EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSFHEG00000022997 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 52456 bases
Position: chrKN805809.1:262235-314690
Accession: 105917927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000034835	Suf	PF05843.14	3.8e-13	1	1
ENSFHEP00000034870	Suf	PF05843.14	1.2e-09	1	1
ENSFHEP00000034870	S1	PF00575.23	3.2e-39	1	2
ENSFHEP00000034870	S1	PF00575.23	3.2e-39	2	2
ENSFHEP00000034835	S1	PF00575.23	2.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000035379	-	4614	-	ENSFHEP00000034835	1537 (aa)	-	-
ENSFHET00000030484	-	5310	XM_021310793	ENSFHEP00000034870	1769 (aa)	XP_021166468	-

Gene Model

Click here to download ENSFHEG00000022997's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000022997's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000022997	pdcd11	96	67.458	ENSG00000148843	PDCD11	91	67.458	Homo_sapiens
ENSFHEG00000022997	pdcd11	96	90.789	ENSAPOG00000015629	pdcd11	89	90.789	Acanthochromis_polyacanthus
ENSFHEG00000022997	pdcd11	95	67.119	ENSAMEG00000017935	PDCD11	88	67.119	Ailuropoda_melanoleuca
ENSFHEG00000022997	pdcd11	53	59.035	ENSACIG00000006458	-	97	59.060	Amphilophus_citrinellus
ENSFHEG00000022997	pdcd11	96	91.447	ENSAOCG00000015287	pdcd11	89	91.447	Amphiprion_ocellaris
ENSFHEG00000022997	pdcd11	58	59.801	ENSAPEG00000020240	pdcd11	98	60.539	Amphiprion_percula
ENSFHEG00000022997	pdcd11	95	90.759	ENSATEG00000021043	pdcd11	89	90.759	Anabas_testudineus
ENSFHEG00000022997	pdcd11	96	64.120	ENSAPLG00000010301	PDCD11	99	64.120	Anas_platyrhynchos
ENSFHEG00000022997	pdcd11	96	68.512	ENSACAG00000004796	PDCD11	91	67.003	Anolis_carolinensis
ENSFHEG00000022997	pdcd11	97	63.580	ENSANAG00000034576	PDCD11	90	63.580	Aotus_nancymaae
ENSFHEG00000022997	pdcd11	95	89.000	ENSACLG00000018236	pdcd11	99	81.034	Astatotilapia_calliptera
ENSFHEG00000022997	pdcd11	87	77.926	ENSAMXG00000005458	pdcd11	90	77.926	Astyanax_mexicanus
ENSFHEG00000022997	pdcd11	96	66.554	ENSBTAG00000009715	PDCD11	88	66.554	Bos_taurus
ENSFHEG00000022997	pdcd11	96	66.892	ENSCJAG00000018257	PDCD11	88	66.892	Callithrix_jacchus
ENSFHEG00000022997	pdcd11	96	67.568	ENSCAFG00000010411	PDCD11	89	67.568	Canis_familiaris
ENSFHEG00000022997	pdcd11	97	67.568	ENSCAFG00020010369	PDCD11	90	67.568	Canis_lupus_dingo
ENSFHEG00000022997	pdcd11	96	66.216	ENSCHIG00000025218	PDCD11	88	66.216	Capra_hircus
ENSFHEG00000022997	pdcd11	95	65.541	ENSTSYG00000033423	PDCD11	91	65.541	Carlito_syrichta
ENSFHEG00000022997	pdcd11	87	66.777	ENSCAPG00000005386	PDCD11	99	66.777	Cavia_aperea
ENSFHEG00000022997	pdcd11	96	66.777	ENSCPOG00000010957	PDCD11	89	66.777	Cavia_porcellus
ENSFHEG00000022997	pdcd11	96	66.554	ENSCCAG00000018950	PDCD11	89	66.554	Cebus_capucinus
