EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000022954 (Gene tree)
Gene ID: 110369153
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 10235 bases
Position: chrKN805600.1:75257-85491
Accession: 110369153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000034967	TRM13	PF05206.14	2.1e-63	1	1
ENSFHEP00000020996	TRM13	PF05206.14	2.1e-63	1	1
ENSFHEP00000034967	zf-U11-48K	PF05253.12	3.4e-09	1	1
ENSFHEP00000020996	zf-U11-48K	PF05253.12	3.6e-09	1	1
ENSFHEP00000034967	zf-TRM13_CCCH	PF11722.8	3e-11	1	1
ENSFHEP00000020996	zf-TRM13_CCCH	PF11722.8	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000030648	-	1564	XM_021321606	ENSFHEP00000020996	406 (aa)	XP_021177281	UPI000B390FCF
ENSFHET00000030640	-	1504	XM_021321614	ENSFHEP00000034967	386 (aa)	XP_021177289	UPI000B37EADC

Gene Model

Click here to download ENSFHEG00000022954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022954	trmt13	97	51.122	ENSG00000122435	TRMT13	96	47.857	Homo_sapiens
ENSFHEG00000022954	trmt13	99	70.439	ENSAPOG00000015131	trmt13	85	70.743	Acanthochromis_polyacanthus
ENSFHEG00000022954	trmt13	97	51.621	ENSAMEG00000008917	TRMT13	77	52.865	Ailuropoda_melanoleuca
ENSFHEG00000022954	trmt13	100	71.220	ENSACIG00000005804	trmt13	94	61.905	Amphilophus_citrinellus
ENSFHEG00000022954	trmt13	99	69.794	ENSAOCG00000023585	trmt13	85	68.794	Amphiprion_ocellaris
ENSFHEG00000022954	trmt13	99	70.252	ENSAPEG00000004025	trmt13	85	68.794	Amphiprion_percula
ENSFHEG00000022954	trmt13	99	71.675	ENSATEG00000006597	trmt13	81	72.351	Anabas_testudineus
ENSFHEG00000022954	trmt13	87	54.622	ENSAPLG00000014924	TRMT13	78	55.652	Anas_platyrhynchos
ENSFHEG00000022954	trmt13	97	55.860	ENSACAG00000003498	TRMT13	81	54.569	Anolis_carolinensis
ENSFHEG00000022954	trmt13	97	51.372	ENSANAG00000019525	TRMT13	83	57.778	Aotus_nancymaae
ENSFHEG00000022954	trmt13	100	72.127	ENSACLG00000020018	trmt13	82	72.441	Astatotilapia_calliptera
ENSFHEG00000022954	trmt13	96	56.122	ENSAMXG00000017963	trmt13	77	56.728	Astyanax_mexicanus
ENSFHEG00000022954	trmt13	97	51.117	ENSBTAG00000015781	TRMT13	77	52.332	Bos_taurus
ENSFHEG00000022954	trmt13	66	32.364	WBGene00013026	Y49A3A.3	67	32.364	Caenorhabditis_elegans
ENSFHEG00000022954	trmt13	97	50.623	ENSCJAG00000000200	TRMT13	89	61.940	Callithrix_jacchus
ENSFHEG00000022954	trmt13	59	52.174	ENSCAFG00000020021	TRMT13	69	52.174	Canis_familiaris
ENSFHEG00000022954	trmt13	64	55.894	ENSCAFG00020011572	TRMT13	90	55.894	Canis_lupus_dingo
ENSFHEG00000022954	trmt13	97	51.724	ENSCHIG00000015395	TRMT13	78	52.320	Capra_hircus
ENSFHEG00000022954	trmt13	94	53.728	ENSTSYG00000010811	TRMT13	98	57.000	Carlito_syrichta
ENSFHEG00000022954	trmt13	87	41.813	ENSCAPG00000009085	TRMT13	92	42.647	Cavia_aperea
