EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000079974 (Gene tree)
Gene ID: 11158
Gene Symbol: RABL2B
Alias: -
Full Name: RAB, member of RAS oncogene family like 2B
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Minus strand
Length: 16,184 bases
Position: chr22:50,767,492-50,783,675
Accession: 9800
RBP type: canonical RBP
Summary: The RABL2B protein is a member of the RAB gene family which belongs to the RAS GTPase superfamily. RABL2B is located within a subtelomeric region of 22q13.3. Multiple alternatively spliced transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Aug 2008]

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000378962	MMR_HSR1	PF01926.23	0.00018	1	1
ENSP00000401906	MMR_HSR1	PF01926.23	0.00018	1	1
ENSP00000346940	MMR_HSR1	PF01926.23	0.00018	1	1
ENSP00000378960	MMR_HSR1	PF01926.23	0.00018	1	1
ENSP00000378958	MMR_HSR1	PF01926.23	0.0002	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000468451	RABL2B-214	561	-	ENSP00000419811	39 (aa)	-	F2Z3A9
ENST00000425098	RABL2B-208	1868	-	ENSP00000399988	101 (aa)	-	F2Z3J7
ENST00000482308	RABL2B-215	552	-	-	- (aa)	-	-
ENST00000464678	RABL2B-211	831	-	-	- (aa)	-	-
ENST00000465063	RABL2B-213	2498	-	-	- (aa)	-	-
ENST00000436958	RABL2B-210	2049	-	ENSP00000398282	101 (aa)	-	F2Z3J7
ENST00000395593	RABL2B-204	2341	XM_017028543	ENSP00000378958	238 (aa)	XP_016884032	Q9UNT1
ENST00000464740	RABL2B-212	612	-	-	- (aa)	-	-
ENST00000395598	RABL2B-206	2169	XM_017028556	ENSP00000378962	228 (aa)	XP_016884045	Q9UNT1
ENST00000413505	RABL2B-207	391	-	ENSP00000415180	20 (aa)	-	C9JFZ0
ENST00000354869	RABL2B-201	2140	XM_024452147	ENSP00000346940	229 (aa)	XP_024307915	Q9UNT1
ENST00000395595	RABL2B-205	2428	XM_017028552	ENSP00000378960	229 (aa)	XP_016884041	Q9UNT1
ENST00000435118	RABL2B-209	1126	-	ENSP00000401906	228 (aa)	-	Q9UNT1
ENST00000395590	RABL2B-202	2380	XM_017028559	ENSP00000378955	99 (aa)	XP_016884048	F2Z2T3
ENST00000395591	RABL2B-203	1987	-	ENSP00000378956	165 (aa)	-	A8MXF6

Gene Model

Click here to download ENSG00000079974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000079974's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000079974	RABL2B	100	80.808	ENSAPOG00000023708	rabl2	99	73.182	Acanthochromis_polyacanthus
ENSG00000079974	RABL2B	100	87.379	ENSAMEG00000003173	-	99	87.111	Ailuropoda_melanoleuca
ENSG00000079974	RABL2B	100	78.788	ENSACIG00000000670	rabl2	92	74.510	Amphilophus_citrinellus
ENSG00000079974	RABL2B	100	81.818	ENSAOCG00000008069	rabl2	99	73.636	Amphiprion_ocellaris
ENSG00000079974	RABL2B	100	80.808	ENSAPEG00000003164	rabl2	99	72.727	Amphiprion_percula
ENSG00000079974	RABL2B	100	81.818	ENSATEG00000001111	rabl2	99	73.636	Anabas_testudineus
ENSG00000079974	RABL2B	91	91.111	ENSACAG00000000418	-	93	85.366	Anolis_carolinensis
ENSG00000079974	RABL2B	100	96.970	ENSANAG00000021001	-	100	94.760	Aotus_nancymaae
ENSG00000079974	RABL2B	100	80.808	ENSACLG00000025632	rabl2	92	77.073	Astatotilapia_calliptera
ENSG00000079974	RABL2B	100	80.808	ENSAMXG00000040611	rabl2	96	77.465	Astyanax_mexicanus