ENSFHEG00000022997	pdcd11	96	67.230	ENSCATG00000044331	PDCD11	88	67.230	Cercocebus_atys
ENSFHEG00000022997	pdcd11	96	67.230	ENSCLAG00000001029	PDCD11	89	67.230	Chinchilla_lanigera
ENSFHEG00000022997	pdcd11	96	67.230	ENSCSAG00000005346	PDCD11	89	67.230	Chlorocebus_sabaeus
ENSFHEG00000022997	pdcd11	67	72.093	ENSCHOG00000004796	PDCD11	74	72.093	Choloepus_hoffmanni
ENSFHEG00000022997	pdcd11	94	67.616	ENSCPBG00000024487	PDCD11	97	65.878	Chrysemys_picta_bellii
ENSFHEG00000022997	pdcd11	77	43.726	ENSCING00000002715	-	69	32.422	Ciona_intestinalis
ENSFHEG00000022997	pdcd11	96	67.230	ENSCANG00000043300	PDCD11	88	67.230	Colobus_angolensis_palliatus
ENSFHEG00000022997	pdcd11	93	67.606	ENSCGRG00001006458	Pdcd11	85	66.554	Cricetulus_griseus_chok1gshd
ENSFHEG00000022997	pdcd11	93	67.254	ENSCGRG00000003583	Pdcd11	85	65.993	Cricetulus_griseus_crigri
ENSFHEG00000022997	pdcd11	92	83.071	ENSCSEG00000010739	pdcd11	89	83.071	Cynoglossus_semilaevis
ENSFHEG00000022997	pdcd11	96	92.434	ENSCVAG00000018903	pdcd11	90	92.434	Cyprinodon_variegatus
ENSFHEG00000022997	pdcd11	96	75.329	ENSDARG00000052480	pdcd11	88	75.329	Danio_rerio
ENSFHEG00000022997	pdcd11	96	67.568	ENSDNOG00000013838	PDCD11	88	67.568	Dasypus_novemcinctus
ENSFHEG00000022997	pdcd11	95	66.892	ENSDORG00000010420	Pdcd11	89	66.892	Dipodomys_ordii
ENSFHEG00000022997	pdcd11	50	35.254	FBgn0039182	CG5728	59	33.807	Drosophila_melanogaster
ENSFHEG00000022997	pdcd11	80	67.213	ENSETEG00000000813	PDCD11	74	67.213	Echinops_telfairi
ENSFHEG00000022997	pdcd11	68	50.685	ENSEBUG00000002358	-	79	50.685	Eptatretus_burgeri
ENSFHEG00000022997	pdcd11	90	67.958	ENSEASG00005015159	PDCD11	99	67.230	Equus_asinus_asinus
ENSFHEG00000022997	pdcd11	95	68.056	ENSECAG00000020507	PDCD11	99	67.230	Equus_caballus
ENSFHEG00000022997	pdcd11	84	64.474	ENSEEUG00000009245	PDCD11	77	64.474	Erinaceus_europaeus
ENSFHEG00000022997	pdcd11	95	79.934	ENSELUG00000004211	pdcd11	89	79.934	Esox_lucius
ENSFHEG00000022997	pdcd11	96	66.443	ENSFCAG00000002384	PDCD11	88	66.443	Felis_catus
ENSFHEG00000022997	pdcd11	94	69.343	ENSFALG00000008775	PDCD11	99	66.554	Ficedula_albicollis
ENSFHEG00000022997	pdcd11	97	63.889	ENSFDAG00000009532	PDCD11	88	67.110	Fukomys_damarensis
ENSFHEG00000022997	pdcd11	87	78.873	ENSGMOG00000004186	pdcd11	83	76.898	Gadus_morhua
ENSFHEG00000022997	pdcd11	73	45.089	ENSGALG00000008265	PDCD11	91	45.089	Gallus_gallus
ENSFHEG00000022997	pdcd11	96	90.301	ENSGAFG00000012806	pdcd11	88	90.301	Gambusia_affinis
ENSFHEG00000022997	pdcd11	96	86.645	ENSGACG00000018233	pdcd11	97	82.152	Gasterosteus_aculeatus
ENSFHEG00000022997	pdcd11	86	66.192	ENSGAGG00000024314	PDCD11	83	64.527	Gopherus_agassizii
ENSFHEG00000022997	pdcd11	96	67.230	ENSGGOG00000011621	PDCD11	91	67.230	Gorilla_gorilla
