EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000043514 (Gene tree)
Gene ID
54802
Gene Symbol
TRIT1
Alias
FLJ20061|IPT
Full Name
tRNA isopentenyltransferase 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
45,402 bases
Position
chr1:39,838,110-39,883,511
Accession
20286
RBP type
canonical RBP
Summary
This gene encodes a protein that that is targeted to the mitochondrion and modifies transfer RNAs (tRNAs) by adding a dimethylallyl group onto the adenine at position 37. This modification is important for maintaining the correct reading frame during protein translation. This gene is considered a tumor suppressor and its expression can decrease cell growth. Alternative splicing results in multiple transcripts variants, most of which are likely non-functional. [provided by RefSeq, Aug 2015]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000321810IPPTPF01715.172.5e-6411
ENSP00000361905IPPTPF01715.176.6e-5711
ENSP00000388333IPPTPF01715.174e-3111
ENSP00000437896zf-C2H2_jazPF12171.87.6e-0611
ENSP00000437700zf-C2H2_jazPF12171.82e-0511
ENSP00000388333zf-C2H2_jazPF12171.86.1e-0511
ENSP00000361905zf-C2H2_jazPF12171.87.4e-0511
ENSP00000321810zf-C2H2_jazPF12171.87.7e-0511
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000372818TRIT1-2022034-ENSP00000361905441 (aa)-Q9H3H1
ENST00000541099TRIT1-215545-ENSP0000043789685 (aa)-Q3T7B4
ENST00000489945TRIT1-210861-ENSP00000473745143 (aa)-B4DK89
ENST00000486825TRIT1-209850-ENSP0000047415181 (aa)-S4R3C5
ENST00000491865TRIT1-211738--- (aa)--
ENST00000462243TRIT1-204550--- (aa)--
ENST00000316891TRIT1-2012112XM_005270954ENSP00000321810467 (aa)XP_005271011Q9H3H1
ENST00000469476TRIT1-208773-ENSP00000474768170 (aa)-S4R3U8
ENST00000465417TRIT1-206499--- (aa)--
ENST00000467774TRIT1-207464--- (aa)--
ENST00000495175TRIT1-2131156-ENSP0000047426463 (aa)-S4R3F4
ENST00000441669TRIT1-2031851XM_006710706ENSP00000388333385 (aa)XP_006710769Q9H3H1
ENST00000537440TRIT1-2142026-ENSP00000437700163 (aa)-Q9H3H1
ENST00000492612TRIT1-212983-ENSP00000473708140 (aa)-S4R2X1
ENST00000462797TRIT1-2052000-ENSP00000473773349 (aa)-S4R2Z0
ENST00000648678TRIT1-2165930-ENSP0000049780572 (aa)--
Gene Model
Click here to download ENSG00000043514's gene model file
Pathways
Pathway IDPathway NameSource
hsa01100Metabolic pathwaysKEGG
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000043514rs3768307139853460?Balding type 130595370EFO_0007825
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000043514's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000043514TRIT19964.535ENSAPOG00000020918trit19362.818Acanthochromis_polyacanthus
ENSG00000043514TRIT19991.716ENSAMEG00000004342TRIT110089.722Ailuropoda_melanoleuca
ENSG00000043514TRIT19963.314ENSACIG00000017409trit19361.187Amphilophus_citrinellus
ENSG00000043514TRIT19963.953ENSAOCG00000009850trit18764.048Amphiprion_ocellaris
ENSG00000043514TRIT19963.953ENSAPEG00000001481trit18764.048Amphiprion_percula
ENSG00000043514TRIT19963.158ENSATEG00000005426trit18860.284Anabas_testudineus
