EuRBPDB

Description

Ensembl ID: ENSG00000082068 (Gene tree)
Gene ID: 55100
Gene Symbol: WDR70
Alias: FLJ10233
Full Name: WD repeat domain 70
Gene Type: protein_coding
Species: Homo_sapiens
Status: putative
Strand: Plus strand
Length: 374,224 bases
Position: chr5:37,379,212-37,753,435
Accession: 25495
RBP type: non-canonical RBP
Summary: (WD Repeat Domain 70) is a Protein Coding gene. Gene Ontology (GO) annotations related to this gene include enzyme binding.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000265107	WDR70-201	2983	-	ENSP00000265107	654 (aa)	-	Q9NW82
ENST00000511906	WDR70-207	5716	-	-	- (aa)	-	-
ENST00000510699	WDR70-206	690	-	-	- (aa)	-	-
ENST00000508730	WDR70-205	556	-	-	- (aa)	-	-
ENST00000505799	WDR70-203	365	-	-	- (aa)	-	-
ENST00000504564	WDR70-202	1526	-	ENSP00000425841	387 (aa)	-	D6RIW8
ENST00000507136	WDR70-204	759	-	-	- (aa)	-	-

Gene Model

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000082068	Tumor Necrosis Factor-alpha	2.16188108125209E-8	17903293
ENSG00000082068	Tumor Necrosis Factor-alpha	1.38733648951707E-7	17903293
ENSG00000082068	Brain	2.4361746890577E-6	17903297
ENSG00000082068	Body Weight	9.5460000E-005	-
ENSG00000082068	Platelet Function Tests	7.9900000E-006	-

Protein-Protein Interaction (PPI)

* RBP PPI network refers to all genes directly bind to RBP

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0019899	enzyme binding	23382074.	IPI	Function
GO:0035861	site of double-strand break	21873635.	IBA	Component
GO:1903775	regulation of DNA double-strand break processing	21873635.	IBA	Process
GO:2001173	regulation of histone H2B conserved C-terminal lysine ubiquitination	21873635.	IBA	Process