ENSFHEG00000022997	pdcd11	95	89.369	ENSHBUG00000020226	pdcd11	90	89.369	Haplochromis_burtoni
ENSFHEG00000022997	pdcd11	95	65.878	ENSHGLG00000001462	PDCD11	88	65.878	Heterocephalus_glaber_female
ENSFHEG00000022997	pdcd11	95	62.162	ENSHGLG00100018779	PDCD11	88	62.162	Heterocephalus_glaber_male
ENSFHEG00000022997	pdcd11	96	87.622	ENSHCOG00000016006	pdcd11	90	87.622	Hippocampus_comes
ENSFHEG00000022997	pdcd11	63	45.662	ENSIPUG00000015102	pdcd11	97	45.524	Ictalurus_punctatus
ENSFHEG00000022997	pdcd11	94	67.230	ENSSTOG00000014553	PDCD11	88	67.230	Ictidomys_tridecemlineatus
ENSFHEG00000022997	pdcd11	95	67.986	ENSJJAG00000015523	Pdcd11	89	67.230	Jaculus_jaculus
ENSFHEG00000022997	pdcd11	53	57.860	ENSKMAG00000021182	pdcd11	97	57.697	Kryptolebias_marmoratus
ENSFHEG00000022997	pdcd11	50	56.332	ENSLBEG00000009990	-	98	56.208	Labrus_bergylta
ENSFHEG00000022997	pdcd11	94	69.718	ENSLOCG00000011818	pdcd11	90	69.204	Lepisosteus_oculatus
ENSFHEG00000022997	pdcd11	96	67.491	ENSLAFG00000008398	PDCD11	90	67.491	Loxodonta_africana
ENSFHEG00000022997	pdcd11	96	66.892	ENSMFAG00000044058	PDCD11	88	66.892	Macaca_fascicularis
ENSFHEG00000022997	pdcd11	96	67.230	ENSMMUG00000007058	PDCD11	88	67.230	Macaca_mulatta
ENSFHEG00000022997	pdcd11	96	67.230	ENSMNEG00000040726	PDCD11	88	67.230	Macaca_nemestrina
ENSFHEG00000022997	pdcd11	96	67.230	ENSMLEG00000040978	PDCD11	90	67.230	Mandrillus_leucophaeus
ENSFHEG00000022997	pdcd11	96	89.474	ENSMAMG00000009572	pdcd11	89	89.474	Mastacembelus_armatus
ENSFHEG00000022997	pdcd11	95	89.701	ENSMZEG00005008949	pdcd11	90	89.701	Maylandia_zebra
ENSFHEG00000022997	pdcd11	94	68.613	ENSMGAG00000010482	PDCD11	89	65.116	Meleagris_gallopavo
ENSFHEG00000022997	pdcd11	81	67.958	ENSMAUG00000014924	Pdcd11	80	66.892	Mesocricetus_auratus
ENSFHEG00000022997	pdcd11	97	67.568	ENSMICG00000012421	PDCD11	89	67.568	Microcebus_murinus
ENSFHEG00000022997	pdcd11	93	67.958	ENSMOCG00000021792	Pdcd11	88	66.892	Microtus_ochrogaster
ENSFHEG00000022997	pdcd11	95	81.063	ENSMMOG00000007572	pdcd11	89	80.795	Mola_mola
ENSFHEG00000022997	pdcd11	83	67.568	ENSMODG00000011077	PDCD11	75	67.568	Monodelphis_domestica
ENSFHEG00000022997	pdcd11	92	82.895	ENSMALG00000003859	pdcd11	90	82.895	Monopterus_albus
ENSFHEG00000022997	pdcd11	99	66.901	MGP_CAROLIEiJ_G0023050	Pdcd11	94	66.216	Mus_caroli
ENSFHEG00000022997	pdcd11	99	66.901	ENSMUSG00000025047	Pdcd11	94	65.878	Mus_musculus
ENSFHEG00000022997	pdcd11	99	67.958	MGP_PahariEiJ_G0014540	Pdcd11	94	66.892	Mus_pahari
ENSFHEG00000022997	pdcd11	99	66.901	MGP_SPRETEiJ_G0023971	Pdcd11	94	65.878	Mus_spretus
ENSFHEG00000022997	pdcd11	98	67.905	ENSMPUG00000016829	PDCD11	89	67.905	Mustela_putorius_furo
ENSFHEG00000022997	pdcd11	95	67.958	ENSMLUG00000004997	PDCD11	88	67.230	Myotis_lucifugus