ENSG00000043514TRIT17577.444ENSAPLG00000011421TRIT19568.468Anas_platyrhynchos
ENSG00000043514TRIT19974.556ENSACAG00000002280TRIT18472.222Anolis_carolinensis
ENSG00000043514TRIT19997.633ENSANAG00000030732TRIT110096.574Aotus_nancymaae
ENSG00000043514TRIT19961.628ENSACLG00000004920trit19757.082Astatotilapia_calliptera
ENSG00000043514TRIT19668.657ENSAMXG00000010959trit19859.202Astyanax_mexicanus
ENSG00000043514TRIT19994.675ENSBTAG00000013832TRIT110090.150Bos_taurus
ENSG00000043514TRIT19836.207WBGene00001740gro-19533.810Caenorhabditis_elegans
ENSG00000043514TRIT19997.041ENSCJAG00000002620TRIT110095.717Callithrix_jacchus
ENSG00000043514TRIT19992.941ENSCAFG00000003048TRIT110089.957Canis_familiaris
ENSG00000043514TRIT110089.256ENSCAFG00020003875TRIT110089.256Canis_lupus_dingo
ENSG00000043514TRIT19989.535ENSCHIG00000013259TRIT19988.060Capra_hircus
ENSG00000043514TRIT19991.716ENSTSYG00000004363TRIT110091.688Carlito_syrichta
ENSG00000043514TRIT19880.625ENSCAPG00000017001TRIT19386.351Cavia_aperea
ENSG00000043514TRIT19989.349ENSCPOG00000012820TRIT110086.724Cavia_porcellus
ENSG00000043514TRIT19997.041ENSCCAG00000031271TRIT110095.075Cebus_capucinus
ENSG00000043514TRIT110096.023ENSCATG00000034344TRIT110096.023Cercocebus_atys
ENSG00000043514TRIT19792.754ENSCLAG00000009828TRIT110087.366Chinchilla_lanigera
ENSG00000043514TRIT19999.408ENSCSAG00000001137TRIT110096.107Chlorocebus_sabaeus
ENSG00000043514TRIT19989.349ENSCHOG00000000435TRIT110088.437Choloepus_hoffmanni
ENSG00000043514TRIT17472.500ENSCPBG00000000908-8675.956Chrysemys_picta_bellii
ENSG00000043514TRIT19681.343ENSCPBG00000000888-9074.667Chrysemys_picta_bellii
ENSG00000043514TRIT19946.429ENSCSAVG00000002050-9641.913Ciona_savignyi
ENSG00000043514TRIT19998.817ENSCANG00000043008TRIT110095.503Colobus_angolensis_palliatus
ENSG00000043514TRIT19990.533ENSCGRG00001001894Trit110089.507Cricetulus_griseus_chok1gshd
ENSG00000043514TRIT19990.533ENSCGRG00000007059Trit19189.242Cricetulus_griseus_crigri
ENSG00000043514TRIT19959.770ENSCSEG00000009574trit19259.540Cynoglossus_semilaevis
ENSG00000043514TRIT19552.564ENSCVAG00000016675trit18853.886Cyprinodon_variegatus
ENSG00000043514TRIT19958.333ENSCVAG00000000422trit19559.091Cyprinodon_variegatus
ENSG00000043514TRIT19858.382ENSDARG00000032876trit19961.934Danio_rerio
ENSG00000043514TRIT19789.542ENSDNOG00000001994TRIT110078.598Dasypus_novemcinctus
ENSG00000043514TRIT19688.889ENSDORG00000012449Trit19981.441Dipodomys_ordii
ENSG00000043514TRIT18368.421FBgn0043799CG313817768.421Drosophila_melanogaster
ENSG00000043514TRIT19987.006ENSETEG00000008733TRIT19988.889Echinops_telfairi
ENSG00000043514TRIT18871.429ENSEBUG00000012845trit18271.429Eptatretus_burgeri
ENSG00000043514TRIT19887.500ENSEASG00005000884-10089.593Equus_asinus_asinus
ENSG00000043514TRIT17595.745ENSEASG00005000892-5790.566Equus_asinus_asinus
ENSG00000043514TRIT19889.394ENSECAG00000010597TRIT19289.053Equus_caballus
ENSG00000043514TRIT19284.483ENSEEUG00000009269TRIT110066.947Erinaceus_europaeus
ENSG00000043514TRIT19962.573ENSELUG00000017278trit19054.817Esox_lucius
