EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000023065 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Plus strand
Length: 4309 bases
Position: chrKN811481.1:947876-952184
Accession: 105936400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000035037	RRM_1	PF00076.22	1.2e-30	1	2
ENSFHEP00000035037	RRM_1	PF00076.22	1.2e-30	2	2
ENSFHEP00000035027	RRM_1	PF00076.22	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000030756	-	1008	XM_012877238	ENSFHEP00000035037	335 (aa)	XP_012732692	-
ENSFHET00000035506	-	1967	-	ENSFHEP00000035027	242 (aa)	-	-

Gene Model

Click here to download ENSFHEG00000023065's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000023065's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000023065	srsf6a	50	43.605	ENSFHEG00000017425	-	87	45.930
ENSFHEG00000023065	srsf6a	73	50.376	ENSFHEG00000003955	srsf5a	95	57.343
ENSFHEG00000023065	srsf6a	50	43.023	ENSFHEG00000003174	srsf1a	69	44.186
ENSFHEG00000023065	srsf6a	53	40.625	ENSFHEG00000020851	srsf9	73	38.421
ENSFHEG00000023065	srsf6a	54	74.194	ENSFHEG00000007472	srsf4	82	81.579

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000023065	srsf6a	55	87.500	ENSG00000124193	SRSF6	87	71.148	Homo_sapiens
ENSFHEG00000023065	srsf6a	90	78.995	ENSAPOG00000000810	srsf6a	92	79.091	Acanthochromis_polyacanthus
ENSFHEG00000023065	srsf6a	55	71.892	ENSAMEG00000003710	SRSF6	87	60.855	Ailuropoda_melanoleuca
ENSFHEG00000023065	srsf6a	74	73.092	ENSACIG00000020091	-	95	81.890	Amphilophus_citrinellus
ENSFHEG00000023065	srsf6a	92	85.761	ENSACIG00000023658	-	91	85.484	Amphilophus_citrinellus
ENSFHEG00000023065	srsf6a	90	71.818	ENSAOCG00000019410	-	91	62.896	Amphiprion_ocellaris
ENSFHEG00000023065	srsf6a	54	85.714	ENSAOCG00000004309	-	98	66.879	Amphiprion_ocellaris
ENSFHEG00000023065	srsf6a	91	63.182	ENSAPEG00000013086	-	94	81.459	Amphiprion_percula
ENSFHEG00000023065	srsf6a	56	82.632	ENSAPEG00000020746	-	65	83.152	Amphiprion_percula
ENSFHEG00000023065	srsf6a	54	83.152	ENSATEG00000007255	-	71	81.421	Anabas_testudineus
ENSFHEG00000023065	srsf6a	54	86.813	ENSACAG00000002061	SRSF6	86	69.967	Anolis_carolinensis
ENSFHEG00000023065	srsf6a	55	87.500	ENSANAG00000024080	SRSF6	89	70.418	Aotus_nancymaae
ENSFHEG00000023065	srsf6a	54	86.022	ENSAMXG00000042692	-	96	85.926	Astyanax_mexicanus
ENSFHEG00000023065	srsf6a	55	87.500	ENSBTAG00000008527	SRSF6	87	71.053	Bos_taurus
ENSFHEG00000023065	srsf6a	55	87.500	ENSCJAG00000048403	SRSF6	68	88.525	Callithrix_jacchus
ENSFHEG00000023065	srsf6a	55	87.500	ENSCAFG00000009289	SRSF6	87	70.957	Canis_familiaris