ENSFHEG00000022997	pdcd11	96	67.230	ENSNGAG00000018143	Pdcd11	88	67.230	Nannospalax_galili
ENSFHEG00000022997	pdcd11	83	90.367	ENSNBRG00000021596	pdcd11	97	75.072	Neolamprologus_brichardi
ENSFHEG00000022997	pdcd11	96	66.892	ENSNLEG00000026700	PDCD11	88	66.892	Nomascus_leucogenys
ENSFHEG00000022997	pdcd11	66	68.000	ENSMEUG00000013719	-	52	67.699	Notamacropus_eugenii
ENSFHEG00000022997	pdcd11	96	66.102	ENSOPRG00000010593	PDCD11	84	66.102	Ochotona_princeps
ENSFHEG00000022997	pdcd11	95	66.327	ENSODEG00000008079	PDCD11	88	66.327	Octodon_degus
ENSFHEG00000022997	pdcd11	95	89.701	ENSONIG00000018835	pdcd11	90	89.701	Oreochromis_niloticus
ENSFHEG00000022997	pdcd11	94	66.901	ENSOANG00000001636	-	89	65.878	Ornithorhynchus_anatinus
ENSFHEG00000022997	pdcd11	98	66.554	ENSOCUG00000006312	PDCD11	89	66.554	Oryctolagus_cuniculus
ENSFHEG00000022997	pdcd11	92	86.424	ENSORLG00020003642	pdcd11	96	86.424	Oryzias_latipes_hni
ENSFHEG00000022997	pdcd11	92	86.424	ENSORLG00015001618	pdcd11	96	86.424	Oryzias_latipes_hsok
ENSFHEG00000022997	pdcd11	59	87.960	ENSOMEG00000010904	pdcd11	82	87.960	Oryzias_melastigma
ENSFHEG00000022997	pdcd11	95	67.986	ENSOGAG00000008683	PDCD11	89	66.554	Otolemur_garnettii
ENSFHEG00000022997	pdcd11	96	66.216	ENSOARG00000003719	PDCD11	88	66.216	Ovis_aries
ENSFHEG00000022997	pdcd11	96	67.458	ENSPPAG00000024593	PDCD11	91	67.458	Pan_paniscus
ENSFHEG00000022997	pdcd11	97	65.132	ENSPPRG00000015133	PDCD11	89	65.132	Panthera_pardus
ENSFHEG00000022997	pdcd11	96	66.443	ENSPTIG00000011433	PDCD11	89	66.443	Panthera_tigris_altaica
ENSFHEG00000022997	pdcd11	96	67.458	ENSPTRG00000002911	PDCD11	91	67.458	Pan_troglodytes
ENSFHEG00000022997	pdcd11	96	67.230	ENSPANG00000020959	PDCD11	88	67.230	Papio_anubis
ENSFHEG00000022997	pdcd11	92	75.254	ENSPKIG00000000973	pdcd11	85	74.671	Paramormyrops_kingsleyae
ENSFHEG00000022997	pdcd11	74	42.248	ENSPSIG00000005102	PDCD11	87	43.363	Pelodiscus_sinensis
ENSFHEG00000022997	pdcd11	78	85.855	ENSPMGG00000007289	pdcd11	100	82.462	Periophthalmus_magnuspinnatus
ENSFHEG00000022997	pdcd11	93	67.254	ENSPEMG00000010315	Pdcd11	88	66.216	Peromyscus_maniculatus_bairdii
ENSFHEG00000022997	pdcd11	95	60.606	ENSPMAG00000003098	pdcd11	88	60.201	Petromyzon_marinus
ENSFHEG00000022997	pdcd11	95	66.901	ENSPCIG00000001118	PDCD11	87	66.216	Phascolarctos_cinereus
ENSFHEG00000022997	pdcd11	96	92.434	ENSPFOG00000006012	pdcd11	89	92.434	Poecilia_formosa
ENSFHEG00000022997	pdcd11	96	92.434	ENSPLAG00000014494	pdcd11	89	92.434	Poecilia_latipinna
ENSFHEG00000022997	pdcd11	93	91.776	ENSPMEG00000018177	pdcd11	98	83.476	Poecilia_mexicana
ENSFHEG00000022997	pdcd11	96	91.118	ENSPREG00000000475	pdcd11	90	91.118	Poecilia_reticulata
