EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • Phenotypes
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000005100 (Gene tree)
Gene ID
56919
Gene Symbol
DHX33
Alias
FLJ21972|DKFZp762F2011|DDX33
Full Name
DEAH-box helicase 33
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
28,149 bases
Position
chr17:5,440,912-5,469,060
Accession
16718
RBP type
canonical RBP
Summary
This gene encodes a member of the DEAD box protein family. The DEAD box proteins are characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2010]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000225296DEADPF00270.295.7e-0611
ENSP00000413779HA2PF04408.231.6e-1911
ENSP00000458925HA2PF04408.232.3e-1911
ENSP00000225296HA2PF04408.232.7e-1911
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
21930779Identification of DHX33 as a mediator of rRNA synthesis and cell growth.Mol Cell Biol2011 DecZhang Ydoi: 10.1128/MCB.05832-11
29870660Recombinant DHX33 Protein Possesses Dual DNA/RNA Helicase Activity.Biochemistry2019 Jan 29Wang Xdoi: 10.1021/acs.biochem.8b00166
30684270A 54-kDa short variant of DHX33 functions in regulating mRNA translation.J Cell Physiol2019 Jan 26Su Ddoi: 10.1002/jcp.28178
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000433302DHX33-2022225XM_017024877ENSP00000413779483 (aa)XP_016880366Q05BE5
ENST00000574023DHX33-2042040-ENSP0000045820393 (aa)-I3L0M5
ENST00000225296DHX33-2015618-ENSP00000225296707 (aa)-Q9H6R0
ENST00000575153DHX33-2052416--- (aa)--
ENST00000572490DHX33-2032564-ENSP00000458925617 (aa)-I3L1L6
Gene Model
Click here to download ENSG00000005100's gene model file
Pathways
Pathway IDPathway NameSource
hsa04621NOD-like receptor signaling pathwayKEGG
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000005100Erythrocyte Indices4.2420000E-006-
ENSG00000005100lycopene3.5250000E-005-
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000005100's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000005100DHX339042.085ENSG00000150990DHX377341.007
ENSG00000005100DHX339144.665ENSG00000101452DHX359244.665
ENSG00000005100DHX339142.478ENSG00000140829DHX387841.905
ENSG00000005100DHX338236.816ENSG00000174953DHX369234.951
ENSG00000005100DHX338947.393ENSG00000067596DHX88930.894
ENSG00000005100DHX339130.344ENSG00000144045DQX19130.643
ENSG00000005100DHX339146.177ENSG00000204560DHX169044.639
ENSG00000005100DHX339833.281ENSG00000108406DHX408844.915
ENSG00000005100DHX338942.724ENSG00000109606DHX158042.724
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000005100DHX3310068.883ENSAPOG00000010132dhx3310068.883Acanthochromis_polyacanthus
ENSG00000005100DHX339287.018ENSAMEG00000006026DHX339587.988Ailuropoda_melanoleuca
ENSG00000005100DHX3310069.307ENSACIG00000012591dhx3310069.307Amphilophus_citrinellus
ENSG00000005100DHX3310068.458ENSAOCG00000007008dhx3310068.458Amphiprion_ocellaris
ENSG00000005100DHX3310065.493ENSAPEG00000013599dhx3310065.493Amphiprion_percula
ENSG00000005100DHX3310068.883ENSATEG00000005019dhx3310068.883Anabas_testudineus