ENSFHEG00000023065	srsf6a	55	87.500	ENSCAFG00020013559	SRSF6	87	70.957	Canis_lupus_dingo
ENSFHEG00000023065	srsf6a	55	87.500	ENSCHIG00000009148	-	87	71.053	Capra_hircus
ENSFHEG00000023065	srsf6a	55	87.500	ENSCHIG00000015890	-	87	71.053	Capra_hircus
ENSFHEG00000023065	srsf6a	55	66.120	ENSTSYG00000026476	SRSF6	85	56.579	Carlito_syrichta
ENSFHEG00000023065	srsf6a	55	82.065	ENSCPOG00000011761	SRSF6	87	65.232	Cavia_porcellus
ENSFHEG00000023065	srsf6a	55	87.500	ENSCCAG00000026018	-	89	70.418	Cebus_capucinus
ENSFHEG00000023065	srsf6a	55	76.757	ENSCCAG00000018540	-	98	58.075	Cebus_capucinus
ENSFHEG00000023065	srsf6a	55	87.500	ENSCATG00000030794	SRSF6	87	71.148	Cercocebus_atys
ENSFHEG00000023065	srsf6a	55	87.500	ENSCLAG00000010247	SRSF6	88	70.724	Chinchilla_lanigera
ENSFHEG00000023065	srsf6a	55	87.500	ENSCSAG00000014022	SRSF6	87	71.148	Chlorocebus_sabaeus
ENSFHEG00000023065	srsf6a	55	85.561	ENSCPBG00000018200	SRSF6	90	71.019	Chrysemys_picta_bellii
ENSFHEG00000023065	srsf6a	55	86.413	ENSCANG00000037774	-	87	70.164	Colobus_angolensis_palliatus
ENSFHEG00000023065	srsf6a	55	66.120	ENSCANG00000042529	-	85	56.393	Colobus_angolensis_palliatus
ENSFHEG00000023065	srsf6a	55	87.500	ENSCGRG00001022339	Srsf6	88	71.287	Cricetulus_griseus_chok1gshd
ENSFHEG00000023065	srsf6a	90	68.778	ENSCSEG00000019782	SRSF6	91	62.100	Cynoglossus_semilaevis
ENSFHEG00000023065	srsf6a	54	87.701	ENSDARG00000016783	srsf6b	82	93.590	Danio_rerio
ENSFHEG00000023065	srsf6a	54	79.121	ENSDARG00000013729	srsf6a	92	59.259	Danio_rerio
ENSFHEG00000023065	srsf6a	55	87.500	ENSDNOG00000008410	SRSF6	87	70.724	Dasypus_novemcinctus
ENSFHEG00000023065	srsf6a	55	87.500	ENSDORG00000028378	Srsf6	88	70.724	Dipodomys_ordii
ENSFHEG00000023065	srsf6a	55	86.339	ENSETEG00000006221	SRSF6	87	69.967	Echinops_telfairi
ENSFHEG00000023065	srsf6a	55	87.500	ENSEASG00005023429	SRSF6	87	70.199	Equus_asinus_asinus
ENSFHEG00000023065	srsf6a	55	87.500	ENSECAG00000023932	SRSF6	89	71.724	Equus_caballus
ENSFHEG00000023065	srsf6a	54	88.333	ENSELUG00000013506	SRSF6	96	69.909	Esox_lucius
ENSFHEG00000023065	srsf6a	54	86.022	ENSELUG00000024182	SRSF6	90	85.366	Esox_lucius
ENSFHEG00000023065	srsf6a	55	87.500	ENSFCAG00000032814	SRSF6	87	70.957	Felis_catus
ENSFHEG00000023065	srsf6a	55	66.120	ENSFDAG00000012191	SRSF6	86	55.921	Fukomys_damarensis
ENSFHEG00000023065	srsf6a	74	59.514	ENSGMOG00000006105	srsf6a	98	55.822	Gadus_morhua
ENSFHEG00000023065	srsf6a	54	86.111	ENSGMOG00000014458	srsf6a	85	60.059	Gadus_morhua
ENSFHEG00000023065	srsf6a	54	87.166	ENSGALG00000000990	SRSF6	90	66.984	Gallus_gallus
