EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • PRI
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000029363 (Gene tree)
Gene ID
9774
Gene Symbol
BCLAF1
Alias
KIAA0164|BTF
Full Name
BCL2 associated transcription factor 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
34,019 bases
Position
chr6:136,256,627-136,290,645
Accession
16863
RBP type
canonical RBP
Summary
This gene encodes a transcriptional repressor that interacts with several members of the BCL2 family of proteins. Overexpression of this protein induces apoptosis, which can be suppressed by co-expression of BCL2 proteins. The protein localizes to dot-like structures throughout the nucleus, and redistributes to a zone near the nuclear envelope in cells undergoing apoptosis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000229446THRAP3_BCLAF1PF15440.64.3e-18511
ENSP00000376159THRAP3_BCLAF1PF15440.64.3e-18511
ENSP00000435441THRAP3_BCLAF1PF15440.64.5e-18511
ENSP00000434826THRAP3_BCLAF1PF15440.65.3e-18511
ENSP00000435210THRAP3_BCLAF1PF15440.65.5e-18511
ENSP00000487249THRAP3_BCLAF1PF15440.61.8e-18411
ENSP00000431734THRAP3_BCLAF1PF15440.61.3e-17611
ENSP00000436501THRAP3_BCLAF1PF15440.62.6e-13512
ENSP00000436501THRAP3_BCLAF1PF15440.62.6e-13522
ENSP00000437018BtzPF09405.100.0008111
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNANascentRICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000530767BCLAF1-2134186XM_017011529ENSP00000436501747 (aa)XP_016867018Q9NYF8
ENST00000392348BCLAF1-2022610-ENSP00000376159869 (aa)-Q9NYF8
ENST00000640069BCLAF1-2247719-ENSP00000491530703 (aa)-A0A1W2PQ43
ENST00000534269BCLAF1-2194239-ENSP00000433822467 (aa)-E9PJA7
ENST00000534321BCLAF1-220519--- (aa)--
ENST00000528229BCLAF1-208573--- (aa)--
ENST00000531224BCLAF1-2147263XM_017011532ENSP00000435210920 (aa)XP_016867021Q9NYF8
ENST00000534762BCLAF1-221744-ENSP00000437018187 (aa)-H0YF14
ENST00000476194BCLAF1-203630--- (aa)--
ENST00000529826BCLAF1-2102423-ENSP00000431734725 (aa)-E9PK09
ENST00000527759BCLAF1-2074373-ENSP00000434826918 (aa)-Q9NYF8
ENST00000530429BCLAF1-2123167-ENSP00000436142750 (aa)-E9PQN2
ENST00000532076BCLAF1-215560--- (aa)--
ENST00000532384BCLAF1-2163237-ENSP00000433505752 (aa)-E9PKI6
ENST00000526228BCLAF1-204572--- (aa)--
ENST00000533621BCLAF1-218574-ENSP00000436913118 (aa)-H0YF00
ENST00000353331BCLAF1-2017110XM_017011531ENSP00000229446869 (aa)XP_016867020Q9NYF8
ENST00000527613BCLAF1-2065640-ENSP00000436216752 (aa)-E9PKI6
ENST00000529522BCLAF1-2091093--- (aa)--
ENST00000534792BCLAF1-222552--- (aa)--
ENST00000527536BCLAF1-2055371XM_005267237ENSP00000435441871 (aa)XP_005267294E9PK91
ENST00000533422BCLAF1-217692-ENSP00000437333126 (aa)-H0YF63
ENST00000529917BCLAF1-2111336--- (aa)--
ENST00000628517BCLAF1-2232512-ENSP00000487249752 (aa)-E9PKI6
Gene Model
Click here to download ENSG00000029363's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000029363's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000029363BCLAF110097.802ENSAMEG00000009989BCLAF19998.048Ailuropoda_melanoleuca
