Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000554805 | SYNE2-213 | 3481 | - | - | - (aa) | - | - |
ENST00000554997 | SYNE2-215 | 711 | - | - | - (aa) | - | - |
ENST00000557024 | SYNE2-224 | 998 | - | - | - (aa) | - | - |
ENST00000554584 | SYNE2-212 | 20508 | - | ENSP00000452570 | 6818 (aa) | - | G3V5X4 |
ENST00000557005 | SYNE2-223 | 5804 | - | - | - (aa) | - | - |
ENST00000557060 | SYNE2-225 | 3203 | - | - | - (aa) | - | - |
ENST00000555002 | SYNE2-216 | 11532 | - | ENSP00000450831 | 3541 (aa) | - | A0A0C4DGK3 |
ENST00000555022 | SYNE2-217 | 3396 | - | - | - (aa) | - | - |
ENST00000557307 | SYNE2-227 | 526 | - | - | - (aa) | - | - |
ENST00000553289 | SYNE2-208 | 5261 | - | ENSP00000451184 | 607 (aa) | - | G3V3D4 |
ENST00000553801 | SYNE2-211 | 536 | - | ENSP00000492590 | 16 (aa) | - | A0A1W2PS37 |
ENST00000554928 | SYNE2-214 | 1048 | - | - | - (aa) | - | - |
ENST00000553455 | SYNE2-210 | 674 | - | ENSP00000452434 | 214 (aa) | - | G3V5N1 |
ENST00000553308 | SYNE2-209 | 557 | - | - | - (aa) | - | - |
ENST00000357395 | SYNE2-203 | 21555 | - | ENSP00000349969 | 6824 (aa) | - | A0A0A0MRE3 |
ENST00000341472 | SYNE2-201 | 1132 | - | ENSP00000344528 | 285 (aa) | - | Q8WXH0 |
ENST00000358025 | SYNE2-204 | 21842 | XM_005267454 | ENSP00000350719 | 6907 (aa) | XP_005267511 | Q8WXH0 |
ENST00000556342 | SYNE2-221 | 572 | - | - | - (aa) | - | - |
ENST00000557084 | SYNE2-226 | 689 | - | ENSP00000450789 | 199 (aa) | - | G3V2Q0 |
ENST00000344113 | SYNE2-202 | 21777 | XM_005267458 | ENSP00000341781 | 6885 (aa) | XP_005267515 | Q8WXH0 |
ENST00000394768 | SYNE2-205 | 11095 | - | - | - (aa) | - | - |
ENST00000556725 | SYNE2-222 | 672 | - | - | - (aa) | - | - |
ENST00000555612 | SYNE2-220 | 6766 | - | ENSP00000451972 | 1127 (aa) | - | G3V4T3 |
ENST00000458046 | SYNE2-207 | 2669 | XM_017021103 | ENSP00000391937 | 556 (aa) | XP_016876592 | Q8WXH0 |
ENST00000441438 | SYNE2-206 | 3084 | - | - | - (aa) | - | - |
ENST00000555323 | SYNE2-219 | 389 | - | - | - (aa) | - | - |
ENST00000555241 | SYNE2-218 | 665 | - | ENSP00000492588 | 99 (aa) | - | A0A1W2PRN9 |
ENST00000639659 | SYNE2-228 | 1290 | - | ENSP00000492333 | 429 (aa) | - | Q8WXH0 |
ensgID | Trait | pValue | Pubmed ID |
---|---|---|---|
ENSG00000054654 | Hemoglobin A, Glycosylated | 5.6370000E-005 | 19875614 |
ENSG00000054654 | Lymphocyte Count | 9.357e-005 | - |
ENSG00000054654 | Lymphocyte Count | 9.631e-005 | - |
ENSG00000054654 | Lymphocyte Count | 8.561e-005 | - |
ENSG00000054654 | Neutrophils | 4.82e-005 | - |
ENSG00000054654 | Neutrophils | 5.818e-005 | - |
ENSG00000054654 | Neutrophils | 4.424e-005 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 3.9570000E-007 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 2.8275000E-007 | - |
ENSG00000054654 | Autistic Disorder | 4.0461000E-006 | - |
ENSG00000054654 | Autistic Disorder | 3.6392000E-006 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 6.9518000E-006 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 2.3881000E-006 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 1.9115000E-005 | - |
ENSG00000054654 | Autistic Disorder | 1.5146000E-005 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 8.4024000E-006 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 1.0223000E-005 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 9.7627000E-006 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 1.0578000E-005 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 1.6068000E-005 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 5.5000000E-005 | - |
ENSG00000054654 | Child Development Disorders, Pervasive | 4.5000000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.2360000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.7400000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.0030000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.7960000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.4020000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.4230000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.3310000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.7630000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.3890000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.7950000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.8200000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.3620000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.3430000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.2750000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.5100000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.4590000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.4340000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.5170000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.3260000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 1.0810000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 9.2370000E-006 | - |