ENSFHEG00000022954	trmt13	98	51.485	ENSCPOG00000000694	TRMT13	79	52.284	Cavia_porcellus
ENSFHEG00000022954	trmt13	97	51.621	ENSCCAG00000023772	TRMT13	83	56.667	Cebus_capucinus
ENSFHEG00000022954	trmt13	97	51.372	ENSCATG00000033556	TRMT13	83	58.889	Cercocebus_atys
ENSFHEG00000022954	trmt13	86	52.542	ENSCLAG00000008220	TRMT13	80	52.722	Chinchilla_lanigera
ENSFHEG00000022954	trmt13	97	51.500	ENSCSAG00000001506	TRMT13	78	51.928	Chlorocebus_sabaeus
ENSFHEG00000022954	trmt13	98	54.478	ENSCPBG00000026671	TRMT13	78	55.181	Chrysemys_picta_bellii
ENSFHEG00000022954	trmt13	97	51.122	ENSCANG00000034659	TRMT13	83	57.778	Colobus_angolensis_palliatus
ENSFHEG00000022954	trmt13	97	51.372	ENSCGRG00001021601	Trmt13	77	52.344	Cricetulus_griseus_chok1gshd
ENSFHEG00000022954	trmt13	99	67.164	ENSCSEG00000000591	trmt13	82	68.490	Cynoglossus_semilaevis
ENSFHEG00000022954	trmt13	100	78.708	ENSCVAG00000017342	trmt13	80	77.861	Cyprinodon_variegatus
ENSFHEG00000022954	trmt13	98	56.642	ENSDARG00000102846	trmt13	80	57.368	Danio_rerio
ENSFHEG00000022954	trmt13	64	54.682	ENSDNOG00000001710	TRMT13	80	54.682	Dasypus_novemcinctus
ENSFHEG00000022954	trmt13	98	51.365	ENSDORG00000015808	Trmt13	76	53.050	Dipodomys_ordii
ENSFHEG00000022954	trmt13	94	34.243	FBgn0037435	CG18048	80	34.243	Drosophila_melanogaster
ENSFHEG00000022954	trmt13	97	45.545	ENSETEG00000005819	TRMT13	80	44.332	Echinops_telfairi
ENSFHEG00000022954	trmt13	90	48.238	ENSEBUG00000014444	trmt13	82	46.234	Eptatretus_burgeri
ENSFHEG00000022954	trmt13	97	51.122	ENSEASG00005015918	TRMT13	78	51.282	Equus_asinus_asinus
ENSFHEG00000022954	trmt13	97	51.122	ENSECAG00000022626	TRMT13	78	51.282	Equus_caballus
ENSFHEG00000022954	trmt13	71	46.918	ENSEEUG00000000294	TRMT13	61	46.918	Erinaceus_europaeus
ENSFHEG00000022954	trmt13	96	57.761	ENSELUG00000003803	trmt13	82	57.252	Esox_lucius
ENSFHEG00000022954	trmt13	97	50.873	ENSFCAG00000030618	TRMT13	98	48.252	Felis_catus
ENSFHEG00000022954	trmt13	96	55.416	ENSFALG00000002424	TRMT13	77	55.906	Ficedula_albicollis
ENSFHEG00000022954	trmt13	98	51.238	ENSFDAG00000006342	TRMT13	77	52.344	Fukomys_damarensis
ENSFHEG00000022954	trmt13	90	59.890	ENSGMOG00000013223	trmt13	86	58.177	Gadus_morhua
ENSFHEG00000022954	trmt13	98	54.054	ENSGALG00000005290	TRMT13	78	56.959	Gallus_gallus
ENSFHEG00000022954	trmt13	96	71.178	ENSGAFG00000001577	trmt13	86	70.927	Gambusia_affinis
ENSFHEG00000022954	trmt13	100	70.905	ENSGACG00000013428	trmt13	82	71.756	Gasterosteus_aculeatus
ENSFHEG00000022954	trmt13	98	53.846	ENSGAGG00000023303	TRMT13	96	60.075	Gopherus_agassizii
ENSFHEG00000022954	trmt13	97	51.122	ENSGGOG00000005616	TRMT13	80	59.770	Gorilla_gorilla
