EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000082515 (Gene tree)
Gene ID
29093
Gene Symbol
MRPL22
Alias
MRP-L25|RPML25|HSPC158
Full Name
mitochondrial ribosomal protein L22
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
28,342 bases
Position
chr5:154,941,070-154,969,411
Accession
14480
RBP type
canonical RBP
Summary
Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 39S subunit protein that belongs to the L22 ribosomal protein family. A pseudogene corresponding to this gene is found on chromosome 4q. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000431040Ribosomal_L22PF00237.195.2e-2511
ENSP00000429039Ribosomal_L22PF00237.195.7e-2511
ENSP00000411177Ribosomal_L22PF00237.196.8e-2511
ENSP00000265229Ribosomal_L22PF00237.191.8e-2211
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
27453046Comprehensive Identification of RNA-Binding Domains in Human CellsRIC & Hela2016 Aug 18Castello ADOI: 10.1016/j.molcel.2016.06.029
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000520040MRPL22-2052344--- (aa)--
ENST00000522038MRPL22-2063162-ENSP00000429039212 (aa)-E7ESL0
ENST00000439747MRPL22-202784-ENSP00000411177232 (aa)-J3KQY1
ENST00000518364MRPL22-203481--- (aa)--
ENST00000519059MRPL22-204511-ENSP0000043064838 (aa)-H0YBZ7
ENST00000523037MRPL22-2073176-ENSP00000431040206 (aa)-Q9NWU5
ENST00000265229MRPL22-2013035-ENSP00000265229126 (aa)-Q9NWU5
Gene Model
Click here to download ENSG00000082515's gene model file
Pathways
Pathway IDPathway NameSource
hsa03010RibosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000082515's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000082515MRPL2210074.603ENSAPOG00000017519mrpl2210066.507Acanthochromis_polyacanthus
ENSG00000082515MRPL2210091.270ENSAMEG00000016612MRPL2210088.208Ailuropoda_melanoleuca
ENSG00000082515MRPL2210076.984ENSACIG00000013362mrpl227973.913Amphilophus_citrinellus
ENSG00000082515MRPL2210073.810ENSAOCG00000012679mrpl229272.727Amphiprion_ocellaris
ENSG00000082515MRPL2210074.603ENSAPEG00000006345mrpl228871.196Amphiprion_percula
ENSG00000082515MRPL2210073.810ENSATEG00000013930mrpl2210066.981Anabas_testudineus
ENSG00000082515MRPL2210081.746ENSACAG00000003875MRPL228681.609Anolis_carolinensis
ENSG00000082515MRPL2210091.270ENSANAG00000022815-9789.706Aotus_nancymaae
ENSG00000082515MRPL2210096.226ENSANAG00000032976-10096.226Aotus_nancymaae
ENSG00000082515MRPL2210074.603ENSACLG00000024902mrpl2210066.667Astatotilapia_calliptera
ENSG00000082515MRPL2210076.190ENSAMXG00000006753mrpl229568.342Astyanax_mexicanus
ENSG00000082515MRPL2210092.063ENSBTAG00000019457MRPL2210089.806Bos_taurus
ENSG00000082515MRPL227930.588WBGene00012645mrpl-226530.588Caenorhabditis_elegans
ENSG00000082515MRPL2210095.238ENSCJAG00000007325MRPL2210094.660Callithrix_jacchus
ENSG00000082515MRPL2210092.063ENSCAFG00000017605MRPL2210093.889Canis_familiaris
ENSG00000082515MRPL2210092.063ENSCAFG00020023930MRPL229490.576Canis_lupus_dingo
ENSG00000082515MRPL2210092.063ENSCHIG00000020523MRPL2210089.151Capra_hircus
ENSG00000082515MRPL2210094.444ENSTSYG00000010589-10094.175Carlito_syrichta
ENSG00000082515MRPL229576.410ENSTSYG00000031611-10076.410Carlito_syrichta
ENSG00000082515MRPL2210088.889ENSCAPG00000008613MRPL229486.364Cavia_aperea
ENSG00000082515MRPL2210088.889ENSCPOG00000006767MRPL2210082.547Cavia_porcellus
ENSG00000082515MRPL2210096.825ENSCCAG00000000038MRPL2210096.698Cebus_capucinus
ENSG00000082515MRPL2210096.602ENSCATG00000038763MRPL2210096.602Cercocebus_atys
ENSG00000082515MRPL2210091.270ENSCLAG00000011777MRPL2210089.806Chinchilla_lanigera
ENSG00000082515MRPL2210095.238ENSCSAG00000010752MRPL2210094.175Chlorocebus_sabaeus