ENSG00000043514TRIT19992.308ENSFCAG00000006029TRIT110090.578Felis_catus
ENSG00000043514TRIT19979.412ENSFALG00000000532TRIT19477.273Ficedula_albicollis
ENSG00000043514TRIT19787.679ENSFDAG00000003098TRIT19983.298Fukomys_damarensis
ENSG00000043514TRIT18955.769ENSFHEG00000022274trit17279.412Fundulus_heteroclitus
ENSG00000043514TRIT19664.748ENSGMOG00000006522trit19960.780Gadus_morhua
ENSG00000043514TRIT19980.588ENSGALG00000003851TRIT19474.306Gallus_gallus
ENSG00000043514TRIT19567.164ENSGAFG00000018636trit19862.313Gambusia_affinis
ENSG00000043514TRIT19962.147ENSGACG00000008493trit19960.138Gasterosteus_aculeatus
ENSG00000043514TRIT19979.412ENSGAGG00000000522TRIT19775.888Gopherus_agassizii
ENSG00000043514TRIT1100100.000ENSGGOG00000010070TRIT110099.572Gorilla_gorilla
ENSG00000043514TRIT19962.791ENSHBUG00000018999trit19757.511Haplochromis_burtoni
ENSG00000043514TRIT19982.249ENSHGLG00000009564-10078.970Heterocephalus_glaber_female
ENSG00000043514TRIT19990.533ENSHGLG00000010308-9988.889Heterocephalus_glaber_female
ENSG00000043514TRIT18283.582ENSHGLG00100018159-9968.930Heterocephalus_glaber_male
ENSG00000043514TRIT19990.533ENSHGLG00100015382-9988.913Heterocephalus_glaber_male
ENSG00000043514TRIT19960.112ENSHCOG00000006755trit19557.741Hippocampus_comes
ENSG00000043514TRIT19966.279ENSIPUG00000021822trit19560.304Ictalurus_punctatus
ENSG00000043514TRIT19994.083ENSSTOG00000006446TRIT19790.364Ictidomys_tridecemlineatus
ENSG00000043514TRIT19988.757ENSJJAG00000000316-9984.633Jaculus_jaculus
ENSG00000043514TRIT19895.918ENSJJAG00000000300-9981.838Jaculus_jaculus
ENSG00000043514TRIT19963.158ENSKMAG00000021788trit19560.044Kryptolebias_marmoratus
ENSG00000043514TRIT19963.953ENSLBEG00000024262trit18961.253Labrus_bergylta
ENSG00000043514TRIT19966.102ENSLACG00000013861TRIT18965.376Latimeria_chalumnae
ENSG00000043514TRIT19960.227ENSLOCG00000002057trit19559.111Lepisosteus_oculatus
ENSG00000043514TRIT19991.716ENSLAFG00000016876TRIT110088.865Loxodonta_africana
ENSG00000043514TRIT19999.408ENSMFAG00000001316TRIT110096.146Macaca_fascicularis
ENSG00000043514TRIT19999.408ENSMMUG00000016220TRIT110096.146Macaca_mulatta
ENSG00000043514TRIT19999.408ENSMNEG00000023137TRIT110096.146Macaca_nemestrina
ENSG00000043514TRIT19999.408ENSMLEG00000035296TRIT110096.023Mandrillus_leucophaeus
ENSG00000043514TRIT19961.047ENSMAMG00000005868trit19060.839Mastacembelus_armatus
ENSG00000043514TRIT19961.047ENSMZEG00005011506trit19756.867Maylandia_zebra
ENSG00000043514TRIT19980.117ENSMGAG00000005516TRIT19976.344Meleagris_gallopavo
ENSG00000043514TRIT19991.716ENSMAUG00000000399Trit110090.364Mesocricetus_auratus
ENSG00000043514TRIT19995.266ENSMICG00000016294TRIT110092.291Microcebus_murinus
ENSG00000043514TRIT19991.124ENSMOCG00000008173Trit110089.079Microtus_ochrogaster
ENSG00000043514TRIT19964.327ENSMMOG00000021140trit19658.696Mola_mola
ENSG00000043514TRIT19981.250ENSMODG00000017650TRIT19878.049Monodelphis_domestica
ENSG00000043514TRIT19960.465ENSMALG00000017843trit19357.788Monopterus_albus
ENSG00000043514TRIT19991.716MGP_CAROLIEiJ_G0026428Trit110089.079Mus_caroli