ENSG00000005100DHX339284.683ENSAPLG00000015593DHX3310086.579Anas_platyrhynchos
ENSG00000005100DHX339177.379ENSACAG00000015095DHX339776.263Anolis_carolinensis
ENSG00000005100DHX3310095.652ENSANAG00000037748DHX3310097.626Aotus_nancymaae
ENSG00000005100DHX3310068.883ENSACLG00000025610dhx3310068.883Astatotilapia_calliptera
ENSG00000005100DHX3310071.429ENSAMXG00000015875dhx338871.429Astyanax_mexicanus
ENSG00000005100DHX3310091.655ENSBTAG00000032083DHX3310091.372Bos_taurus
ENSG00000005100DHX338838.218WBGene00020263let-3557738.218Caenorhabditis_elegans
ENSG00000005100DHX3310097.171ENSCJAG00000011321DHX3310097.171Callithrix_jacchus
ENSG00000005100DHX339289.437ENSCAFG00000015535DHX339990.865Canis_familiaris
ENSG00000005100DHX3310088.826ENSCAFG00020016360DHX3310088.543Canis_lupus_dingo
ENSG00000005100DHX3310091.655ENSCHIG00000014722DHX3310091.372Capra_hircus
ENSG00000005100DHX3310091.089ENSTSYG00000005995DHX3310091.089Carlito_syrichta
ENSG00000005100DHX339293.486ENSCAPG00000009660DHX339794.754Cavia_aperea
ENSG00000005100DHX339892.785ENSCPOG00000003681DHX339992.641Cavia_porcellus
ENSG00000005100DHX3310097.595ENSCCAG00000027955DHX3310097.595Cebus_capucinus
ENSG00000005100DHX3310097.878ENSCATG00000029157DHX3310097.878Cercocebus_atys
ENSG00000005100DHX3310093.026ENSCLAG00000014171DHX3310093.305Chinchilla_lanigera
ENSG00000005100DHX339498.851ENSCSAG00000012784DHX339382.378Chlorocebus_sabaeus
ENSG00000005100DHX339486.364ENSCHOG00000008707DHX339086.667Choloepus_hoffmanni
ENSG00000005100DHX3310080.339ENSCPBG00000027741DHX3310080.395Chrysemys_picta_bellii
ENSG00000005100DHX339255.810ENSCING00000009139-10055.730Ciona_intestinalis
ENSG00000005100DHX3310098.303ENSCANG00000034385DHX3310098.303Colobus_angolensis_palliatus
ENSG00000005100DHX3310092.948ENSCGRG00001023101Dhx3310092.948Cricetulus_griseus_chok1gshd
ENSG00000005100DHX339292.958ENSCGRG00000010329Dhx3310094.754Cricetulus_griseus_crigri
ENSG00000005100DHX3310069.590ENSCSEG00000011017dhx3310069.590Cynoglossus_semilaevis
ENSG00000005100DHX3310067.610ENSCVAG00000008998dhx3310067.327Cyprinodon_variegatus
ENSG00000005100DHX3310071.004ENSDARG00000051785dhx3310070.721Danio_rerio
ENSG00000005100DHX3310093.777ENSDNOG00000016865DHX339293.494Dasypus_novemcinctus
ENSG00000005100DHX339478.409ENSDORG00000014344Dhx3310089.510Dipodomys_ordii
ENSG00000005100DHX339145.636FBgn0032194CG49019445.636Drosophila_melanogaster
ENSG00000005100DHX339043.069ENSEBUG00000008342dhx339544.593Eptatretus_burgeri
ENSG00000005100DHX3310095.474ENSEASG00005015338DHX3310095.332Equus_asinus_asinus
ENSG00000005100DHX3310095.332ENSECAG00000010272DHX3310095.191Equus_caballus
ENSG00000005100DHX338788.923ENSEEUG00000008589-7296.491Erinaceus_europaeus
ENSG00000005100DHX3310069.165ENSELUG00000020257dhx3310069.165Esox_lucius
ENSG00000005100DHX3310088.967ENSFCAG00000014755DHX3310088.967Felis_catus
ENSG00000005100DHX339277.289ENSFALG00000009785DHX339975.149Ficedula_albicollis
ENSG00000005100DHX3310088.826ENSFDAG00000003334DHX3310088.826Fukomys_damarensis
ENSG00000005100DHX338667.585ENSFHEG00000014253dhx339567.261Fundulus_heteroclitus
