EuRBPDB

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000039123 (Gene tree)
Gene ID: 23517
Gene Symbol: MTREX
Alias: Mtr4|Dob1|fSAP118|KIAA0052|SKIV2L2
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 117,834 bases
Position: chr5:55,307,748-55,425,581
Accession: 18734
RBP type: canonical RBP
Summary: (Mtr4 Exosome RNA Helicase) is a Protein Coding gene. Among its related pathways are mRNA Splicing - Major Pathway and Gene Expression. An important paralog of this gene is SKIV2L.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000230640	rRNA_proc-arch	PF13234.6	7.4e-87	1	1
ENSP00000230640	DEAD	PF00270.29	1.7e-16	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
19070634	Identification and characterization of nuclear non-canonical poly(A) polymerases from Trypanosoma brucei.	Mol Biochem Parasitol	2009 Mar	Etheridge RD	doi: 10.1016/j.molbiopara.2008.11.004
21878619	Air1 zinc knuckles 4 and 5 and a conserved IWRXY motif are critical for the function and integrity of the Trf4/5-Air1/2-Mtr4 polyadenylation (TRAMP) RNA quality control complex.	J Biol Chem	2011 Oct 28	Fasken MB	doi: 10.1074/jbc.M111.271494
21467735	Localization of a novel RNA-binding protein, SKIV2L2, to the nucleus in the round spermatids of mice.	J Reprod Dev	2011 Sep	Osman BA	-
29844170	Structural basis for MTR4-ZCCHC8 interactions that stimulate the MTR4 helicase in the nuclear exosome-targeting complex.	Proc Natl Acad Sci U S A	2018 Jun 12	Puno MR	doi: 10.1073/pnas.1803530115
28190770	Nuclear RNA Decay Pathways Aid Rapid Remodeling of Gene Expression in Yeast.	Mol Cell	2017 Mar 2	Bresson S	doi: 10.1016/j.molcel.2017.01.005

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000502953	MTREX-202	557	-	-	- (aa)	-	-
ENST00000503165	MTREX-203	571	-	-	- (aa)	-	-
ENST00000506750	MTREX-207	3271	-	ENSP00000425042	89 (aa)	-	D6REC7
ENST00000504997	MTREX-205	500	-	-	- (aa)	-	-
ENST00000230640	MTREX-201	4192	-	ENSP00000230640	1042 (aa)	-	P42285
ENST00000505565	MTREX-206	695	-	ENSP00000422125	88 (aa)	-	H0Y8U3
ENST00000504388	MTREX-204	590	-	-	- (aa)	-	-
ENST00000508716	MTREX-208	2185	-	ENSP00000426641	72 (aa)	-	H0YAC4
ENST00000518955	MTREX-209	660	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000039123's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000039123's network

* RBP PPI network refers to all genes directly bind to RBP

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSG00000039123	MTREX	91	36.166	ENSG00000204351	SKIV2L	90	31.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000039123	MTREX	100	83.143	ENSAPOG00000007814	mtrex	100	83.111	Acanthochromis_polyacanthus
ENSG00000039123	MTREX	100	98.562	ENSAMEG00000013856	MTREX	100	98.562	Ailuropoda_melanoleuca
ENSG00000039123	MTREX	91	87.879	ENSACIG00000015117	mtrex	96	87.879	Amphilophus_citrinellus
ENSG00000039123	MTREX	100	83.143	ENSAOCG00000011884	mtrex	100	83.143	Amphiprion_ocellaris
ENSG00000039123	MTREX	100	83.048	ENSAPEG00000019384	mtrex	100	83.048	Amphiprion_percula
ENSG00000039123	MTREX	100	83.794	ENSATEG00000015117	mtrex	100	83.794	Anabas_testudineus
ENSG00000039123	MTREX	95	92.821	ENSAPLG00000009694	MTREX	99	92.821	Anas_platyrhynchos
ENSG00000039123	MTREX	100	90.979	ENSACAG00000015200	MTREX	96	90.787	Anolis_carolinensis
