EuRBPDB

Description

Ensembl ID: ENSG00000077147 (Gene tree)
Gene ID: 56889
Gene Symbol: TM9SF3
Alias: SMBP
Full Name: transmembrane 9 superfamily member 3
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 69,344 bases
Position: chr10:96,518,109-96,587,452
Accession: 21529
RBP type: non-canonical RBP
Summary: (Transmembrane 9 Superfamily Member 3) is a Protein Coding gene. An important paralog of this gene is TM9SF4.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000464654	TM9SF3-203	658	-	-	- (aa)	-	-
ENST00000371142	TM9SF3-201	6141	XM_011539976	ENSP00000360184	589 (aa)	XP_011538278	Q9HD45
ENST00000475401	TM9SF3-204	511	-	-	- (aa)	-	-
ENST00000443638	TM9SF3-202	868	-	ENSP00000401152	253 (aa)	-	Q5TB53
ENST00000490192	TM9SF3-206	884	-	-	- (aa)	-	-
ENST00000485093	TM9SF3-205	407	-	-	- (aa)	-	-
ENST00000649367	TM9SF3-207	6250	-	-	- (aa)	-	-

Gene Model

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000077147	Hemoglobins	5.99519133331503E-5	17903294
ENSG00000077147	Hemoglobins	5.8694197219335E-5	17903294
ENSG00000077147	C-Reactive Protein	8.729e-005	19060910
ENSG00000077147	Platelet Function Tests	2.8217000E-006	-
ENSG00000077147	Platelet Function Tests	2.3304000E-006	-

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0016020	membrane	21873635.	IBA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0072657	protein localization to membrane	21873635.	IBA	Process