EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSFHEG00000023258 (Gene tree)
Gene ID: 105937472
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Fundulus_heteroclitus
Status: putative
Strand: Minus strand
Length: 46785 bases
Position: chrKN811511.1:54545-101329
Accession: 105937472
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSFHEP00000021280	RRM_1	PF00076.22	2.1e-05	1	1
ENSFHEP00000021277	RRM_1	PF00076.22	3.2e-05	1	1
ENSFHEP00000000199	RRM_1	PF00076.22	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSFHET00000015904	-	4419	-	ENSFHEP00000021280	1472 (aa)	-	-
ENSFHET00000015910	-	6286	-	ENSFHEP00000021277	1972 (aa)	-	-
ENSFHET00000015908	-	6048	XM_021324664	ENSFHEP00000000199	2016 (aa)	XP_021180339	-

Gene Model

Click here to download ENSFHEG00000023258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSFHEG00000023258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSFHEG00000023258	setd1a	53	78.571	ENSFHEG00000013126	setd1ba	64	61.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSFHEG00000023258	setd1a	83	94.527	ENSAPOG00000018002	setd1a	69	92.381	Acanthochromis_polyacanthus
ENSFHEG00000023258	setd1a	54	70.288	ENSAMEG00000007540	-	53	91.713	Ailuropoda_melanoleuca
ENSFHEG00000023258	setd1a	100	72.154	ENSACIG00000007144	setd1a	99	79.727	Amphilophus_citrinellus
ENSFHEG00000023258	setd1a	97	85.000	ENSAOCG00000003663	setd1a	90	79.129	Amphiprion_ocellaris
ENSFHEG00000023258	setd1a	94	97.561	ENSATEG00000022798	setd1a	90	75.000	Anabas_testudineus
ENSFHEG00000023258	setd1a	61	92.778	ENSACAG00000007606	-	60	92.778	Anolis_carolinensis
ENSFHEG00000023258	setd1a	96	97.368	ENSACLG00000024747	setd1a	89	77.750	Astatotilapia_calliptera
ENSFHEG00000023258	setd1a	59	83.607	ENSAMXG00000009497	setd1a	100	55.787	Astyanax_mexicanus
ENSFHEG00000023258	setd1a	64	73.145	ENSTSYG00000014425	-	77	69.759	Carlito_syrichta
ENSFHEG00000023258	setd1a	59	74.490	ENSCAPG00000006491	-	91	50.467	Cavia_aperea
ENSFHEG00000023258	setd1a	52	72.148	ENSCPBG00000010830	-	55	67.230	Chrysemys_picta_bellii
ENSFHEG00000023258	setd1a	68	83.333	ENSCSEG00000021605	setd1a	100	68.566	Cynoglossus_semilaevis
ENSFHEG00000023258	setd1a	97	93.103	ENSCVAG00000011672	setd1a	89	83.799	Cyprinodon_variegatus
ENSFHEG00000023258	setd1a	90	72.836	ENSDARG00000060030	setd1a	94	67.078	Danio_rerio
ENSFHEG00000023258	setd1a	62	73.958	ENSECAG00000015162	SETD1A	77	68.512	Equus_caballus
ENSFHEG00000023258	setd1a	96	91.379	ENSELUG00000020261	setd1a	78	72.472	Esox_lucius
ENSFHEG00000023258	setd1a	52	80.925	ENSGMOG00000013774	setd1a	50	80.925	Gadus_morhua
ENSFHEG00000023258	setd1a	82	92.593	ENSGAFG00000011698	setd1a	94	89.573	Gambusia_affinis
ENSFHEG00000023258	setd1a	81	83.391	ENSGACG00000013688	setd1a	93	80.583	Gasterosteus_aculeatus
ENSFHEG00000023258	setd1a	78	66.118	ENSGAGG00000010781	-	79	65.461	Gopherus_agassizii
ENSFHEG00000023258	setd1a	96	97.368	ENSHBUG00000008893	setd1a	100	71.900	Haplochromis_burtoni
ENSFHEG00000023258	setd1a	78	61.856	ENSHGLG00000014238	-	100	44.387	Heterocephalus_glaber_female
ENSFHEG00000023258	setd1a	51	72.510	ENSHGLG00100010551	-	83	76.744	Heterocephalus_glaber_male
ENSFHEG00000023258	setd1a	100	63.445	ENSHCOG00000003119	setd1a	99	71.958	Hippocampus_comes
ENSFHEG00000023258	setd1a	96	79.032	ENSIPUG00000007413	setd1a	73	87.805	Ictalurus_punctatus
ENSFHEG00000023258	setd1a	97	89.231	ENSKMAG00000009484	setd1a	89	78.841	Kryptolebias_marmoratus
ENSFHEG00000023258	setd1a	69	84.127	ENSLBEG00000004399	setd1a	90	73.293	Labrus_bergylta
ENSFHEG00000023258	setd1a	64	74.564	ENSMNEG00000032572	-	82	70.627	Macaca_nemestrina
ENSFHEG00000023258	setd1a	88	88.889	ENSMAMG00000021851	setd1a	97	89.764	Mastacembelus_armatus