ENSG00000039123	MTREX	100	99.232	ENSANAG00000023095	MTREX	100	99.232	Aotus_nancymaae
ENSG00000039123	MTREX	100	82.459	ENSACLG00000001921	mtrex	100	82.459	Astatotilapia_calliptera
ENSG00000039123	MTREX	97	81.631	ENSAMXG00000018751	mtrex	99	83.835	Astyanax_mexicanus
ENSG00000039123	MTREX	100	98.464	ENSBTAG00000010518	MTREX	100	98.464	Bos_taurus
ENSG00000039123	MTREX	93	61.194	WBGene00012342	mtr-4	97	52.324	Caenorhabditis_elegans
ENSG00000039123	MTREX	100	98.092	ENSCJAG00000001773	MTREX	100	98.092	Callithrix_jacchus
ENSG00000039123	MTREX	100	98.848	ENSCAFG00000006818	MTREX	100	98.848	Canis_familiaris
ENSG00000039123	MTREX	100	98.848	ENSCAFG00020024352	MTREX	100	98.848	Canis_lupus_dingo
ENSG00000039123	MTREX	100	98.464	ENSCHIG00000024413	MTREX	100	98.464	Capra_hircus
ENSG00000039123	MTREX	94	98.205	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSG00000039123	MTREX	85	100.000	ENSCAPG00000008696	MTREX	100	73.848	Cavia_aperea
ENSG00000039123	MTREX	100	98.081	ENSCPOG00000009797	MTREX	100	98.081	Cavia_porcellus
ENSG00000039123	MTREX	100	99.136	ENSCCAG00000014177	MTREX	100	99.136	Cebus_capucinus
ENSG00000039123	MTREX	100	99.520	ENSCATG00000042153	MTREX	100	99.520	Cercocebus_atys
ENSG00000039123	MTREX	100	97.985	ENSCLAG00000006622	MTREX	100	97.985	Chinchilla_lanigera
ENSG00000039123	MTREX	100	94.928	ENSCSAG00000016445	MTREX	100	94.928	Chlorocebus_sabaeus
ENSG00000039123	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSG00000039123	MTREX	100	92.138	ENSCPBG00000026551	MTREX	94	92.138	Chrysemys_picta_bellii
ENSG00000039123	MTREX	99	66.444	ENSCING00000003239	-	99	66.252	Ciona_intestinalis
ENSG00000039123	MTREX	99	65.396	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSG00000039123	MTREX	100	99.424	ENSCANG00000035770	MTREX	100	99.424	Colobus_angolensis_palliatus
ENSG00000039123	MTREX	100	97.889	ENSCGRG00001024680	Mtrex	100	97.889	Cricetulus_griseus_chok1gshd
ENSG00000039123	MTREX	100	97.889	ENSCGRG00000000307	Mtrex	100	97.889	Cricetulus_griseus_crigri
ENSG00000039123	MTREX	100	81.853	ENSCSEG00000018621	mtrex	98	81.853	Cynoglossus_semilaevis
ENSG00000039123	MTREX	100	83.381	ENSCVAG00000004556	mtrex	100	83.381	Cyprinodon_variegatus
ENSG00000039123	MTREX	100	84.909	ENSDARG00000013457	mtrex	100	84.681	Danio_rerio
ENSG00000039123	MTREX	100	97.132	ENSDNOG00000015375	MTREX	100	97.132	Dasypus_novemcinctus
ENSG00000039123	MTREX	100	98.177	ENSDORG00000006782	Mtrex	100	98.177	Dipodomys_ordii
ENSG00000039123	MTREX	85	77.049	FBgn0001986	Mtr4	92	65.886	Drosophila_melanogaster
ENSG00000039123	MTREX	90	80.468	ENSETEG00000000727	MTREX	90	80.468	Echinops_telfairi
ENSG00000039123	MTREX	99	74.206	ENSEBUG00000012869	mtrex	99	73.614	Eptatretus_burgeri
ENSG00000039123	MTREX	100	98.081	ENSEASG00005013270	MTREX	100	98.081	Equus_asinus_asinus
ENSG00000039123	MTREX	100	98.177	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSG00000039123	MTREX	98	88.390	ENSEEUG00000000527	MTREX	100	88.390	Erinaceus_europaeus
ENSG00000039123	MTREX	98	85.063	ENSELUG00000004898	mtrex	100	89.496	Esox_lucius
ENSG00000039123	MTREX	100	98.464	ENSFCAG00000010575	MTREX	100	98.464	Felis_catus
ENSG00000039123	MTREX	100	90.115	ENSFALG00000010850	MTREX	100	90.019	Ficedula_albicollis