ENSG00000079974	RABL2B	100	93.939	ENSBTAG00000004876	RABL2B	99	85.714	Bos_taurus
ENSG00000079974	RABL2B	100	95.197	ENSCJAG00000018414	-	100	95.197	Callithrix_jacchus
ENSG00000079974	RABL2B	100	91.919	ENSCAFG00020006938	-	99	89.140	Canis_lupus_dingo
ENSG00000079974	RABL2B	100	92.929	ENSCHIG00000000591	-	99	84.716	Capra_hircus
ENSG00000079974	RABL2B	100	91.919	ENSTSYG00000004323	-	100	88.646	Carlito_syrichta
ENSG00000079974	RABL2B	100	93.939	ENSCPOG00000026899	-	98	90.323	Cavia_porcellus
ENSG00000079974	RABL2B	100	96.970	ENSCCAG00000025944	-	100	96.070	Cebus_capucinus
ENSG00000079974	RABL2B	100	94.949	ENSCATG00000034307	-	100	94.760	Cercocebus_atys
ENSG00000079974	RABL2B	100	94.949	ENSCLAG00000017218	-	99	89.593	Chinchilla_lanigera
ENSG00000079974	RABL2B	100	96.970	ENSCSAG00000004698	-	100	95.238	Chlorocebus_sabaeus
ENSG00000079974	RABL2B	91	88.889	ENSCPBG00000011715	-	93	81.043	Chrysemys_picta_bellii
ENSG00000079974	RABL2B	92	63.736	ENSCING00000004961	-	93	62.500	Ciona_intestinalis
ENSG00000079974	RABL2B	81	71.250	ENSCSAVG00000006042	-	89	65.054	Ciona_savignyi
ENSG00000079974	RABL2B	100	94.949	ENSCANG00000030879	-	100	93.886	Colobus_angolensis_palliatus
ENSG00000079974	RABL2B	100	92.929	ENSCGRG00001021894	Rabl2	99	87.783	Cricetulus_griseus_chok1gshd
ENSG00000079974	RABL2B	100	76.768	ENSCSEG00000005479	rabl2	97	73.272	Cynoglossus_semilaevis
ENSG00000079974	RABL2B	92	83.516	ENSCVAG00000011432	rabl2	96	73.585	Cyprinodon_variegatus
ENSG00000079974	RABL2B	92	81.319	ENSDARG00000063321	rabl2	99	74.312	Danio_rerio
ENSG00000079974	RABL2B	100	90.909	ENSDNOG00000035151	-	99	90.498	Dasypus_novemcinctus
ENSG00000079974	RABL2B	100	92.929	ENSDORG00000000003	Rabl2	99	90.498	Dipodomys_ordii
ENSG00000079974	RABL2B	100	91.919	ENSEASG00005008239	-	99	87.783	Equus_asinus_asinus
ENSG00000079974	RABL2B	100	91.919	ENSECAG00000026942	-	99	87.330	Equus_caballus
ENSG00000079974	RABL2B	100	92.929	ENSFCAG00000033642	-	99	89.593	Felis_catus
ENSG00000079974	RABL2B	100	91.919	ENSFDAG00000002113	-	100	85.590	Fukomys_damarensis
ENSG00000079974	RABL2B	100	80.808	ENSFHEG00000015015	rabl2	85	70.796	Fundulus_heteroclitus
ENSG00000079974	RABL2B	100	74.747	ENSGMOG00000018928	rabl2	100	75.635	Gadus_morhua
ENSG00000079974	RABL2B	100	73.737	ENSGALG00000032458	RABL2B	99	76.364	Gallus_gallus
ENSG00000079974	RABL2B	91	83.333	ENSGAFG00000005188	rabl2	95	73.934	Gambusia_affinis
ENSG00000079974	RABL2B	100	75.758	ENSGACG00000012474	rabl2	99	72.273	Gasterosteus_aculeatus
ENSG00000079974	RABL2B	100	80.808	ENSHBUG00000010964	rabl2	92	77.073	Haplochromis_burtoni
ENSG00000079974	RABL2B	100	92.929	ENSHGLG00000005750	-	99	88.688	Heterocephalus_glaber_female
ENSG00000079974	RABL2B	100	92.929	ENSHGLG00100016281	-	99	88.688	Heterocephalus_glaber_male
ENSG00000079974	RABL2B	100	92.929	ENSSTOG00000002723	-	99	91.855	Ictidomys_tridecemlineatus
ENSG00000079974	RABL2B	100	92.929	ENSJJAG00000010792	Rabl2	99	88.235	Jaculus_jaculus
ENSG00000079974	RABL2B	100	80.808	ENSKMAG00000012723	rabl2	99	73.636	Kryptolebias_marmoratus