ENSFHEG00000022954	trmt13	100	72.372	ENSHBUG00000007754	trmt13	83	72.441	Haplochromis_burtoni
ENSFHEG00000022954	trmt13	98	50.743	ENSHGLG00000002164	TRMT13	75	52.660	Heterocephalus_glaber_female
ENSFHEG00000022954	trmt13	98	50.743	ENSHGLG00100001618	TRMT13	75	52.660	Heterocephalus_glaber_male
ENSFHEG00000022954	trmt13	94	57.908	ENSHCOG00000020553	trmt13	84	58.355	Hippocampus_comes
ENSFHEG00000022954	trmt13	96	57.584	ENSIPUG00000024787	trmt13	89	58.397	Ictalurus_punctatus
ENSFHEG00000022954	trmt13	97	50.374	ENSSTOG00000013483	TRMT13	77	51.302	Ictidomys_tridecemlineatus
ENSFHEG00000022954	trmt13	97	50.739	ENSJJAG00000018012	Trmt13	79	51.414	Jaculus_jaculus
ENSFHEG00000022954	trmt13	65	72.000	ENSKMAG00000007639	trmt13	69	71.674	Kryptolebias_marmoratus
ENSFHEG00000022954	trmt13	99	71.359	ENSLBEG00000020238	trmt13	84	71.429	Labrus_bergylta
ENSFHEG00000022954	trmt13	99	53.186	ENSLACG00000013153	TRMT13	77	55.145	Latimeria_chalumnae
ENSFHEG00000022954	trmt13	100	55.854	ENSLOCG00000000418	trmt13	80	56.091	Lepisosteus_oculatus
ENSFHEG00000022954	trmt13	77	52.131	ENSLAFG00000002383	TRMT13	74	52.595	Loxodonta_africana
ENSFHEG00000022954	trmt13	97	51.621	ENSMFAG00000034681	TRMT13	83	57.778	Macaca_fascicularis
ENSFHEG00000022954	trmt13	97	51.621	ENSMMUG00000004243	TRMT13	83	57.778	Macaca_mulatta
ENSFHEG00000022954	trmt13	97	51.621	ENSMNEG00000036102	TRMT13	83	57.778	Macaca_nemestrina
ENSFHEG00000022954	trmt13	97	51.122	ENSMLEG00000034258	TRMT13	83	57.778	Mandrillus_leucophaeus
ENSFHEG00000022954	trmt13	99	71.429	ENSMAMG00000016597	trmt13	81	71.722	Mastacembelus_armatus
ENSFHEG00000022954	trmt13	100	71.883	ENSMZEG00005020959	trmt13	82	72.178	Maylandia_zebra
ENSFHEG00000022954	trmt13	87	55.587	ENSMGAG00000006970	TRMT13	78	56.268	Meleagris_gallopavo
ENSFHEG00000022954	trmt13	97	50.868	ENSMAUG00000010448	Trmt13	77	51.554	Mesocricetus_auratus
ENSFHEG00000022954	trmt13	97	52.369	ENSMICG00000005283	TRMT13	96	47.857	Microcebus_murinus
ENSFHEG00000022954	trmt13	97	50.249	ENSMOCG00000019914	Trmt13	78	51.429	Microtus_ochrogaster
ENSFHEG00000022954	trmt13	63	69.841	ENSMMOG00000007762	trmt13	90	69.841	Mola_mola
ENSFHEG00000022954	trmt13	99	50.488	ENSMODG00000003646	TRMT13	78	52.442	Monodelphis_domestica
ENSFHEG00000022954	trmt13	100	67.073	ENSMALG00000020965	trmt13	90	63.559	Monopterus_albus
ENSFHEG00000022954	trmt13	98	52.605	MGP_CAROLIEiJ_G0025568	Trmt13	100	52.778	Mus_caroli
ENSFHEG00000022954	trmt13	98	52.357	ENSMUSG00000033439	Trmt13	98	51.667	Mus_musculus
ENSFHEG00000022954	trmt13	98	52.109	MGP_PahariEiJ_G0027014	Trmt13	98	50.820	Mus_pahari
ENSFHEG00000022954	trmt13	98	52.357	MGP_SPRETEiJ_G0026518	Trmt13	98	51.667	Mus_spretus