ENSG00000039123	MTREX	100	97.889	ENSFDAG00000011199	MTREX	100	97.889	Fukomys_damarensis
ENSG00000039123	MTREX	100	83.508	ENSFHEG00000023014	mtrex	100	82.224	Fundulus_heteroclitus
ENSG00000039123	MTREX	100	79.389	ENSGMOG00000014702	mtrex	100	79.676	Gadus_morhua
ENSG00000039123	MTREX	100	90.979	ENSGALG00000014709	MTREX	86	90.979	Gallus_gallus
ENSG00000039123	MTREX	100	83.413	ENSGAFG00000012425	mtrex	98	87.293	Gambusia_affinis
ENSG00000039123	MTREX	100	79.028	ENSGACG00000016260	mtrex	96	85.217	Gasterosteus_aculeatus
ENSG00000039123	MTREX	100	91.946	ENSGAGG00000020036	MTREX	100	91.563	Gopherus_agassizii
ENSG00000039123	MTREX	100	99.904	ENSGGOG00000001867	MTREX	100	99.904	Gorilla_gorilla
ENSG00000039123	MTREX	100	82.459	ENSHBUG00000006229	mtrex	100	82.459	Haplochromis_burtoni
ENSG00000039123	MTREX	100	97.985	ENSHGLG00000019445	SKIV2L2	100	97.985	Heterocephalus_glaber_female
ENSG00000039123	MTREX	100	97.985	ENSHGLG00100011833	SKIV2L2	100	97.985	Heterocephalus_glaber_male
ENSG00000039123	MTREX	85	91.803	ENSHCOG00000019995	mtrex	100	84.929	Hippocampus_comes
ENSG00000039123	MTREX	100	85.196	ENSIPUG00000024348	skiv2l2	100	85.086	Ictalurus_punctatus
ENSG00000039123	MTREX	100	98.656	ENSSTOG00000010802	MTREX	100	98.656	Ictidomys_tridecemlineatus
ENSG00000039123	MTREX	100	90.307	ENSJJAG00000020975	Mtrex	100	90.979	Jaculus_jaculus
ENSG00000039123	MTREX	100	82.650	ENSKMAG00000012642	mtrex	100	82.555	Kryptolebias_marmoratus
ENSG00000039123	MTREX	100	83.333	ENSLBEG00000019367	mtrex	99	86.236	Labrus_bergylta
ENSG00000039123	MTREX	100	88.602	ENSLACG00000009075	MTREX	100	88.157	Latimeria_chalumnae
ENSG00000039123	MTREX	100	87.452	ENSLOCG00000010186	mtrex	100	87.069	Lepisosteus_oculatus
ENSG00000039123	MTREX	99	95.969	ENSLAFG00000010497	MTREX	100	95.969	Loxodonta_africana
ENSG00000039123	MTREX	100	99.520	ENSMFAG00000031610	MTREX	100	99.520	Macaca_fascicularis
ENSG00000039123	MTREX	100	97.893	ENSMMUG00000010379	MTREX	100	97.893	Macaca_mulatta
ENSG00000039123	MTREX	100	99.520	ENSMNEG00000032746	MTREX	100	99.520	Macaca_nemestrina
ENSG00000039123	MTREX	100	99.520	ENSMLEG00000041051	MTREX	100	99.520	Mandrillus_leucophaeus
ENSG00000039123	MTREX	95	86.072	ENSMAMG00000016753	mtrex	96	88.413	Mastacembelus_armatus
ENSG00000039123	MTREX	100	82.459	ENSMZEG00005000414	mtrex	100	82.459	Maylandia_zebra
ENSG00000039123	MTREX	85	96.721	ENSMGAG00000003980	MTREX	99	67.409	Meleagris_gallopavo
ENSG00000039123	MTREX	100	97.793	ENSMAUG00000010727	Mtrex	100	97.793	Mesocricetus_auratus
ENSG00000039123	MTREX	100	99.328	ENSMICG00000012779	MTREX	100	99.328	Microcebus_murinus
ENSG00000039123	MTREX	100	97.697	ENSMOCG00000019886	Mtrex	100	97.697	Microtus_ochrogaster
ENSG00000039123	MTREX	100	81.679	ENSMMOG00000002476	mtrex	100	81.966	Mola_mola
ENSG00000039123	MTREX	100	93.090	ENSMODG00000019494	MTREX	100	93.474	Monodelphis_domestica
ENSG00000039123	MTREX	92	82.497	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSG00000039123	MTREX	100	97.217	MGP_CAROLIEiJ_G0018896	Mtrex	100	97.217	Mus_caroli
ENSG00000039123	MTREX	100	97.505	ENSMUSG00000016018	Mtrex	100	97.505	Mus_musculus
ENSG00000039123	MTREX	100	97.409	MGP_PahariEiJ_G0015967	Mtrex	100	97.409	Mus_pahari