ENSG00000029363BCLAF16254.237ENSACIG00000015331thrap3b5041.741Amphilophus_citrinellus
ENSG00000029363BCLAF19392.476ENSAPLG00000007570BCLAF19489.516Anas_platyrhynchos
ENSG00000029363BCLAF19388.862ENSACAG00000017011BCLAF19484.943Anolis_carolinensis
ENSG00000029363BCLAF110099.734ENSANAG00000035003BCLAF110099.734Aotus_nancymaae
ENSG00000029363BCLAF110098.817ENSBTAG00000007802BCLAF110098.154Bos_taurus
ENSG00000029363BCLAF1100100.000ENSCJAG00000008200BCLAF110099.786Callithrix_jacchus
ENSG00000029363BCLAF110098.371ENSCAFG00000000245BCLAF110098.371Canis_familiaris
ENSG00000029363BCLAF19398.361ENSCAFG00020022554BCLAF110098.397Canis_lupus_dingo
ENSG00000029363BCLAF110098.817ENSCHIG00000000525BCLAF110098.046Capra_hircus
ENSG00000029363BCLAF16549.194ENSTSYG00000011370-6735.783Carlito_syrichta
ENSG00000029363BCLAF110099.468ENSTSYG00000008161BCLAF110099.468Carlito_syrichta
ENSG00000029363BCLAF19898.475ENSCAPG00000009463-10098.475Cavia_aperea
ENSG00000029363BCLAF110098.043ENSCPOG00000008088BCLAF110098.043Cavia_porcellus
ENSG00000029363BCLAF1100100.000ENSCCAG00000032457BCLAF1100100.000Cebus_capucinus
ENSG00000029363BCLAF110099.867ENSCATG00000018862BCLAF110099.867Cercocebus_atys
ENSG00000029363BCLAF15954.839ENSCATG00000038343-6539.660Cercocebus_atys
ENSG00000029363BCLAF16742.969ENSCATG00000035101-5842.006Cercocebus_atys
ENSG00000029363BCLAF110098.521ENSCLAG00000004401BCLAF110098.046Chinchilla_lanigera
ENSG00000029363BCLAF1100100.000ENSCSAG00000016867BCLAF110099.657Chlorocebus_sabaeus
ENSG00000029363BCLAF16055.224ENSCSAG00000001098THRAP36539.876Chlorocebus_sabaeus
ENSG00000029363BCLAF19391.990ENSCPBG00000017585BCLAF19490.253Chrysemys_picta_bellii
ENSG00000029363BCLAF110099.786ENSCANG00000043071BCLAF110099.786Colobus_angolensis_palliatus
ENSG00000029363BCLAF15954.839ENSCANG00000043028THRAP36539.660Colobus_angolensis_palliatus
ENSG00000029363BCLAF19971.770ENSCANG00000003205-8792.994Colobus_angolensis_palliatus
ENSG00000029363BCLAF19996.800ENSCGRG00001024620-10084.930Cricetulus_griseus_chok1gshd
ENSG00000029363BCLAF19585.149ENSCGRG00001003851-9375.143Cricetulus_griseus_chok1gshd
ENSG00000029363BCLAF110087.167ENSCGRG00001015898-9381.661Cricetulus_griseus_chok1gshd
ENSG00000029363BCLAF19998.817ENSCGRG00000004873-9387.500Cricetulus_griseus_crigri
ENSG00000029363BCLAF110098.817ENSCGRG00000009622-10097.503Cricetulus_griseus_crigri
ENSG00000029363BCLAF16851.908ENSCVAG00000001547thrap3b6435.726Cyprinodon_variegatus
ENSG00000029363BCLAF15258.586ENSDARG00000098228thrap3b7740.164Danio_rerio
ENSG00000029363BCLAF110098.521ENSDNOG00000019473BCLAF110097.477Dasypus_novemcinctus
ENSG00000029363BCLAF110098.225ENSDORG00000015144Bclaf110097.937Dipodomys_ordii
ENSG00000029363BCLAF18797.337ENSETEG00000015572BCLAF17298.039Echinops_telfairi
ENSG00000029363BCLAF110098.263ENSEASG00005011177BCLAF19998.263Equus_asinus_asinus
ENSG00000029363BCLAF110099.112ENSECAG00000023692BCLAF110098.371Equus_caballus
ENSG00000029363BCLAF15253.731ENSEEUG00000004939THRAP35047.870Erinaceus_europaeus
ENSG00000029363BCLAF19398.587ENSEEUG00000008699BCLAF19491.098Erinaceus_europaeus