ENSFHEG00000022954	trmt13	77	50.492	ENSMPUG00000002078	-	75	51.736	Mustela_putorius_furo
ENSFHEG00000022954	trmt13	97	51.250	ENSMLUG00000002124	TRMT13	77	51.823	Myotis_lucifugus
ENSFHEG00000022954	trmt13	100	66.259	ENSNBRG00000006783	trmt13	80	66.142	Neolamprologus_brichardi
ENSFHEG00000022954	trmt13	97	50.873	ENSNLEG00000035917	TRMT13	83	57.778	Nomascus_leucogenys
ENSFHEG00000022954	trmt13	58	48.954	ENSMEUG00000013346	-	94	48.945	Notamacropus_eugenii
ENSFHEG00000022954	trmt13	64	55.513	ENSOPRG00000012048	TRMT13	54	55.513	Ochotona_princeps
ENSFHEG00000022954	trmt13	100	73.105	ENSONIG00000004574	trmt13	84	72.539	Oreochromis_niloticus
ENSFHEG00000022954	trmt13	85	54.318	ENSOANG00000012057	TRMT13	77	54.190	Ornithorhynchus_anatinus
ENSFHEG00000022954	trmt13	97	51.378	ENSOCUG00000023095	TRMT13	80	51.399	Oryctolagus_cuniculus
ENSFHEG00000022954	trmt13	99	63.235	ENSORLG00000003320	trmt13	82	64.824	Oryzias_latipes
ENSFHEG00000022954	trmt13	99	65.441	ENSORLG00020005972	trmt13	82	65.903	Oryzias_latipes_hni
ENSFHEG00000022954	trmt13	99	71.744	ENSORLG00015002270	trmt13	83	72.449	Oryzias_latipes_hsok
ENSFHEG00000022954	trmt13	96	73.165	ENSOMEG00000006724	trmt13	80	72.312	Oryzias_melastigma
ENSFHEG00000022954	trmt13	97	51.117	ENSOGAG00000005618	TRMT13	75	52.208	Otolemur_garnettii
ENSFHEG00000022954	trmt13	97	51.724	ENSOARG00000017983	TRMT13	78	52.320	Ovis_aries
ENSFHEG00000022954	trmt13	97	51.122	ENSPPAG00000043736	TRMT13	83	57.778	Pan_paniscus
ENSFHEG00000022954	trmt13	97	50.873	ENSPPRG00000003424	TRMT13	98	48.252	Panthera_pardus
ENSFHEG00000022954	trmt13	97	50.873	ENSPTIG00000018598	TRMT13	98	48.252	Panthera_tigris_altaica
ENSFHEG00000022954	trmt13	97	51.122	ENSPTRG00000001001	TRMT13	83	57.778	Pan_troglodytes
ENSFHEG00000022954	trmt13	97	51.122	ENSPANG00000007598	TRMT13	90	51.538	Papio_anubis
ENSFHEG00000022954	trmt13	99	56.436	ENSPKIG00000001514	trmt13	79	58.511	Paramormyrops_kingsleyae
ENSFHEG00000022954	trmt13	93	53.230	ENSPSIG00000012703	TRMT13	85	54.743	Pelodiscus_sinensis
ENSFHEG00000022954	trmt13	99	63.092	ENSPMGG00000013298	trmt13	79	63.010	Periophthalmus_magnuspinnatus
ENSFHEG00000022954	trmt13	97	51.372	ENSPEMG00000000275	Trmt13	77	51.042	Peromyscus_maniculatus_bairdii
ENSFHEG00000022954	trmt13	99	48.941	ENSPMAG00000000823	trmt13	77	50.000	Petromyzon_marinus
ENSFHEG00000022954	trmt13	97	52.346	ENSPCIG00000007699	TRMT13	76	54.211	Phascolarctos_cinereus
ENSFHEG00000022954	trmt13	99	73.267	ENSPFOG00000008675	trmt13	79	73.522	Poecilia_formosa
ENSFHEG00000022954	trmt13	99	73.188	ENSPLAG00000009709	trmt13	84	73.434	Poecilia_latipinna
ENSFHEG00000022954	trmt13	99	72.464	ENSPMEG00000022954	trmt13	84	72.431	Poecilia_mexicana
ENSFHEG00000022954	trmt13	99	70.813	ENSPREG00000005645	trmt13	93	73.050	Poecilia_reticulata