ENSG00000005100DHX3310068.317ENSGMOG00000012350dhx3310068.317Gadus_morhua
ENSG00000005100DHX3310068.034ENSGAFG00000014811dhx339673.977Gambusia_affinis
ENSG00000005100DHX3310068.883ENSGACG00000020229dhx3310069.448Gasterosteus_aculeatus
ENSG00000005100DHX339285.366ENSGAGG00000013448DHX339985.366Gopherus_agassizii
ENSG00000005100DHX3310099.151ENSGGOG00000002748DHX3310099.151Gorilla_gorilla
ENSG00000005100DHX3310068.883ENSHBUG00000017415dhx3310068.883Haplochromis_burtoni
ENSG00000005100DHX3310092.500ENSHGLG00000014753DHX3310092.350Heterocephalus_glaber_female
ENSG00000005100DHX339494.570ENSHGLG00100012963DHX339994.368Heterocephalus_glaber_male
ENSG00000005100DHX3310068.317ENSHCOG00000011161dhx3310068.317Hippocampus_comes
ENSG00000005100DHX3310071.711ENSIPUG00000011594dhx3310071.711Ictalurus_punctatus
ENSG00000005100DHX3310093.927ENSSTOG00000003298DHX3310094.492Ictidomys_tridecemlineatus
ENSG00000005100DHX3310091.796ENSJJAG00000016626Dhx3310091.513Jaculus_jaculus
ENSG00000005100DHX3310068.741ENSKMAG00000013595dhx3310068.600Kryptolebias_marmoratus
ENSG00000005100DHX3310069.590ENSLBEG00000005703dhx3310069.590Labrus_bergylta
ENSG00000005100DHX339975.036ENSLACG00000018174DHX339480.062Latimeria_chalumnae
ENSG00000005100DHX339063.701ENSLOCG00000002764dhx339763.701Lepisosteus_oculatus
ENSG00000005100DHX3310093.512ENSLAFG00000007136DHX3310093.230Loxodonta_africana
ENSG00000005100DHX3310098.161ENSMFAG00000042578DHX3310098.161Macaca_fascicularis
ENSG00000005100DHX3310098.161ENSMMUG00000006594DHX3310098.161Macaca_mulatta
ENSG00000005100DHX339498.851ENSMNEG00000034809DHX3310091.304Macaca_nemestrina
ENSG00000005100DHX3310098.020ENSMLEG00000034236DHX3310098.020Mandrillus_leucophaeus
ENSG00000005100DHX3310069.873ENSMAMG00000005936dhx3310070.438Mastacembelus_armatus
ENSG00000005100DHX3310068.741ENSMZEG00005023292dhx3310068.741Maylandia_zebra
ENSG00000005100DHX339283.888ENSMGAG00000003125DHX3310085.993Meleagris_gallopavo
ENSG00000005100DHX3310093.211ENSMAUG00000011100Dhx3310093.069Mesocricetus_auratus
ENSG00000005100DHX3310095.898ENSMICG00000012715DHX3310095.898Microcebus_murinus
ENSG00000005100DHX3310092.928ENSMOCG00000016069Dhx3310092.645Microtus_ochrogaster
ENSG00000005100DHX3310066.761ENSMMOG00000005732dhx3310066.761Mola_mola
ENSG00000005100DHX339978.895ENSMODG00000016649DHX339978.470Monodelphis_domestica
ENSG00000005100DHX339969.405ENSMALG00000000923dhx339969.405Monopterus_albus
ENSG00000005100DHX3310092.928MGP_CAROLIEiJ_G0016657Dhx3310092.928Mus_caroli
ENSG00000005100DHX3310092.645ENSMUSG00000040620Dhx3310092.362Mus_musculus
ENSG00000005100DHX3310092.938MGP_PahariEiJ_G0017788Dhx3310092.797Mus_pahari
ENSG00000005100DHX3310092.645MGP_SPRETEiJ_G0017493Dhx3310092.504Mus_spretus
ENSG00000005100DHX338789.326ENSMPUG00000011250DHX3310089.326Mustela_putorius_furo
ENSG00000005100DHX3310091.983ENSMLUG00000014439DHX339292.264Myotis_lucifugus
ENSG00000005100DHX3310092.504ENSNGAG00000017139Dhx3310092.504Nannospalax_galili
ENSG00000005100DHX3310068.600ENSNBRG00000017674dhx3310069.165Neolamprologus_brichardi