ENSG00000054654 | Myocardial Infarction | 2.0770000E-005 | - |
ENSG00000054654 | Myocardial Infarction | 2.5970000E-005 | - |
ENSG00000054654 | Atrial Fibrillation | 6E-13 | 22544366 |
ensgID | SNP | Chromosome | Position | SNP-risk | Trait | PubmedID | 95% CI | Or or BEAT | EFO ID |
---|---|---|---|---|---|---|---|---|---|
ENSG00000054654 | rs2738413 | 14 | 64213242 | A | Atrial fibrillation | 30061737 | [1.07-1.10] | 1.08 | EFO_0000275 |
ENSG00000054654 | rs1152595 | 14 | 64208263 | T | Educational attainment (MTAG) | 30038396 | [0.0061-0.0111] unit decrease | 0.0086 | EFO_0004784 |
ENSG00000054654 | rs1152591 | 14 | 64214130 | A | Atrial fibrillation | 28416818 | [1.06-1.13] | 1.09 | EFO_0000275 |
ENSG00000054654 | rs2738413 | 14 | 64213242 | A | Atrial fibrillation | 29892015 | [1.07-1.1] | 1.08 | EFO_0000275 |
ENSG00000054654 | rs2738413 | 14 | 64213242 | A | Atrial fibrillation | 29892015 | [1.06-1.1] | 1.08 | EFO_0000275 |
ENSG00000054654 | rs1152591 | 14 | 64214130 | A | Atrial fibrillation | 22544366 | [1.09-1.17] | 1.13 | EFO_0000275 |
ENSG00000054654 | rs915057 | 14 | 64219489 | G | Depression | 29700475 | [1.02-1.04] | 1.0309278 | EFO_0003761 |
ENSG00000054654 | rs2357176 | 14 | 63942595 | ? | Nevus count or cutaneous melanoma | 30429480 | EFO_0004632|EFO_0000389 | ||
ENSG00000054654 | rs10873172 | 14 | 63923312 | G | Blond vs. brown/black hair color | 30531825 | NR | 1.068 | EFO_0003924 |
ENSG00000054654 | rs148114281 | 14 | 64160241 | ? | Mean corpuscular hemoglobin | 30595370 | EFO_0004527 | ||
ENSG00000054654 | rs10873172 | 14 | 63923312 | ? | Hair color | 30595370 | EFO_0007822 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSG00000054654 | SYNE2 | 100 | 98.990 | ENSMUSG00000063450 | Syne2 | 100 | 96.396 | Mus_musculus |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0003779 | actin binding | - | ISS | Function |
GO:0005515 | protein binding | 15671068.18396275.22555292.22632968.23414517.24880667.26506308. | IPI | Function |
GO:0005634 | nucleus | 12118075. | IDA | Component |
GO:0005635 | nuclear envelope | 15671068. | IDA | Component |
GO:0005640 | nuclear outer membrane | - | IEA | Component |
GO:0005654 | nucleoplasm | - | IEA | Component |
GO:0005737 | cytoplasm | 12118075.15671068. | IDA | Component |
GO:0005739 | mitochondrion | 15671068. | IDA | Component |
GO:0005813 | centrosome | 21873635. | IBA | Component |
GO:0005925 | focal adhesion | 15671068. | IDA | Component |
GO:0007097 | nuclear migration | 20724637. | IMP | Process |
GO:0010457 | centriole-centriole cohesion | 21873635. | IBA | Process |
GO:0016021 | integral component of membrane | - | IEA | Component |
GO:0016235 | aggresome | - | IDA | Component |
GO:0016529 | sarcoplasmic reticulum | 15671068. | IDA | Component |
GO:0021817 | nucleokinesis involved in cell motility in cerebral cortex radial glia guided migration | - | IEA | Process |
GO:0030018 | Z disc | 15671068. | IDA | Component |
GO:0030335 | positive regulation of cell migration | - | ISS | Process |
GO:0031022 | nuclear migration along microfilament | - | ISS | Process |
GO:0031258 | lamellipodium membrane | 15671068. | IDA | Component |
GO:0031527 | filopodium membrane | 15671068. | IDA | Component |
GO:0031965 | nuclear membrane | - | IDA | Component |
GO:0031981 | nuclear lumen | 15671068. | IDA | Component |
GO:0033017 | sarcoplasmic reticulum membrane | - | IEA | Component |
GO:0034993 | meiotic nuclear membrane microtubule tethering complex | 18396275. | IDA | Component |
GO:0045111 | intermediate filament cytoskeleton | - | IDA | Component |
GO:0051015 | actin filament binding | - | IEA | Function |
GO:0051642 | centrosome localization | 20724637. | IMP | Process |
GO:0070062 | extracellular exosome | 18570454. | HDA | Component |
GO:0090286 | cytoskeletal anchoring at nuclear membrane | 18396275. | IDA | Process |
GO:1902017 | regulation of cilium assembly | - | IEA | Process |