ENSG00000043514TRIT19991.716ENSMUSG00000028653Trit110089.293Mus_musculus
ENSG00000043514TRIT19791.988MGP_PahariEiJ_G0028758Trit110088.651Mus_pahari
ENSG00000043514TRIT19991.124MGP_SPRETEiJ_G0027408Trit110089.293Mus_spretus
ENSG00000043514TRIT19992.353ENSMPUG00000014291TRIT110089.957Mustela_putorius_furo
ENSG00000043514TRIT19991.124ENSMLUG00000000334TRIT19987.339Myotis_lucifugus
ENSG00000043514TRIT19963.690ENSNBRG00000020509trit19764.205Neolamprologus_brichardi
ENSG00000043514TRIT110098.715ENSNLEG00000012038TRIT110098.715Nomascus_leucogenys
ENSG00000043514TRIT19088.095ENSMEUG00000005217TRIT19969.783Notamacropus_eugenii
ENSG00000043514TRIT19286.207ENSOPRG00000003205-6283.333Ochotona_princeps
ENSG00000043514TRIT19788.563ENSODEG00000006117TRIT110084.713Octodon_degus
ENSG00000043514TRIT19960.452ENSONIG00000015407trit19956.540Oreochromis_niloticus
ENSG00000043514TRIT19978.235ENSOANG00000002779TRIT19675.597Ornithorhynchus_anatinus
ENSG00000043514TRIT19991.716ENSOCUG00000002054TRIT110091.006Oryctolagus_cuniculus
ENSG00000043514TRIT19967.251ENSORLG00000005802trit19262.884Oryzias_latipes
ENSG00000043514TRIT19966.667ENSORLG00020005519trit19262.648Oryzias_latipes_hni
ENSG00000043514TRIT19965.497ENSORLG00015018715trit19261.882Oryzias_latipes_hsok
ENSG00000043514TRIT19967.262ENSOMEG00000006569trit19660.850Oryzias_melastigma
ENSG00000043514TRIT110091.228ENSOGAG00000009571TRIT110088.889Otolemur_garnettii
ENSG00000043514TRIT19992.941ENSOARG00000020140TRIT19989.293Ovis_aries
ENSG00000043514TRIT1100100.000ENSPPAG00000023930TRIT110099.786Pan_paniscus
ENSG00000043514TRIT19992.899ENSPPRG00000009680TRIT110091.006Panthera_pardus
ENSG00000043514TRIT19992.899ENSPTIG00000021134TRIT110091.006Panthera_tigris_altaica
ENSG00000043514TRIT1100100.000ENSPTRG00000000579TRIT110099.786Pan_troglodytes
ENSG00000043514TRIT19999.408ENSPANG00000018125TRIT110095.931Papio_anubis
ENSG00000043514TRIT19961.310ENSPKIG00000024527trit19659.091Paramormyrops_kingsleyae
ENSG00000043514TRIT19943.787ENSPSIG00000017073TRIT19957.103Pelodiscus_sinensis
ENSG00000043514TRIT19964.286ENSPMGG00000018445trit19859.852Periophthalmus_magnuspinnatus
ENSG00000043514TRIT19992.899ENSPEMG00000022418Trit110090.578Peromyscus_maniculatus_bairdii
ENSG00000043514TRIT19964.000ENSPMAG00000008892trit110056.642Petromyzon_marinus
ENSG00000043514TRIT19982.955ENSPCIG00000020666TRIT19781.525Phascolarctos_cinereus
ENSG00000043514TRIT19961.047ENSPFOG00000014626trit19458.744Poecilia_formosa
ENSG00000043514TRIT19961.310ENSPLAG00000011669trit19462.614Poecilia_latipinna
ENSG00000043514TRIT19961.310ENSPMEG00000023788trit19662.121Poecilia_mexicana
ENSG00000043514TRIT19650.314ENSPMEG00000023796trit18852.062Poecilia_mexicana
ENSG00000043514TRIT19466.917ENSPREG00000018182trit19662.682Poecilia_reticulata
ENSG00000043514TRIT19999.408ENSPPYG00000001499TRIT110097.430Pongo_abelii
ENSG00000043514TRIT19780.380ENSPCAG00000014680TRIT110074.586Procavia_capensis
ENSG00000043514TRIT19994.083ENSPCOG00000014150TRIT19992.241Propithecus_coquereli
