EuRBPDB

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  • Description
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Gene Ontology
Description
Ensembl ID
ENSG00000038219 (Gene tree)
Gene ID
259282
Gene Symbol
BOD1L1
Alias
FLJ33215|KIAA1327|FAM44A|BOD1L
Full Name
biorientation of chromosomes in cell division 1 like 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
58,986 bases
Position
chr4:13,568,738-13,627,723
Accession
31792
RBP type
non-canonical RBP
Summary
(Biorientation Of Chromosomes In Cell Division 1 Like 1) is a Protein Coding gene. An important paralog of this gene is BOD1.
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000511119BOD1L1-2062049--- (aa)--
ENST00000509897BOD1L1-205190--- (aa)--
ENST00000505343BOD1L1-2031202--- (aa)--
ENST00000482713BOD1L1-2024367-ENSP0000042054193 (aa)-F8WDD0
ENST00000507943BOD1L1-2041128-ENSP00000425492207 (aa)-H0Y9Y2
ENST00000040738BOD1L1-20110565XM_005248150ENSP000000407383051 (aa)XP_005248207Q8NFC6
Gene Model
Click here to download ENSG00000038219's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000038219Cell Survival2E-727047539
ENSG00000038219Ovarian Neoplasms2E-727047539
ENSG00000038219Paclitaxel2E-727047539
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000038219rs185229225413607505?Response to paclitaxel in ovarian cancer (MTT IC50)27047539EFO_0001075|EFO_0006952|GO_1901555
ENSG00000038219rs7661090413570277?Age at menopause30595370EFO_0004704
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000038219's network

* RBP PPI network refers to all genes directly bind to RBP
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005654nucleoplasm-IDAComponent
GO:0005694chromosome-IEAComponent
GO:0006281DNA repair-IEAProcess
GO:0006974cellular response to DNA damage stimulus26166705.IDAProcess
GO:0031297replication fork processing26166705.IDAProcess

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