ENSG00000029363BCLAF110099.112ENSFCAG00000027614BCLAF110098.934Felis_catus
ENSG00000029363BCLAF19392.494ENSFALG00000012928BCLAF19488.953Ficedula_albicollis
ENSG00000029363BCLAF110097.937ENSFDAG00000021270BCLAF110097.937Fukomys_damarensis
ENSG00000029363BCLAF19392.736ENSGALG00000013935BCLAF19391.066Gallus_gallus
ENSG00000029363BCLAF19391.748ENSGAGG00000023647BCLAF19489.892Gopherus_agassizii
ENSG00000029363BCLAF19488.316ENSGGOG00000042018-8279.895Gorilla_gorilla
ENSG00000029363BCLAF1100100.000ENSGGOG00000001824BCLAF1100100.000Gorilla_gorilla
ENSG00000029363BCLAF110098.225ENSHGLG00000001879BCLAF110097.872Heterocephalus_glaber_female
ENSG00000029363BCLAF110098.225ENSHGLG00100008472BCLAF110097.611Heterocephalus_glaber_male
ENSG00000029363BCLAF110098.537ENSSTOG00000013977BCLAF110098.537Ictidomys_tridecemlineatus
ENSG00000029363BCLAF110098.225ENSJJAG00000011803Bclaf110097.477Jaculus_jaculus
ENSG00000029363BCLAF16155.556ENSLBEG00000017803thrap3b5041.871Labrus_bergylta
ENSG00000029363BCLAF110074.822ENSLACG00000006728BCLAF18362.883Latimeria_chalumnae
ENSG00000029363BCLAF16159.130ENSLACG00000018229THRAP37434.691Latimeria_chalumnae
ENSG00000029363BCLAF19963.158ENSLOCG00000016208BCLAF17465.625Lepisosteus_oculatus
ENSG00000029363BCLAF110097.527ENSLAFG00000015982BCLAF19997.939Loxodonta_africana
ENSG00000029363BCLAF15860.870ENSLAFG00000009587THRAP36539.692Loxodonta_africana
ENSG00000029363BCLAF1100100.000ENSMFAG00000039754BCLAF1100100.000Macaca_fascicularis
ENSG00000029363BCLAF15954.839ENSMFAG00000040144-6539.660Macaca_fascicularis
ENSG00000029363BCLAF1100100.000ENSMMUG00000003710BCLAF1100100.000Macaca_mulatta
ENSG00000029363BCLAF19773.254ENSMMUG00000046285-7891.463Macaca_mulatta
ENSG00000029363BCLAF15954.839ENSMMUG00000014622THRAP36539.660Macaca_mulatta
ENSG00000029363BCLAF110099.867ENSMNEG00000035970BCLAF110099.867Macaca_nemestrina
ENSG00000029363BCLAF16742.969ENSMNEG00000042630-7138.992Macaca_nemestrina
ENSG00000029363BCLAF15954.839ENSMNEG00000018987-6538.605Macaca_nemestrina
ENSG00000029363BCLAF15954.839ENSMLEG00000028924THRAP36539.660Mandrillus_leucophaeus
ENSG00000029363BCLAF110099.867ENSMLEG00000029438BCLAF110099.867Mandrillus_leucophaeus
ENSG00000029363BCLAF19392.476ENSMGAG00000013030BCLAF19489.171Meleagris_gallopavo
ENSG00000029363BCLAF110098.521ENSMAUG00000020380Bclaf110096.851Mesocricetus_auratus
ENSG00000029363BCLAF110099.358ENSMICG00000004946BCLAF110099.358Microcebus_murinus
ENSG00000029363BCLAF16357.724ENSMOCG00000004435-5042.394Microtus_ochrogaster
ENSG00000029363BCLAF110098.287ENSMOCG00000005885Bclaf110098.287Microtus_ochrogaster
ENSG00000029363BCLAF16548.062ENSMMOG00000018587thrap3a5434.690Mola_mola
ENSG00000029363BCLAF19987.081ENSMODG00000017447-9293.595Monodelphis_domestica
ENSG00000029363BCLAF19986.726ENSMODG00000005052-9275.735Monodelphis_domestica
ENSG00000029363BCLAF19999.200MGP_CAROLIEiJ_G0015157Bclaf110094.007Mus_caroli
ENSG00000029363BCLAF15253.731ENSMUSG00000043962Thrap39745.522Mus_musculus
ENSG00000029363BCLAF110098.225ENSMUSG00000037608Bclaf110094.178Mus_musculus