ENSG00000043514TRIT19886.250ENSPVAG00000003344TRIT110079.657Pteropus_vampyrus
ENSG00000043514TRIT19962.209ENSPNYG00000001003trit19961.613Pundamilia_nyererei
ENSG00000043514TRIT19468.148ENSPNAG00000009466trit19363.315Pygocentrus_nattereri
ENSG00000043514TRIT110086.364ENSRNOG00000014274Trit110085.863Rattus_norvegicus
ENSG00000043514TRIT19999.408ENSRBIG00000043179TRIT110095.503Rhinopithecus_bieti
ENSG00000043514TRIT19999.408ENSRROG00000042670TRIT110095.503Rhinopithecus_roxellana
ENSG00000043514TRIT19838.690YOR274W-9535.035Saccharomyces_cerevisiae
ENSG00000043514TRIT19998.225ENSSBOG00000024417TRIT110096.000Saimiri_boliviensis_boliviensis
ENSG00000043514TRIT19986.047ENSSHAG00000018363TRIT19977.698Sarcophilus_harrisii
ENSG00000043514TRIT19958.929ENSSFOG00015007284trit18061.728Scleropages_formosus
ENSG00000043514TRIT19668.657ENSSMAG00000020730trit19061.916Scophthalmus_maximus
ENSG00000043514TRIT19962.791ENSSDUG00000001683trit18562.439Seriola_dumerili
ENSG00000043514TRIT19961.628ENSSLDG00000008379trit18561.951Seriola_lalandi_dorsalis
ENSG00000043514TRIT19989.266ENSSARG00000004540TRIT110086.526Sorex_araneus
ENSG00000043514TRIT19973.373ENSSPUG00000003472TRIT17972.396Sphenodon_punctatus
ENSG00000043514TRIT19965.476ENSSPAG00000020745trit19561.593Stegastes_partitus
ENSG00000043514TRIT19882.822ENSSSCG00000003667-10085.268Sus_scrofa
ENSG00000043514TRIT19277.564ENSTGUG00000001242TRIT110072.872Taeniopygia_guttata
ENSG00000043514TRIT19963.372ENSTRUG00000013936trit19660.045Takifugu_rubripes
ENSG00000043514TRIT19963.158ENSTNIG00000009240trit19560.698Tetraodon_nigroviridis
ENSG00000043514TRIT19885.625ENSTBEG00000001317TRIT18191.509Tupaia_belangeri
ENSG00000043514TRIT19992.899ENSTTRG00000005064TRIT110090.364Tursiops_truncatus
ENSG00000043514TRIT19987.574ENSUAMG00000000522-9988.561Ursus_americanus
ENSG00000043514TRIT19885.625ENSUAMG00000000509-9887.755Ursus_americanus
ENSG00000043514TRIT19991.124ENSUMAG00000017299TRIT19089.507Ursus_maritimus
ENSG00000043514TRIT19991.124ENSVPAG00000003008TRIT19984.120Vicugna_pacos
ENSG00000043514TRIT15693.299ENSVVUG00000005208-9790.547Vulpes_vulpes
ENSG00000043514TRIT15781.915ENSVVUG00000005200-8681.915Vulpes_vulpes
ENSG00000043514TRIT18680.992ENSXETG00000010952trit19266.194Xenopus_tropicalis
ENSG00000043514TRIT15867.901ENSXCOG00000001950-9965.116Xiphophorus_couchianus
ENSG00000043514TRIT19466.165ENSXMAG00000016302trit19163.253Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003676nucleic acid binding-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005575cellular_component-NDComponent
GO:0005739mitochondrion21873635.IBAComponent
GO:0005759mitochondrial matrix-TASComponent
GO:0006400tRNA modification21873635.IBAProcess
GO:0008270zinc ion binding-IEAFunction
GO:0052381tRNA dimethylallyltransferase activity24901367.EXPFunction
GO:0052381tRNA dimethylallyltransferase activity21873635.IBAFunction
GO:0052381tRNA dimethylallyltransferase activity11111046.TASFunction
GO:0070900mitochondrial tRNA modification-TASProcess

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