ENSG00000039123	MTREX	100	97.505	MGP_SPRETEiJ_G0019775	Mtrex	100	97.505	Mus_spretus
ENSG00000039123	MTREX	100	98.848	ENSMPUG00000007619	MTREX	100	98.848	Mustela_putorius_furo
ENSG00000039123	MTREX	100	97.033	ENSMLUG00000001152	MTREX	100	97.033	Myotis_lucifugus
ENSG00000039123	MTREX	100	98.273	ENSNGAG00000011938	Mtrex	100	98.273	Nannospalax_galili
ENSG00000039123	MTREX	100	82.555	ENSNBRG00000011293	mtrex	100	82.555	Neolamprologus_brichardi
ENSG00000039123	MTREX	100	95.690	ENSNLEG00000001494	MTREX	100	95.690	Nomascus_leucogenys
ENSG00000039123	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSG00000039123	MTREX	100	82.821	ENSOPRG00000008009	MTREX	100	82.821	Ochotona_princeps
ENSG00000039123	MTREX	100	97.313	ENSODEG00000017234	MTREX	100	97.313	Octodon_degus
ENSG00000039123	MTREX	100	82.364	ENSONIG00000007587	mtrex	100	82.364	Oreochromis_niloticus
ENSG00000039123	MTREX	78	58.571	ENSOANG00000021855	-	99	84.138	Ornithorhynchus_anatinus
ENSG00000039123	MTREX	100	98.752	ENSOCUG00000004463	MTREX	100	98.752	Oryctolagus_cuniculus
ENSG00000039123	MTREX	100	82.459	ENSORLG00000005443	mtrex	100	82.269	Oryzias_latipes
ENSG00000039123	MTREX	100	82.364	ENSORLG00020006329	mtrex	100	82.173	Oryzias_latipes_hni
ENSG00000039123	MTREX	100	82.364	ENSORLG00015012924	mtrex	100	82.173	Oryzias_latipes_hsok
ENSG00000039123	MTREX	100	81.749	ENSOMEG00000008825	mtrex	100	81.559	Oryzias_melastigma
ENSG00000039123	MTREX	100	98.752	ENSOGAG00000002886	MTREX	100	98.752	Otolemur_garnettii
ENSG00000039123	MTREX	100	98.182	ENSOARG00000007764	MTREX	100	98.182	Ovis_aries
ENSG00000039123	MTREX	100	99.808	ENSPPAG00000039291	MTREX	100	99.808	Pan_paniscus
ENSG00000039123	MTREX	100	98.464	ENSPPRG00000019701	MTREX	100	98.464	Panthera_pardus
ENSG00000039123	MTREX	100	96.929	ENSPTIG00000009313	MTREX	100	96.929	Panthera_tigris_altaica
ENSG00000039123	MTREX	100	99.808	ENSPTRG00000016878	MTREX	100	99.808	Pan_troglodytes
ENSG00000039123	MTREX	100	99.424	ENSPANG00000009697	MTREX	100	99.424	Papio_anubis
ENSG00000039123	MTREX	100	87.011	ENSPKIG00000020833	mtrex	98	88.671	Paramormyrops_kingsleyae
ENSG00000039123	MTREX	100	91.946	ENSPSIG00000012150	MTREX	100	91.946	Pelodiscus_sinensis
ENSG00000039123	MTREX	100	81.125	ENSPMGG00000002582	mtrex	100	81.125	Periophthalmus_magnuspinnatus
ENSG00000039123	MTREX	95	65.562	ENSPMAG00000009668	mtrex	100	65.261	Petromyzon_marinus
ENSG00000039123	MTREX	91	96.621	ENSPCIG00000024730	MTREX	100	96.621	Phascolarctos_cinereus
ENSG00000039123	MTREX	85	88.525	ENSPFOG00000003141	mtrex	100	87.437	Poecilia_formosa
ENSG00000039123	MTREX	100	83.317	ENSPLAG00000021311	mtrex	100	83.413	Poecilia_latipinna
ENSG00000039123	MTREX	91	87.408	ENSPMEG00000010597	mtrex	99	87.723	Poecilia_mexicana
ENSG00000039123	MTREX	100	83.127	ENSPREG00000003089	mtrex	100	83.222	Poecilia_reticulata
ENSG00000039123	MTREX	98	99.902	ENSPPYG00000015469	MTREX	98	99.902	Pongo_abelii
ENSG00000039123	MTREX	85	100.000	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSG00000039123	MTREX	99	93.165	ENSPCOG00000018092	MTREX	100	93.060	Propithecus_coquereli
ENSG00000039123	MTREX	100	98.656	ENSPVAG00000002445	MTREX	100	98.656	Pteropus_vampyrus
ENSG00000039123	MTREX	100	82.364	ENSPNYG00000006164	mtrex	100	82.364	Pundamilia_nyererei