ENSG00000029363BCLAF15253.731MGP_PahariEiJ_G0028802-9744.776Mus_pahari
ENSG00000029363BCLAF110098.225MGP_SPRETEiJ_G0015965Bclaf110096.308Mus_spretus
ENSG00000029363BCLAF110098.371ENSMPUG00000014831BCLAF110098.371Mustela_putorius_furo
ENSG00000029363BCLAF110098.521ENSMLUG00000002343BCLAF110098.158Myotis_lucifugus
ENSG00000029363BCLAF19999.200ENSNGAG00000016813Bclaf110097.611Nannospalax_galili
ENSG00000029363BCLAF16352.893ENSNBRG00000014237thrap3b5041.425Neolamprologus_brichardi
ENSG00000029363BCLAF18684.868ENSNLEG00000028319-7883.906Nomascus_leucogenys
ENSG00000029363BCLAF1100100.000ENSNLEG00000014796BCLAF1100100.000Nomascus_leucogenys
ENSG00000029363BCLAF18498.592ENSMEUG00000013217BCLAF18598.611Notamacropus_eugenii
ENSG00000029363BCLAF17797.222ENSOPRG00000012771BCLAF16897.238Ochotona_princeps
ENSG00000029363BCLAF16394.545ENSODEG00000000384-6994.545Octodon_degus
ENSG00000029363BCLAF110098.225ENSODEG00000006806-10097.394Octodon_degus
ENSG00000029363BCLAF19986.538ENSOANG00000009444BCLAF19394.431Ornithorhynchus_anatinus
ENSG00000029363BCLAF17578.652ENSOCUG00000007115-8673.684Oryctolagus_cuniculus
ENSG00000029363BCLAF110097.937ENSOCUG00000016363-10097.937Oryctolagus_cuniculus
ENSG00000029363BCLAF16636.641ENSOMEG00000019164thrap3a5035.202Oryzias_melastigma
ENSG00000029363BCLAF110098.485ENSOGAG00000009724BCLAF19998.478Otolemur_garnettii
ENSG00000029363BCLAF110097.941ENSOARG00000000096BCLAF110097.941Ovis_aries
ENSG00000029363BCLAF110099.866ENSPPAG00000031645BCLAF110099.866Pan_paniscus
ENSG00000029363BCLAF19392.388ENSPPAG00000029536-9391.468Pan_paniscus
ENSG00000029363BCLAF110099.112ENSPPRG00000023156-10098.404Panthera_pardus
ENSG00000029363BCLAF18482.828ENSPPRG00000003806-8587.500Panthera_pardus
ENSG00000029363BCLAF110099.112ENSPTIG00000019385BCLAF110098.271Panthera_tigris_altaica
ENSG00000029363BCLAF1100100.000ENSPTRG00000018635BCLAF1100100.000Pan_troglodytes
ENSG00000029363BCLAF19692.459ENSPTRG00000049886-9486.390Pan_troglodytes
ENSG00000029363BCLAF15954.839ENSPANG00000010532THRAP36539.660Papio_anubis
ENSG00000029363BCLAF1100100.000ENSPANG00000022182BCLAF1100100.000Papio_anubis
ENSG00000029363BCLAF17887.931ENSPANG00000033308-8487.709Papio_anubis
ENSG00000029363BCLAF19391.525ENSPSIG00000007141BCLAF19489.528Pelodiscus_sinensis
ENSG00000029363BCLAF19293.881ENSPEMG00000012755-9294.015Peromyscus_maniculatus_bairdii
ENSG00000029363BCLAF18895.400ENSPCIG00000017609-8794.915Phascolarctos_cinereus
ENSG00000029363BCLAF16848.507ENSPFOG00000000525thrap3b5039.140Poecilia_formosa
ENSG00000029363BCLAF16848.507ENSPLAG00000016521thrap3b5039.140Poecilia_latipinna
ENSG00000029363BCLAF16848.872ENSPMEG00000009021thrap3b5039.224Poecilia_mexicana
ENSG00000029363BCLAF15954.839ENSPPYG00000001544-7146.535Pongo_abelii
ENSG00000029363BCLAF110099.674ENSPPYG00000017032BCLAF110099.674Pongo_abelii
ENSG00000029363BCLAF110096.556ENSPCAG00000012422BCLAF110096.938Procavia_capensis
ENSG00000029363BCLAF110099.358ENSPCOG00000014683BCLAF110099.358Propithecus_coquereli
ENSG00000029363BCLAF19494.161ENSPVAG00000007233BCLAF110096.000Pteropus_vampyrus