ENSG00000079974	RABL2B	100	79.798	ENSLBEG00000003644	rabl2	99	73.182	Labrus_bergylta
ENSG00000079974	RABL2B	100	80.808	ENSLACG00000003722	rabl2	96	78.241	Latimeria_chalumnae
ENSG00000079974	RABL2B	100	80.808	ENSLOCG00000016767	rabl2	96	77.419	Lepisosteus_oculatus
ENSG00000079974	RABL2B	100	96.970	ENSMFAG00000044775	-	100	96.070	Macaca_fascicularis
ENSG00000079974	RABL2B	100	96.970	ENSMMUG00000022914	RABL2B	100	96.070	Macaca_mulatta
ENSG00000079974	RABL2B	100	96.970	ENSMNEG00000028460	-	100	95.614	Macaca_nemestrina
ENSG00000079974	RABL2B	100	95.175	ENSMLEG00000032621	-	100	95.175	Mandrillus_leucophaeus
ENSG00000079974	RABL2B	100	79.798	ENSMAMG00000008168	rabl2	99	72.727	Mastacembelus_armatus
ENSG00000079974	RABL2B	100	80.808	ENSMZEG00005019758	rabl2	96	75.481	Maylandia_zebra
ENSG00000079974	RABL2B	100	91.919	ENSMAUG00000010955	Rabl2	99	87.330	Mesocricetus_auratus
ENSG00000079974	RABL2B	100	93.939	ENSMICG00000031301	-	100	92.576	Microcebus_murinus
ENSG00000079974	RABL2B	100	91.919	ENSMOCG00000002775	Rabl2	99	86.364	Microtus_ochrogaster
ENSG00000079974	RABL2B	91	93.333	ENSMODG00000010838	-	97	85.915	Monodelphis_domestica
ENSG00000079974	RABL2B	100	78.788	ENSMALG00000005944	rabl2	99	72.727	Monopterus_albus
ENSG00000079974	RABL2B	100	89.899	MGP_CAROLIEiJ_G0020176	Rabl2	98	84.163	Mus_caroli
ENSG00000079974	RABL2B	100	87.879	ENSMUSG00000022621	Rabl2	99	83.710	Mus_musculus
ENSG00000079974	RABL2B	100	88.889	MGP_PahariEiJ_G0020181	Rabl2	99	84.163	Mus_pahari
ENSG00000079974	RABL2B	100	87.879	MGP_SPRETEiJ_G0021073	Rabl2	99	83.258	Mus_spretus
ENSG00000079974	RABL2B	100	91.919	ENSMPUG00000001806	-	99	89.140	Mustela_putorius_furo
ENSG00000079974	RABL2B	100	91.919	ENSNGAG00000012843	Rabl2	95	86.758	Nannospalax_galili
ENSG00000079974	RABL2B	100	80.808	ENSNBRG00000000489	rabl2	92	77.073	Neolamprologus_brichardi
ENSG00000079974	RABL2B	100	96.070	ENSNLEG00000030435	-	100	96.070	Nomascus_leucogenys
ENSG00000079974	RABL2B	100	91.919	ENSODEG00000015650	-	98	89.450	Octodon_degus
ENSG00000079974	RABL2B	100	81.818	ENSONIG00000014885	rabl2	100	70.996	Oreochromis_niloticus
ENSG00000079974	RABL2B	100	74.747	ENSORLG00000009874	rabl2	92	73.430	Oryzias_latipes
ENSG00000079974	RABL2B	100	74.747	ENSORLG00020001721	rabl2	92	73.430	Oryzias_latipes_hni
ENSG00000079974	RABL2B	100	74.747	ENSORLG00015014268	rabl2	92	73.430	Oryzias_latipes_hsok
ENSG00000079974	RABL2B	100	76.768	ENSOMEG00000008576	rabl2	95	74.396	Oryzias_melastigma
ENSG00000079974	RABL2B	100	93.939	ENSOGAG00000009123	-	100	91.266	Otolemur_garnettii
ENSG00000079974	RABL2B	100	92.929	ENSPPRG00000014642	-	100	86.087	Panthera_pardus
ENSG00000079974	RABL2B	100	92.929	ENSPTIG00000018747	-	99	89.593	Panthera_tigris_altaica
ENSG00000079974	RABL2B	100	100.000	ENSPTRG00000014555	-	100	97.479	Pan_troglodytes
ENSG00000079974	RABL2B	100	95.960	ENSPANG00000036121	-	100	94.958	Papio_anubis
ENSG00000079974	RABL2B	91	83.333	ENSPKIG00000025372	rabl2	88	81.122	Paramormyrops_kingsleyae
ENSG00000079974	RABL2B	91	90.000	ENSPSIG00000014041	-	93	82.464	Pelodiscus_sinensis