ENSFHEG00000022954	trmt13	96	51.256	ENSPPYG00000001120	TRMT13	78	51.680	Pongo_abelii
ENSFHEG00000022954	trmt13	96	51.629	ENSPCAG00000002340	TRMT13	77	52.356	Procavia_capensis
ENSFHEG00000022954	trmt13	97	51.621	ENSPCOG00000017984	TRMT13	83	56.667	Propithecus_coquereli
ENSFHEG00000022954	trmt13	97	51.000	ENSPVAG00000017430	TRMT13	77	51.958	Pteropus_vampyrus
ENSFHEG00000022954	trmt13	100	72.494	ENSPNYG00000013690	trmt13	82	72.853	Pundamilia_nyererei
ENSFHEG00000022954	trmt13	99	53.808	ENSPNAG00000022130	trmt13	78	56.684	Pygocentrus_nattereri
ENSFHEG00000022954	trmt13	98	52.488	ENSRNOG00000015140	Trmt13	75	52.865	Rattus_norvegicus
ENSFHEG00000022954	trmt13	97	51.122	ENSRBIG00000037686	TRMT13	83	57.778	Rhinopithecus_bieti
ENSFHEG00000022954	trmt13	97	52.243	ENSRROG00000044057	TRMT13	83	57.778	Rhinopithecus_roxellana
ENSFHEG00000022954	trmt13	97	51.372	ENSSBOG00000026541	TRMT13	83	57.778	Saimiri_boliviensis_boliviensis
ENSFHEG00000022954	trmt13	89	51.366	ENSSHAG00000005213	TRMT13	74	53.488	Sarcophilus_harrisii
ENSFHEG00000022954	trmt13	93	58.594	ENSSFOG00015017560	trmt13	80	58.163	Scleropages_formosus
ENSFHEG00000022954	trmt13	100	69.438	ENSSMAG00000014592	trmt13	81	68.702	Scophthalmus_maximus
ENSFHEG00000022954	trmt13	100	73.671	ENSSDUG00000015508	trmt13	81	73.980	Seriola_dumerili
ENSFHEG00000022954	trmt13	100	73.913	ENSSLDG00000019060	trmt13	81	74.046	Seriola_lalandi_dorsalis
ENSFHEG00000022954	trmt13	98	45.610	ENSSARG00000010344	TRMT13	81	45.614	Sorex_araneus
ENSFHEG00000022954	trmt13	97	53.250	ENSSPUG00000016339	TRMT13	79	54.233	Sphenodon_punctatus
ENSFHEG00000022954	trmt13	99	73.464	ENSSPAG00000011922	trmt13	83	73.096	Stegastes_partitus
ENSFHEG00000022954	trmt13	97	52.632	ENSSSCG00000006869	TRMT13	76	53.719	Sus_scrofa
ENSFHEG00000022954	trmt13	97	55.890	ENSTGUG00000005253	TRMT13	82	55.471	Taeniopygia_guttata
ENSFHEG00000022954	trmt13	99	63.462	ENSTRUG00000008400	trmt13	77	66.223	Takifugu_rubripes
ENSFHEG00000022954	trmt13	65	48.765	ENSTBEG00000008911	TRMT13	54	60.000	Tupaia_belangeri
ENSFHEG00000022954	trmt13	60	62.162	ENSTTRG00000015302	-	52	62.162	Tursiops_truncatus
ENSFHEG00000022954	trmt13	97	50.131	ENSUAMG00000017251	TRMT13	76	51.366	Ursus_americanus
ENSFHEG00000022954	trmt13	97	51.621	ENSUMAG00000007901	TRMT13	78	52.707	Ursus_maritimus
ENSFHEG00000022954	trmt13	68	75.758	ENSVPAG00000001034	TRMT13	59	75.758	Vicugna_pacos
ENSFHEG00000022954	trmt13	93	52.083	ENSVVUG00000021996	TRMT13	77	52.083	Vulpes_vulpes
ENSFHEG00000022954	trmt13	99	51.870	ENSXETG00000013204	trmt13	78	54.011	Xenopus_tropicalis
ENSFHEG00000022954	trmt13	98	71.324	ENSXMAG00000010765	trmt13	84	71.178	Xiphophorus_maculatus