ENSFHEG00000023065	srsf6a	93	65.537	ENSGACG00000006084	srsf6a	95	75.556	Gasterosteus_aculeatus
ENSFHEG00000023065	srsf6a	55	85.561	ENSGAGG00000003238	SRSF6	90	71.019	Gopherus_agassizii
ENSFHEG00000023065	srsf6a	55	87.500	ENSGGOG00000009808	SRSF6	87	71.148	Gorilla_gorilla
ENSFHEG00000023065	srsf6a	66	78.879	ENSHBUG00000006386	-	98	69.497	Haplochromis_burtoni
ENSFHEG00000023065	srsf6a	57	69.430	ENSHGLG00000007701	-	98	54.062	Heterocephalus_glaber_female
ENSFHEG00000023065	srsf6a	55	87.500	ENSHGLG00000007348	SRSF6	88	70.724	Heterocephalus_glaber_female
ENSFHEG00000023065	srsf6a	55	66.120	ENSHGLG00100005043	SRSF6	86	55.921	Heterocephalus_glaber_male
ENSFHEG00000023065	srsf6a	91	78.033	ENSHCOG00000002740	srsf6a	94	77.636	Hippocampus_comes
ENSFHEG00000023065	srsf6a	52	84.571	ENSIPUG00000016856	SRSF6	92	66.562	Ictalurus_punctatus
ENSFHEG00000023065	srsf6a	54	89.071	ENSIPUG00000004776	-	92	70.064	Ictalurus_punctatus
ENSFHEG00000023065	srsf6a	55	87.500	ENSSTOG00000010866	SRSF6	87	70.820	Ictidomys_tridecemlineatus
ENSFHEG00000023065	srsf6a	88	79.310	ENSKMAG00000011934	srsf6a	92	77.955	Kryptolebias_marmoratus
ENSFHEG00000023065	srsf6a	54	89.674	ENSLBEG00000007356	srsf6a	95	70.349	Labrus_bergylta
ENSFHEG00000023065	srsf6a	54	78.022	ENSLACG00000009389	-	63	57.962	Latimeria_chalumnae
ENSFHEG00000023065	srsf6a	90	75.082	ENSLACG00000005466	SRSF6	88	72.368	Latimeria_chalumnae
ENSFHEG00000023065	srsf6a	55	87.500	ENSMFAG00000036925	SRSF6	87	71.148	Macaca_fascicularis
ENSFHEG00000023065	srsf6a	55	87.500	ENSMMUG00000006742	SRSF6	87	71.148	Macaca_mulatta
ENSFHEG00000023065	srsf6a	55	86.957	ENSMNEG00000038270	-	87	69.536	Macaca_nemestrina
ENSFHEG00000023065	srsf6a	55	86.957	ENSMNEG00000027392	-	87	70.820	Macaca_nemestrina
ENSFHEG00000023065	srsf6a	54	95.135	ENSMAMG00000017161	srsf6a	94	82.121	Mastacembelus_armatus
ENSFHEG00000023065	srsf6a	66	75.527	ENSMZEG00005008032	-	98	67.610	Maylandia_zebra
ENSFHEG00000023065	srsf6a	54	86.667	ENSMZEG00005020658	-	96	69.010	Maylandia_zebra
ENSFHEG00000023065	srsf6a	55	86.957	ENSMICG00000008537	SRSF6	87	70.297	Microcebus_murinus
ENSFHEG00000023065	srsf6a	55	86.486	ENSMODG00000003107	SRSF6	88	71.523	Monodelphis_domestica
ENSFHEG00000023065	srsf6a	100	71.717	ENSMALG00000003702	srsf6a	100	71.717	Monopterus_albus
ENSFHEG00000023065	srsf6a	55	87.500	MGP_CAROLIEiJ_G0024606	Srsf6	88	71.287	Mus_caroli
ENSFHEG00000023065	srsf6a	55	87.500	ENSMUSG00000016921	Srsf6	88	71.287	Mus_musculus
ENSFHEG00000023065	srsf6a	55	87.500	MGP_PahariEiJ_G0026050	Srsf6	88	71.287	Mus_pahari