ENSG00000005100DHX336797.846ENSNLEG00000009098-10098.267Nomascus_leucogenys
ENSG00000005100DHX338379.966ENSMEUG00000009202DHX3310079.966Notamacropus_eugenii
ENSG00000005100DHX3310088.967ENSOPRG00000013163DHX3310089.958Ochotona_princeps
ENSG00000005100DHX3310092.645ENSODEG00000017026DHX3310092.504Octodon_degus
ENSG00000005100DHX339969.373ENSONIG00000017480dhx339569.373Oreochromis_niloticus
ENSG00000005100DHX335866.140ENSOANG00000000524-10066.140Ornithorhynchus_anatinus
ENSG00000005100DHX336370.380ENSOANG00000002808-10070.380Ornithorhynchus_anatinus
ENSG00000005100DHX3310086.890ENSOCUG00000004805DHX3310086.750Oryctolagus_cuniculus
ENSG00000005100DHX3310067.327ENSORLG00000011817dhx3310067.044Oryzias_latipes
ENSG00000005100DHX3310067.751ENSORLG00020016766dhx3310067.468Oryzias_latipes_hni
ENSG00000005100DHX339172.231ENSORLG00015022753dhx339872.231Oryzias_latipes_hsok
ENSG00000005100DHX339968.272ENSOMEG00000010438dhx339968.130Oryzias_melastigma
ENSG00000005100DHX339994.625ENSOGAG00000001611DHX339394.499Otolemur_garnettii
ENSG00000005100DHX339393.020ENSOARG00000003235DHX339693.020Ovis_aries
ENSG00000005100DHX3310099.576ENSPPAG00000038926DHX3310099.576Pan_paniscus
ENSG00000005100DHX3310087.836ENSPPRG00000009202DHX3310087.694Panthera_pardus
ENSG00000005100DHX336871.608ENSPTIG00000018141DHX338571.784Panthera_tigris_altaica
ENSG00000005100DHX3310099.434ENSPTRG00000008632DHX3310099.434Pan_troglodytes
ENSG00000005100DHX3310097.878ENSPANG00000024297DHX3310097.878Papio_anubis
ENSG00000005100DHX3310072.560ENSPKIG00000017401dhx3310072.560Paramormyrops_kingsleyae
ENSG00000005100DHX339283.099ENSPSIG00000006293DHX339384.943Pelodiscus_sinensis
ENSG00000005100DHX3310068.883ENSPMGG00000013896dhx3310068.883Periophthalmus_magnuspinnatus
ENSG00000005100DHX3310092.928ENSPEMG00000016472Dhx3310092.786Peromyscus_maniculatus_bairdii
ENSG00000005100DHX3310079.379ENSPCIG00000020074DHX3310079.096Phascolarctos_cinereus
ENSG00000005100DHX3310067.327ENSPFOG00000009426dhx3310067.044Poecilia_formosa
ENSG00000005100DHX3310067.610ENSPLAG00000017730dhx3310067.327Poecilia_latipinna
ENSG00000005100DHX3310067.610ENSPMEG00000012075dhx339973.021Poecilia_mexicana
ENSG00000005100DHX3310067.373ENSPREG00000008239dhx3310067.090Poecilia_reticulata
ENSG00000005100DHX3310099.010ENSPPYG00000007871DHX339299.010Pongo_abelii
ENSG00000005100DHX3310083.192ENSPCAG00000006190DHX3310082.910Procavia_capensis
ENSG00000005100DHX3310096.040ENSPCOG00000007524DHX3310096.040Propithecus_coquereli
ENSG00000005100DHX3310093.918ENSPVAG00000002467DHX3310093.777Pteropus_vampyrus
ENSG00000005100DHX3310068.741ENSPNYG00000021648dhx3310069.307Pundamilia_nyererei
ENSG00000005100DHX3310071.570ENSPNAG00000020048dhx3310071.570Pygocentrus_nattereri
ENSG00000005100DHX3310093.352ENSRNOG00000007054Dhx3310093.211Rattus_norvegicus
ENSG00000005100DHX3310097.878ENSRBIG00000040087DHX3310097.878Rhinopithecus_bieti
ENSG00000005100DHX3310098.020ENSRROG00000038052DHX3310098.020Rhinopithecus_roxellana
ENSG00000005100DHX338840.000YKL078W-8739.969Saccharomyces_cerevisiae
