EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSG00000069248 (Gene tree)
Gene ID: 55746
Gene Symbol: NUP133
Alias: FLJ10814
Full Name: nucleoporin 133
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 68,082 bases
Position: chr1:229,440,260-229,508,341
Accession: 18016
RBP type: non-canonical RBP
Summary: The nuclear envelope creates distinct nuclear and cytoplasmic compartments in eukaryotic cells. It consists of two concentric membranes perforated by nuclear pores, large protein complexes that form aqueous channels to regulate the flow of macromolecules between the nucleus and the cytoplasm. These complexes are composed of at least 100 different polypeptide subunits, many of which belong to the nucleoporin family. The nucleoporin protein encoded by this gene displays evolutionarily conserved interactions with other nucleoporins. This protein, which localizes to both sides of the nuclear pore complex at interphase, remains associated with the complex during mitosis and is targeted at early stages to the reforming nuclear envelope. This protein also localizes to kinetochores of mitotic cells. [provided by RefSeq, Jul 2008]

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000490352	NUP133-204	643	-	-	- (aa)	-	-
ENST00000366678	NUP133-202	779	-	-	- (aa)	-	-
ENST00000261396	NUP133-201	5207	-	ENSP00000261396	1156 (aa)	-	Q8WUM0
ENST00000485119	NUP133-203	965	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000069248's gene model file

Pathways

Pathway ID	Pathway Name	Source
hsa03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000069248's network

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000777	condensed chromosome kinetochore	21873635.	IBA	Component
GO:0000777	condensed chromosome kinetochore	17098863.	IDA	Component
GO:0000940	condensed chromosome outer kinetochore	17363900.	IDA	Component
GO:0005515	protein binding	11564755.15146057.17363900.24315095.24725412.24947832.26411495.26496610.27194810.	IPI	Function
GO:0005635	nuclear envelope	-	TAS	Component
GO:0005643	nuclear pore	11564755.11684705.17098863.	IDA	Component
GO:0005829	cytosol	-	TAS	Component
GO:0006110	regulation of glycolytic process	-	TAS	Process
GO:0006406	mRNA export from nucleus	11684705.	IDA	Process
GO:0006406	mRNA export from nucleus	-	TAS	Process
GO:0006409	tRNA export from nucleus	-	TAS	Process
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006999	nuclear pore organization	15146057.	IMP	Process
GO:0016020	membrane	19946888.	HDA	Component
GO:0016032	viral process	-	TAS	Process
GO:0016925	protein sumoylation	-	TAS	Process
GO:0017056	structural constituent of nuclear pore	21873635.	IBA	Function
GO:0017056	structural constituent of nuclear pore	11684705.	IDA	Function
GO:0019083	viral transcription	-	TAS	Process
GO:0021915	neural tube development	-	IEA	Process
GO:0022008	neurogenesis	-	IEA	Process
GO:0031080	nuclear pore outer ring	21873635.	IBA	Component
GO:0031080	nuclear pore outer ring	15146057.17360435.	IDA	Component
GO:0031080	nuclear pore outer ring	17363900.	NAS	Component
GO:0031081	nuclear pore distribution	21873635.	IBA	Process
GO:0031965	nuclear membrane	-	IDA	Component
GO:0043657	host cell	-	IEA	Component
GO:0048339	paraxial mesoderm development	-	IEA	Process
GO:0060964	regulation of gene silencing by miRNA	-	TAS	Process
GO:0061053	somite development	-	IEA	Process
GO:0072006	nephron development	30179222.	IMP	Process
GO:0075733	intracellular transport of virus	-	TAS	Process
GO:1900034	regulation of cellular response to heat	-	TAS	Process