ENSFHEG00000023065	srsf6a	55	87.500	MGP_SPRETEiJ_G0025528	Srsf6	88	71.287	Mus_spretus
ENSFHEG00000023065	srsf6a	55	87.500	ENSMPUG00000017692	SRSF6	99	72.414	Mustela_putorius_furo
ENSFHEG00000023065	srsf6a	55	65.761	ENSMLUG00000016618	SRSF6	87	57.237	Myotis_lucifugus
ENSFHEG00000023065	srsf6a	55	87.500	ENSNGAG00000017560	Srsf6	90	70.820	Nannospalax_galili
ENSFHEG00000023065	srsf6a	86	93.989	ENSNBRG00000001846	-	91	79.268	Neolamprologus_brichardi
ENSFHEG00000023065	srsf6a	54	84.066	ENSNBRG00000014709	-	98	69.497	Neolamprologus_brichardi
ENSFHEG00000023065	srsf6a	55	87.500	ENSNLEG00000006524	SRSF6	87	71.148	Nomascus_leucogenys
ENSFHEG00000023065	srsf6a	55	86.486	ENSMEUG00000014615	SRSF6	98	70.861	Notamacropus_eugenii
ENSFHEG00000023065	srsf6a	93	81.703	ENSONIG00000001925	-	88	83.962	Oreochromis_niloticus
ENSFHEG00000023065	srsf6a	66	72.868	ENSONIG00000020247	-	100	62.050	Oreochromis_niloticus
ENSFHEG00000023065	srsf6a	55	69.744	ENSOCUG00000009785	-	98	60.943	Oryctolagus_cuniculus
ENSFHEG00000023065	srsf6a	53	52.778	ENSOCUG00000023999	-	70	54.494	Oryctolagus_cuniculus
ENSFHEG00000023065	srsf6a	55	79.348	ENSORLG00000003530	srsf6a	95	62.170	Oryzias_latipes
ENSFHEG00000023065	srsf6a	55	78.804	ENSORLG00015009410	srsf6a	95	61.877	Oryzias_latipes_hsok
ENSFHEG00000023065	srsf6a	55	86.957	ENSOGAG00000014468	SRSF6	87	69.435	Otolemur_garnettii
ENSFHEG00000023065	srsf6a	55	84.699	ENSOARG00000003117	SRSF6	87	68.977	Ovis_aries
ENSFHEG00000023065	srsf6a	55	72.131	ENSPPAG00000043131	-	97	62.791	Pan_paniscus
ENSFHEG00000023065	srsf6a	55	86.957	ENSPPAG00000034327	-	87	70.820	Pan_paniscus
ENSFHEG00000023065	srsf6a	55	87.500	ENSPPRG00000008917	SRSF6	87	70.957	Panthera_pardus
ENSFHEG00000023065	srsf6a	54	80.769	ENSPTIG00000021305	-	65	59.936	Panthera_tigris_altaica
ENSFHEG00000023065	srsf6a	55	87.500	ENSPTRG00000044686	-	87	71.148	Pan_troglodytes
ENSFHEG00000023065	srsf6a	55	72.131	ENSPTRG00000046274	-	97	62.791	Pan_troglodytes
ENSFHEG00000023065	srsf6a	55	87.500	ENSPANG00000035224	SRSF6	87	71.148	Papio_anubis
ENSFHEG00000023065	srsf6a	53	74.302	ENSPKIG00000015703	-	93	75.000	Paramormyrops_kingsleyae
ENSFHEG00000023065	srsf6a	91	94.444	ENSPKIG00000018463	-	86	91.209	Paramormyrops_kingsleyae
ENSFHEG00000023065	srsf6a	93	73.354	ENSPMGG00000014963	srsf6a	92	74.006	Periophthalmus_magnuspinnatus
ENSFHEG00000023065	srsf6a	55	86.486	ENSPCIG00000003820	SRSF6	88	71.523	Phascolarctos_cinereus
ENSFHEG00000023065	srsf6a	54	81.319	ENSPCIG00000022430	-	64	62.025	Phascolarctos_cinereus