ENSFHEG00000022997	pdcd11	96	66.892	ENSPPYG00000002621	PDCD11	88	66.892	Pongo_abelii
ENSFHEG00000022997	pdcd11	58	65.878	ENSPCAG00000011663	PDCD11	64	55.020	Procavia_capensis
ENSFHEG00000022997	pdcd11	77	67.340	ENSPCOG00000023327	PDCD11	78	67.340	Propithecus_coquereli
ENSFHEG00000022997	pdcd11	94	66.216	ENSPVAG00000004176	PDCD11	84	66.216	Pteropus_vampyrus
ENSFHEG00000022997	pdcd11	95	89.701	ENSPNYG00000003979	pdcd11	90	89.701	Pundamilia_nyererei
ENSFHEG00000022997	pdcd11	90	77.303	ENSPNAG00000017225	pdcd11	89	77.303	Pygocentrus_nattereri
ENSFHEG00000022997	pdcd11	95	67.958	ENSRNOG00000020304	Pdcd11	88	66.892	Rattus_norvegicus
ENSFHEG00000022997	pdcd11	96	66.892	ENSRBIG00000011889	PDCD11	88	66.892	Rhinopithecus_bieti
ENSFHEG00000022997	pdcd11	96	67.230	ENSRROG00000030483	PDCD11	88	67.230	Rhinopithecus_roxellana
ENSFHEG00000022997	pdcd11	60	46.097	YMR229C	-	81	32.227	Saccharomyces_cerevisiae
ENSFHEG00000022997	pdcd11	96	67.568	ENSSBOG00000030308	PDCD11	88	67.568	Saimiri_boliviensis_boliviensis
ENSFHEG00000022997	pdcd11	95	65.263	ENSSHAG00000018258	PDCD11	89	64.646	Sarcophilus_harrisii
ENSFHEG00000022997	pdcd11	97	74.671	ENSSFOG00015003881	pdcd11	92	74.671	Scleropages_formosus
ENSFHEG00000022997	pdcd11	96	90.461	ENSSMAG00000006612	pdcd11	89	90.461	Scophthalmus_maximus
ENSFHEG00000022997	pdcd11	89	91.216	ENSSDUG00000021302	pdcd11	87	91.216	Seriola_dumerili
ENSFHEG00000022997	pdcd11	51	59.139	ENSSLDG00000010228	pdcd11	98	59.468	Seriola_lalandi_dorsalis
ENSFHEG00000022997	pdcd11	71	67.347	ENSSARG00000002540	PDCD11	58	67.347	Sorex_araneus
ENSFHEG00000022997	pdcd11	92	88.710	ENSSPAG00000017558	pdcd11	89	88.710	Stegastes_partitus
ENSFHEG00000022997	pdcd11	96	67.230	ENSSSCG00000010599	PDCD11	88	67.230	Sus_scrofa
ENSFHEG00000022997	pdcd11	72	54.488	ENSTRUG00000014291	pdcd11	100	54.552	Takifugu_rubripes
ENSFHEG00000022997	pdcd11	95	84.818	ENSTNIG00000012085	pdcd11	89	84.818	Tetraodon_nigroviridis
ENSFHEG00000022997	pdcd11	94	65.398	ENSTBEG00000001893	PDCD11	93	62.463	Tupaia_belangeri
ENSFHEG00000022997	pdcd11	96	66.892	ENSTTRG00000003356	PDCD11	81	66.892	Tursiops_truncatus
ENSFHEG00000022997	pdcd11	96	67.568	ENSUAMG00000018015	PDCD11	89	67.568	Ursus_americanus
ENSFHEG00000022997	pdcd11	98	67.568	ENSUMAG00000023567	PDCD11	90	67.568	Ursus_maritimus
ENSFHEG00000022997	pdcd11	56	52.222	ENSVPAG00000007405	PDCD11	63	52.222	Vicugna_pacos
ENSFHEG00000022997	pdcd11	96	67.568	ENSVVUG00000004457	PDCD11	89	67.568	Vulpes_vulpes
ENSFHEG00000022997	pdcd11	95	68.966	ENSXETG00000009482	pdcd11	88	68.000	Xenopus_tropicalis
ENSFHEG00000022997	pdcd11	87	92.273	ENSXCOG00000012420	pdcd11	84	92.273	Xiphophorus_couchianus
ENSFHEG00000022997	pdcd11	96	92.105	ENSXMAG00000004638	pdcd11	89	92.105	Xiphophorus_maculatus