ENSG00000029363BCLAF16353.333ENSPNYG00000003062thrap3b5241.163Pundamilia_nyererei
ENSG00000029363BCLAF19897.581ENSRNOG00000058050Mtfr29495.617Rattus_norvegicus
ENSG00000029363BCLAF1100100.000ENSRBIG00000029072BCLAF1100100.000Rhinopithecus_bieti
ENSG00000029363BCLAF15954.839ENSRBIG00000031284THRAP36537.307Rhinopithecus_bieti
ENSG00000029363BCLAF17883.333ENSRBIG00000044847-8284.906Rhinopithecus_bieti
ENSG00000029363BCLAF1100100.000ENSRROG00000040259BCLAF1100100.000Rhinopithecus_roxellana
ENSG00000029363BCLAF15954.839ENSRROG00000028592THRAP36539.660Rhinopithecus_roxellana
ENSG00000029363BCLAF1100100.000ENSSBOG00000033973BCLAF110099.867Saimiri_boliviensis_boliviensis
ENSG00000029363BCLAF19395.415ENSSHAG00000010721BCLAF19395.129Sarcophilus_harrisii
ENSG00000029363BCLAF19851.659ENSSFOG00015017853bclaf17440.061Scleropages_formosus
ENSG00000029363BCLAF110098.521ENSSARG00000010591BCLAF18598.521Sorex_araneus
ENSG00000029363BCLAF19393.462ENSSPUG00000012092BCLAF19490.219Sphenodon_punctatus
ENSG00000029363BCLAF16551.908ENSSPAG00000009248thrap3b7258.333Stegastes_partitus
ENSG00000029363BCLAF16052.239ENSSSCG00000029954THRAP35461.224Sus_scrofa
ENSG00000029363BCLAF110098.789ENSSSCG00000004163BCLAF110098.371Sus_scrofa
ENSG00000029363BCLAF19392.476ENSTGUG00000010835BCLAF19488.940Taeniopygia_guttata
ENSG00000029363BCLAF110098.225ENSTBEG00000014886BCLAF19491.098Tupaia_belangeri
ENSG00000029363BCLAF110099.112ENSTTRG00000002543BCLAF110098.480Tursiops_truncatus
ENSG00000029363BCLAF19999.112ENSUAMG00000006413BCLAF19598.152Ursus_americanus
ENSG00000029363BCLAF110099.112ENSUMAG00000024012BCLAF110098.271Ursus_maritimus
ENSG00000029363BCLAF16035.830ENSVPAG00000004656THRAP36435.043Vicugna_pacos
ENSG00000029363BCLAF19988.517ENSVPAG00000003924BCLAF18494.952Vicugna_pacos
ENSG00000029363BCLAF19998.291ENSVVUG00000000623BCLAF19998.291Vulpes_vulpes
ENSG00000029363BCLAF19168.085ENSXETG00000033794bclaf18158.073Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003677DNA binding10330179.IDAFunction
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005515protein binding10837489.15009215.23541952.IPIFunction
GO:0005634nucleus10330179.IDAComponent
GO:0005654nucleoplasm24100041.IDAComponent
GO:0005737cytoplasm-IEAComponent
GO:0006915apoptotic process10330179.TASProcess
GO:0016607nuclear speck24100041.IDAComponent
GO:0043065positive regulation of apoptotic process10330179.IDAProcess
GO:0043620regulation of DNA-templated transcription in response to stress17938203.IMPProcess
GO:0045892negative regulation of transcription, DNA-templated10330179.IDAProcess
GO:0045892negative regulation of transcription, DNA-templated10330179.TASProcess
GO:1990830cellular response to leukemia inhibitory factor-IEAProcess
GO:2000144positive regulation of DNA-templated transcription, initiation17938203.IMPProcess
GO:2001022positive regulation of response to DNA damage stimulus17938203.IMPProcess
GO:2001244positive regulation of intrinsic apoptotic signaling pathway17938203.IMPProcess

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