ENSG00000005100DHX3310094.908ENSSBOG00000020529DHX3310094.908Saimiri_boliviensis_boliviensis
ENSG00000005100DHX3310076.560ENSSHAG00000002762DHX3310083.524Sarcophilus_harrisii
ENSG00000005100DHX339974.716ENSSFOG00015001783dhx339974.432Scleropages_formosus
ENSG00000005100DHX3310069.165ENSSMAG00000000497dhx3310069.731Scophthalmus_maximus
ENSG00000005100DHX3310068.317ENSSDUG00000017798dhx3310068.317Seriola_dumerili
ENSG00000005100DHX3310067.751ENSSLDG00000020132dhx3310067.751Seriola_lalandi_dorsalis
ENSG00000005100DHX3310089.533ENSSARG00000009813DHX3310089.250Sorex_araneus
ENSG00000005100DHX336783.385ENSSPUG00000010498-10084.406Sphenodon_punctatus
ENSG00000005100DHX336770.218ENSSPAG00000003711-10070.218Stegastes_partitus
ENSG00000005100DHX3310068.458ENSSPAG00000012860dhx3310068.458Stegastes_partitus
ENSG00000005100DHX3310087.270ENSSSCG00000039064DHX3310086.846Sus_scrofa
ENSG00000005100DHX339276.761ENSTGUG00000004226DHX3310077.778Taeniopygia_guttata
ENSG00000005100DHX3310068.883ENSTRUG00000003395dhx3310068.741Takifugu_rubripes
ENSG00000005100DHX339964.306ENSTNIG00000008546dhx3310064.306Tetraodon_nigroviridis
ENSG00000005100DHX339284.091ENSTBEG00000008531DHX335996.894Tupaia_belangeri
ENSG00000005100DHX337685.193ENSTTRG00000014788DHX338487.598Tursiops_truncatus
ENSG00000005100DHX3310090.240ENSUAMG00000012182DHX3310089.958Ursus_americanus
ENSG00000005100DHX339590.000ENSVVUG00000027336DHX339990.715Vulpes_vulpes
ENSG00000005100DHX339976.681ENSXETG00000009173dhx339676.571Xenopus_tropicalis
ENSG00000005100DHX3310067.751ENSXCOG00000004969dhx3310067.468Xiphophorus_couchianus
ENSG00000005100DHX3310067.893ENSXMAG00000005679dhx3310067.893Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000182rDNA binding21930779.IDAFunction
GO:0003723RNA binding22658674.HDAFunction
GO:0003723RNA binding21873635.IBAFunction
GO:0003725double-stranded RNA binding23871209.IDAFunction
GO:0003729mRNA binding26100019.IDAFunction
GO:0005515protein binding23871209.26100019.IPIFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus23871209.IDAComponent
GO:0005654nucleoplasm21930779.IDAComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus21930779.IDAComponent
GO:0005737cytoplasm23871209.IDAComponent
GO:0006413translational initiation-IEAProcess
GO:0032481positive regulation of type I interferon production-ISSProcess
GO:0033613activating transcription factor binding-IEAFunction
GO:0034459ATP-dependent 3'-5' RNA helicase activity21873635.IBAFunction
GO:0043023ribosomal large subunit binding26100019.IPIFunction
GO:0043410positive regulation of MAPK cascade-ISSProcess
GO:0045943positive regulation of transcription by RNA polymerase I21873635.IBAProcess
GO:0045943positive regulation of transcription by RNA polymerase I21930779.IDAProcess
GO:0051092positive regulation of NF-kappaB transcription factor activity-ISSProcess
GO:0072559NLRP3 inflammasome complex23871209.IDAComponent
GO:1900227positive regulation of NLRP3 inflammasome complex assembly23871209.IDAProcess

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