ENSFHEG00000023065	srsf6a	97	81.081	ENSPFOG00000006437	srsf6a	93	85.366	Poecilia_formosa
ENSFHEG00000023065	srsf6a	91	87.444	ENSPLAG00000009243	srsf6a	94	84.084	Poecilia_latipinna
ENSFHEG00000023065	srsf6a	55	88.298	ENSPMEG00000006056	SRSF6	89	84.043	Poecilia_mexicana
ENSFHEG00000023065	srsf6a	93	85.404	ENSPMEG00000006042	SRSF6	94	86.646	Poecilia_mexicana
ENSFHEG00000023065	srsf6a	55	87.500	ENSPPYG00000011019	SRSF6	87	71.148	Pongo_abelii
ENSFHEG00000023065	srsf6a	55	85.870	ENSPCAG00000010954	SRSF6	91	69.408	Procavia_capensis
ENSFHEG00000023065	srsf6a	55	86.957	ENSPCOG00000026364	SRSF6	87	70.627	Propithecus_coquereli
ENSFHEG00000023065	srsf6a	55	86.957	ENSPVAG00000015232	SRSF6	87	71.192	Pteropus_vampyrus
ENSFHEG00000023065	srsf6a	86	93.989	ENSPNYG00000011272	-	96	76.901	Pundamilia_nyererei
ENSFHEG00000023065	srsf6a	54	84.066	ENSPNYG00000004944	-	98	69.497	Pundamilia_nyererei
ENSFHEG00000023065	srsf6a	55	87.500	ENSRNOG00000006380	Srsf6	88	71.287	Rattus_norvegicus
ENSFHEG00000023065	srsf6a	55	87.500	ENSRROG00000029989	SRSF6	87	71.148	Rhinopithecus_roxellana
ENSFHEG00000023065	srsf6a	54	71.111	ENSSBOG00000034078	-	54	71.111	Saimiri_boliviensis_boliviensis
ENSFHEG00000023065	srsf6a	55	87.500	ENSSBOG00000033708	-	89	70.418	Saimiri_boliviensis_boliviensis
ENSFHEG00000023065	srsf6a	55	86.486	ENSSHAG00000012805	SRSF6	88	71.854	Sarcophilus_harrisii
ENSFHEG00000023065	srsf6a	78	77.308	ENSSFOG00015015169	SRSF6	93	79.032	Scleropages_formosus
ENSFHEG00000023065	srsf6a	93	65.698	ENSSFOG00015019681	-	93	68.605	Scleropages_formosus
ENSFHEG00000023065	srsf6a	66	69.198	ENSSMAG00000017447	-	55	81.768	Scophthalmus_maximus
ENSFHEG00000023065	srsf6a	91	64.091	ENSSMAG00000014819	-	85	76.818	Scophthalmus_maximus
ENSFHEG00000023065	srsf6a	54	95.135	ENSSDUG00000016097	srsf6a	94	80.909	Seriola_dumerili
ENSFHEG00000023065	srsf6a	93	77.538	ENSSLDG00000022841	srsf6a	94	80.909	Seriola_lalandi_dorsalis
ENSFHEG00000023065	srsf6a	54	87.912	ENSSPUG00000004967	SRSF6	89	69.481	Sphenodon_punctatus
ENSFHEG00000023065	srsf6a	93	69.811	ENSSPAG00000002362	srsf6a	88	79.911	Stegastes_partitus
ENSFHEG00000023065	srsf6a	55	87.500	ENSSSCG00000007362	SRSF6	96	72.509	Sus_scrofa
ENSFHEG00000023065	srsf6a	54	86.413	ENSTGUG00000003455	SRSF6	90	67.949	Taeniopygia_guttata
ENSFHEG00000023065	srsf6a	92	76.603	ENSTNIG00000001692	srsf6a	95	77.848	Tetraodon_nigroviridis
ENSFHEG00000023065	srsf6a	55	87.500	ENSUAMG00000003559	SRSF6	87	70.957	Ursus_americanus
ENSFHEG00000023065	srsf6a	93	89.241	ENSXMAG00000021849	srsf6a	93	88.608	Xiphophorus_maculatus