ENSG00000039123	MTREX	100	85.864	ENSPNAG00000008794	mtrex	100	85.864	Pygocentrus_nattereri
ENSG00000039123	MTREX	99	97.376	ENSRNOG00000010125	Mtrex	97	97.376	Rattus_norvegicus
ENSG00000039123	MTREX	100	97.793	ENSRBIG00000034930	MTREX	100	97.793	Rhinopithecus_bieti
ENSG00000039123	MTREX	100	99.520	ENSRROG00000039895	MTREX	100	99.520	Rhinopithecus_roxellana
ENSG00000039123	MTREX	89	55.556	YJL050W	MTR4	89	55.556	Saccharomyces_cerevisiae
ENSG00000039123	MTREX	100	99.040	ENSSBOG00000026693	MTREX	100	99.040	Saimiri_boliviensis_boliviensis
ENSG00000039123	MTREX	96	95.386	ENSSHAG00000004600	MTREX	100	95.386	Sarcophilus_harrisii
ENSG00000039123	MTREX	100	87.380	ENSSFOG00015014355	skiv2l2	100	87.285	Scleropages_formosus
ENSG00000039123	MTREX	100	82.762	ENSSMAG00000007572	mtrex	100	82.650	Scophthalmus_maximus
ENSG00000039123	MTREX	100	83.492	ENSSDUG00000023789	mtrex	100	83.492	Seriola_dumerili
ENSG00000039123	MTREX	100	83.397	ENSSLDG00000006301	mtrex	100	83.302	Seriola_lalandi_dorsalis
ENSG00000039123	MTREX	100	94.530	ENSSARG00000008387	MTREX	100	94.530	Sorex_araneus
ENSG00000039123	MTREX	85	98.361	ENSSPUG00000007071	MTREX	100	79.866	Sphenodon_punctatus
ENSG00000039123	MTREX	91	87.408	ENSSPAG00000011319	mtrex	94	87.828	Stegastes_partitus
ENSG00000039123	MTREX	100	98.656	ENSSSCG00000016911	MTREX	100	98.656	Sus_scrofa
ENSG00000039123	MTREX	100	89.933	ENSTGUG00000002480	MTREX	100	89.933	Taeniopygia_guttata
ENSG00000039123	MTREX	100	82.952	ENSTRUG00000014571	mtrex	100	82.762	Takifugu_rubripes
ENSG00000039123	MTREX	85	100.000	ENSTBEG00000007769	MTREX	100	82.726	Tupaia_belangeri
ENSG00000039123	MTREX	100	98.273	ENSTTRG00000008678	MTREX	100	98.273	Tursiops_truncatus
ENSG00000039123	MTREX	100	98.560	ENSUAMG00000023061	MTREX	100	98.560	Ursus_americanus
ENSG00000039123	MTREX	100	97.989	ENSUMAG00000009373	MTREX	99	99.885	Ursus_maritimus
ENSG00000039123	MTREX	100	87.332	ENSVPAG00000011174	MTREX	100	87.332	Vicugna_pacos
ENSG00000039123	MTREX	100	98.848	ENSVVUG00000021337	MTREX	100	98.848	Vulpes_vulpes
ENSG00000039123	MTREX	100	88.303	ENSXETG00000032798	MTREX	100	88.303	Xenopus_tropicalis
ENSG00000039123	MTREX	100	83.127	ENSXMAG00000004799	mtrex	97	87.370	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000176	nuclear exosome (RNase complex)	26166824.	IDA	Component
GO:0000178	exosome (RNase complex)	11719186.	IDA	Component
GO:0000398	mRNA splicing, via spliceosome	11991638.	IC	Process
GO:0000398	mRNA splicing, via spliceosome	-	TAS	Process
GO:0000460	maturation of 5.8S rRNA	21873635.	IBA	Process
GO:0000460	maturation of 5.8S rRNA	17412707.	IMP	Process
GO:0003723	RNA binding	22658674.	HDA	Function
GO:0004004	ATP-dependent RNA helicase activity	21873635.	IBA	Function
GO:0005515	protein binding	15231747.16263084.16782053.17412707.26166824.26456651.27871484.27905398.29107693.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	16263084.16782053.	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005730	nucleolus	-	IEA	Component
GO:0006364	rRNA processing	29107693.	IMP	Process
GO:0006364	rRNA processing	-	TAS	Process
GO:0006401	RNA catabolic process	21873635.	IBA	Process
GO:0031499	TRAMP complex	21855801.	IDA	Component
GO:0071013	catalytic step 2 spliceosome	11991638.	IDA	Component