ENSG00000079974	RABL2B	100	73.737	ENSPMGG00000012946	rabl2	96	75.127	Periophthalmus_magnuspinnatus
ENSG00000079974	RABL2B	100	91.919	ENSPEMG00000024045	Rabl2	99	85.973	Peromyscus_maniculatus_bairdii
ENSG00000079974	RABL2B	94	92.063	ENSPCIG00000012436	-	89	83.636	Phascolarctos_cinereus
ENSG00000079974	RABL2B	91	85.556	ENSPFOG00000017960	rabl2	95	74.882	Poecilia_formosa
ENSG00000079974	RABL2B	91	85.556	ENSPLAG00000015685	rabl2	95	75.598	Poecilia_latipinna
ENSG00000079974	RABL2B	91	85.556	ENSPMEG00000004703	rabl2	95	75.598	Poecilia_mexicana
ENSG00000079974	RABL2B	92	83.516	ENSPREG00000014761	rabl2	94	78.307	Poecilia_reticulata
ENSG00000079974	RABL2B	100	96.970	ENSPPYG00000012000	-	100	96.070	Pongo_abelii
ENSG00000079974	RABL2B	100	93.013	ENSPCOG00000024865	-	100	93.013	Propithecus_coquereli
ENSG00000079974	RABL2B	100	93.939	ENSPVAG00000004539	-	100	86.920	Pteropus_vampyrus
ENSG00000079974	RABL2B	100	80.808	ENSPNYG00000004845	rabl2	92	77.073	Pundamilia_nyererei
ENSG00000079974	RABL2B	100	82.828	ENSPNAG00000024254	rabl2	100	76.339	Pygocentrus_nattereri
ENSG00000079974	RABL2B	100	90.909	ENSRNOG00000013947	Rabl2	88	85.520	Rattus_norvegicus
ENSG00000079974	RABL2B	100	94.949	ENSRBIG00000033607	-	100	93.886	Rhinopithecus_bieti
ENSG00000079974	RABL2B	100	95.960	ENSRROG00000031130	-	100	95.633	Rhinopithecus_roxellana
ENSG00000079974	RABL2B	100	96.970	ENSSBOG00000033266	-	100	96.070	Saimiri_boliviensis_boliviensis
ENSG00000079974	RABL2B	100	77.778	ENSSFOG00015020738	rabl2	98	73.853	Scleropages_formosus
ENSG00000079974	RABL2B	100	82.828	ENSSMAG00000004606	rabl2	93	76.812	Scophthalmus_maximus
ENSG00000079974	RABL2B	100	81.818	ENSSDUG00000014765	rabl2	99	73.182	Seriola_dumerili
ENSG00000079974	RABL2B	100	91.919	ENSSSCG00000025041	-	100	90.588	Sus_scrofa
ENSG00000079974	RABL2B	89	76.961	ENSTGUG00000016028	-	98	76.961	Taeniopygia_guttata
ENSG00000079974	RABL2B	100	79.798	ENSTRUG00000012454	rabl2	99	72.727	Takifugu_rubripes
ENSG00000079974	RABL2B	100	78.788	ENSTNIG00000017951	rabl2	99	72.273	Tetraodon_nigroviridis
ENSG00000079974	RABL2B	100	91.919	ENSUAMG00000015761	-	98	82.895	Ursus_americanus
ENSG00000079974	RABL2B	100	91.919	ENSUMAG00000017116	-	99	89.593	Ursus_maritimus
ENSG00000079974	RABL2B	100	91.919	ENSVVUG00000025761	-	99	88.235	Vulpes_vulpes
ENSG00000079974	RABL2B	100	80.808	ENSXETG00000015712	rabl2b	100	75.325	Xenopus_tropicalis
ENSG00000079974	RABL2B	91	85.556	ENSXMAG00000004569	rabl2	95	74.882	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000242	pericentriolar material	28625565.	IDA	Component
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005515	protein binding	28428259.28625565.	IPI	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005737	cytoplasm	28625565.	IDA	Component
GO:0005814	centriole	28428259.28625565.	IDA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0032482	Rab protein signal transduction	21873635.	IBA	Process
GO:0036064	ciliary basal body	28428259.28625565.	IDA	Component
GO:0042073	intraciliary transport	28625565.	IMP	Process
GO:0060271	cilium assembly	28625565.	IMP	Process