022926	rbm4.1	95	50.995	ENSMALG00000020557	-	94	52.381	Monopterus_albus
ENSFHEG00000022926	rbm4.1	100	79.572	ENSMALG00000020544	rbm4.1	100	80.048	Monopterus_albus
ENSFHEG00000022926	rbm4.1	100	78.910	ENSNBRG00000017755	rbm4.1	100	79.147	Neolamprologus_brichardi
ENSFHEG00000022926	rbm4.1	100	78.673	ENSONIG00000015730	rbm4.1	100	78.910	Oreochromis_niloticus
ENSFHEG00000022926	rbm4.1	100	77.804	ENSORLG00000012496	rbm4.1	100	77.804	Oryzias_latipes
ENSFHEG00000022926	rbm4.1	100	77.804	ENSORLG00020012454	rbm4.1	100	77.804	Oryzias_latipes_hni
ENSFHEG00000022926	rbm4.1	100	77.804	ENSORLG00015013678	rbm4.1	100	77.804	Oryzias_latipes_hsok
ENSFHEG00000022926	rbm4.1	100	77.804	ENSOMEG00000001001	rbm4.1	100	77.804	Oryzias_melastigma
ENSFHEG00000022926	rbm4.1	100	60.839	ENSPKIG00000020805	rbm4.1	85	82.609	Paramormyrops_kingsleyae
ENSFHEG00000022926	rbm4.1	100	86.874	ENSPFOG00000012675	rbm4.1	100	86.874	Poecilia_formosa
ENSFHEG00000022926	rbm4.1	99	47.268	ENSPFOG00000012685	-	99	47.608	Poecilia_formosa
ENSFHEG00000022926	rbm4.1	100	86.874	ENSPLAG00000018572	rbm4.1	100	86.874	Poecilia_latipinna
ENSFHEG00000022926	rbm4.1	100	86.874	ENSPMEG00000006290	rbm4.1	100	86.874	Poecilia_mexicana
ENSFHEG00000022926	rbm4.1	99	44.681	ENSPREG00000003764	-	99	44.522	Poecilia_reticulata
ENSFHEG00000022926	rbm4.1	100	86.874	ENSPREG00000003724	rbm4.1	100	86.874	Poecilia_reticulata
ENSFHEG00000022926	rbm4.1	100	78.910	ENSPNYG00000004662	rbm4.1	100	79.147	Pundamilia_nyererei
ENSFHEG00000022926	rbm4.1	100	51.408	ENSPNAG00000013057	rbm4.2	100	51.174	Pygocentrus_nattereri
ENSFHEG00000022926	rbm4.1	100	62.824	ENSPNAG00000002539	rbm4.1	100	64.637	Pygocentrus_nattereri
ENSFHEG00000022926	rbm4.1	100	61.717	ENSSFOG00015021996	sf1	100	63.403	Scleropages_formosus
ENSFHEG00000022926	rbm4.1	100	75.534	ENSSMAG00000007571	rbm4.1	100	75.534	Scophthalmus_maximus
ENSFHEG00000022926	rbm4.1	100	77.725	ENSSDUG00000003925	rbm4.1	100	79.147	Seriola_dumerili
ENSFHEG00000022926	rbm4.1	94	50.374	ENSSDUG00000003936	-	94	51.485	Seriola_dumerili
ENSFHEG00000022926	rbm4.1	100	77.725	ENSSLDG00000013147	rbm4.1	100	79.147	Seriola_lalandi_dorsalis
ENSFHEG00000022926	rbm4.1	94	49.747	ENSSLDG00000013157	-	94	51.122	Seriola_lalandi_dorsalis
ENSFHEG00000022926	rbm4.1	100	78.960	ENSSPAG00000019053	rbm4.1	100	80.615	Stegastes_partitus
ENSFHEG00000022926	rbm4.1	99	45.991	ENSSPAG00000019046	-	94	47.407	Stegastes_partitus
ENSFHEG00000022926	rbm4.1	99	46.778	ENSTRUG00000013328	-	99	46.301	Takifugu_rubripes
ENSFHEG00000022926	rbm4.1	100	74.347	ENSTRUG00000013334	rbm4.1	100	74.347	Takifugu_rubripes
ENSFHEG00000022926	rbm4.1	100	81.579	ENSTNIG00000004821	rbm4.1	100	54.545	Tetraodon_nigroviridis
ENSFHEG00000022926	rbm4.1	94	48.737	ENSTNIG00000000316	-	94	49.250	Tetraodon_nigroviridis
ENSFHEG00000022926	rbm4.1	100	87.351	ENSXCOG00000003731	rbm4.1	100	87.351	Xiphophorus_couchianus
ENSFHEG00000022926	rbm4.1	99	47.045	ENSXMAG00000008059	-	94	72.393	Xiphophorus_maculatus
ENSFHEG00000022926	rbm4.1	100	87.112	ENSXMAG00000008069	rbm4.1	100	87.112	Xiphophorus_maculatus