ENSFHEG00000023258	setd1a	96	97.368	ENSMZEG00005023141	setd1a	89	77.750	Maylandia_zebra
ENSFHEG00000023258	setd1a	90	84.247	ENSMMOG00000016992	setd1a	99	74.927	Mola_mola
ENSFHEG00000023258	setd1a	51	68.033	ENSMODG00000001726	-	76	59.375	Monodelphis_domestica
ENSFHEG00000023258	setd1a	92	88.462	ENSMALG00000007401	setd1a	98	69.028	Monopterus_albus
ENSFHEG00000023258	setd1a	64	75.170	MGP_CAROLIEiJ_G0030519	-	100	72.081	Mus_caroli
ENSFHEG00000023258	setd1a	64	75.170	ENSMUSG00000042308	Setd1a	100	72.081	Mus_musculus
ENSFHEG00000023258	setd1a	64	75.170	MGP_PahariEiJ_G0013726	-	100	72.081	Mus_pahari
ENSFHEG00000023258	setd1a	64	75.170	MGP_SPRETEiJ_G0031633	Setd1a	100	71.574	Mus_spretus
ENSFHEG00000023258	setd1a	53	70.861	ENSMLUG00000027303	-	59	63.830	Myotis_lucifugus
ENSFHEG00000023258	setd1a	85	80.426	ENSNBRG00000004760	setd1a	100	73.794	Neolamprologus_brichardi
ENSFHEG00000023258	setd1a	70	73.103	ENSMEUG00000003396	-	86	56.445	Notamacropus_eugenii
ENSFHEG00000023258	setd1a	83	99.444	ENSONIG00000009854	setd1a	88	80.952	Oreochromis_niloticus
ENSFHEG00000023258	setd1a	99	73.634	ENSORLG00000002213	setd1a	100	69.841	Oryzias_latipes
ENSFHEG00000023258	setd1a	94	90.385	ENSORLG00020011897	setd1a	89	75.278	Oryzias_latipes_hni
ENSFHEG00000023258	setd1a	94	90.385	ENSORLG00015004826	setd1a	89	75.253	Oryzias_latipes_hsok
ENSFHEG00000023258	setd1a	93	92.727	ENSOMEG00000019732	setd1a	89	73.063	Oryzias_melastigma
ENSFHEG00000023258	setd1a	76	57.285	ENSOGAG00000028006	-	100	38.232	Otolemur_garnettii
ENSFHEG00000023258	setd1a	62	73.643	ENSPTIG00000010871	-	83	73.180	Panthera_tigris_altaica
ENSFHEG00000023258	setd1a	54	69.565	ENSPCIG00000016725	-	87	61.254	Phascolarctos_cinereus
ENSFHEG00000023258	setd1a	97	88.889	ENSPFOG00000013669	setd1a	89	81.339	Poecilia_formosa
ENSFHEG00000023258	setd1a	97	90.625	ENSPLAG00000009294	setd1a	89	83.714	Poecilia_latipinna
ENSFHEG00000023258	setd1a	97	90.625	ENSPMEG00000005864	setd1a	89	83.730	Poecilia_mexicana
ENSFHEG00000023258	setd1a	96	90.625	ENSPREG00000010201	setd1a	100	75.329	Poecilia_reticulata
ENSFHEG00000023258	setd1a	57	92.233	ENSPPYG00000007296	-	100	92.233	Pongo_abelii
ENSFHEG00000023258	setd1a	84	70.874	ENSPVAG00000011049	-	77	70.874	Pteropus_vampyrus
ENSFHEG00000023258	setd1a	97	80.952	ENSPNYG00000014139	setd1a	100	72.393	Pundamilia_nyererei
ENSFHEG00000023258	setd1a	99	56.229	ENSPNAG00000019165	setd1a	100	56.514	Pygocentrus_nattereri
ENSFHEG00000023258	setd1a	63	75.000	ENSRROG00000040062	-	70	72.165	Rhinopithecus_roxellana
ENSFHEG00000023258	setd1a	71	71.525	ENSSHAG00000010784	-	89	52.422	Sarcophilus_harrisii
ENSFHEG00000023258	setd1a	88	97.561	ENSSFOG00015007013	setd1a	71	71.233	Scleropages_formosus
ENSFHEG00000023258	setd1a	94	95.122	ENSSMAG00000008846	setd1a	89	75.113	Scophthalmus_maximus
ENSFHEG00000023258	setd1a	99	76.815	ENSSDUG00000022142	setd1a	90	78.117	Seriola_dumerili
ENSFHEG00000023258	setd1a	99	76.815	ENSSLDG00000018250	setd1a	90	78.117	Seriola_lalandi_dorsalis
ENSFHEG00000023258	setd1a	96	86.667	ENSSPAG00000007822	setd1a	90	78.937	Stegastes_partitus
ENSFHEG00000023258	setd1a	89	79.147	ENSTRUG00000008953	setd1a	99	71.358	Takifugu_rubripes
ENSFHEG00000023258	setd1a	83	96.257	ENSTNIG00000014930	setd1a	91	74.000	Tetraodon_nigroviridis
ENSFHEG00000023258	setd1a	54	71.906	ENSVVUG00000027687	-	71	63.333	Vulpes_vulpes
ENSFHEG00000023258	setd1a	56	77.143	ENSXETG00000001921	setd1a	76	44.821	Xenopus_tropicalis
ENSFHEG00000023258	setd1a	96	82.770	ENSXCOG00000017585	setd1a	100	77.514	Xiphophorus_couchianus
ENSFHEG00000023258	setd1a	97	89.062	ENSXMAG00000008021	setd1a	89	84.221	Xiphophorus_maculatus