ENSG00000082515MRPL2210067.961ENSCHOG00000011946MRPL2210067.961Choloepus_hoffmanni
ENSG00000082515MRPL2210081.746ENSCPBG00000002068MRPL229471.226Chrysemys_picta_bellii
ENSG00000082515MRPL2210037.302ENSCING00000023561-7938.272Ciona_intestinalis
ENSG00000082515MRPL2210094.828ENSCANG00000039732MRPL2210094.828Colobus_angolensis_palliatus
ENSG00000082515MRPL2210092.063ENSCGRG00001019966Mrpl2210087.379Cricetulus_griseus_chok1gshd
ENSG00000082515MRPL2210091.270ENSCGRG00000005024Mrpl2210086.408Cricetulus_griseus_crigri
ENSG00000082515MRPL2210074.603ENSCSEG00000020463mrpl227868.478Cynoglossus_semilaevis
ENSG00000082515MRPL2210075.397ENSCVAG00000021059mrpl2210069.898Cyprinodon_variegatus
ENSG00000082515MRPL2210077.778ENSDARG00000109961mrpl2210066.667Danio_rerio
ENSG00000082515MRPL2210092.857ENSDNOG00000012823MRPL2210089.151Dasypus_novemcinctus
ENSG00000082515MRPL2210072.222ENSDORG00000010733Mrpl229878.531Dipodomys_ordii
ENSG00000082515MRPL2210051.562FBgn0030786mRpL228048.128Drosophila_melanogaster
ENSG00000082515MRPL229588.718ENSETEG00000008723MRPL228788.718Echinops_telfairi
ENSG00000082515MRPL2210074.603ENSEBUG00000015942mrpl228972.626Eptatretus_burgeri
ENSG00000082515MRPL2210091.270ENSEASG00005001016MRPL2210089.623Equus_asinus_asinus
ENSG00000082515MRPL2210090.476ENSECAG00000018172MRPL2210089.151Equus_caballus
ENSG00000082515MRPL229192.174ENSEEUG00000009272MRPL228592.308Erinaceus_europaeus
ENSG00000082515MRPL2210072.222ENSELUG00000001259mrpl229965.482Esox_lucius
ENSG00000082515MRPL2210091.270ENSFCAG00000036527MRPL2210089.151Felis_catus
ENSG00000082515MRPL2210077.778ENSFALG00000008367MRPL2210071.963Ficedula_albicollis
ENSG00000082515MRPL2210092.063ENSFDAG00000007547MRPL2210089.623Fukomys_damarensis
ENSG00000082515MRPL2210075.397ENSFHEG00000016348mrpl2210067.773Fundulus_heteroclitus
ENSG00000082515MRPL2210076.190ENSGMOG00000013690mrpl229474.138Gadus_morhua
ENSG00000082515MRPL2210080.159ENSGALG00000003919MRPL229973.786Gallus_gallus
ENSG00000082515MRPL2210073.810ENSGAFG00000011440mrpl2210064.929Gambusia_affinis
ENSG00000082515MRPL2210071.429ENSGACG00000020826mrpl229662.927Gasterosteus_aculeatus
ENSG00000082515MRPL229654.229ENSGAGG00000025083MRPL2210054.286Gopherus_agassizii
ENSG00000082515MRPL22100100.000ENSGGOG00000042383MRPL2210099.515Gorilla_gorilla
ENSG00000082515MRPL2210074.603ENSHBUG00000000840mrpl2210067.143Haplochromis_burtoni
ENSG00000082515MRPL2210092.063ENSHGLG00000018496MRPL2210091.262Heterocephalus_glaber_female
ENSG00000082515MRPL2210092.063ENSHGLG00100014119MRPL2210091.038Heterocephalus_glaber_male
ENSG00000082515MRPL2210072.222ENSHCOG00000019038mrpl2210064.486Hippocampus_comes
ENSG00000082515MRPL2210075.397ENSIPUG00000006432mrpl229966.507Ictalurus_punctatus
ENSG00000082515MRPL2210093.651ENSSTOG00000005822MRPL2210091.509Ictidomys_tridecemlineatus
ENSG00000082515MRPL2210092.063ENSJJAG00000019238Mrpl2210088.889Jaculus_jaculus
ENSG00000082515MRPL2210074.603ENSKMAG00000003611mrpl229966.507Kryptolebias_marmoratus
ENSG00000082515MRPL2210073.810ENSLBEG00000009644mrpl2210067.143Labrus_bergylta
ENSG00000082515MRPL2210079.365ENSLACG00000003356MRPL229476.064Latimeria_chalumnae
ENSG00000082515MRPL229076.106ENSLOCG00000012398mrpl229465.327Lepisosteus_oculatus
ENSG00000082515MRPL2210092.857ENSLAFG00000009866MRPL2210092.778Loxodonta_africana
ENSG00000082515MRPL2210096.602ENSMFAG00000001423MRPL2210096.602Macaca_fascicularis
ENSG00000082515MRPL2210095.146ENSMMUG00000021229MRPL2210095.146Macaca_mulatta
ENSG00000082515MRPL2210096.983ENSMNEG00000029769MRPL2210096.983Macaca_nemestrina
ENSG00000082515MRPL2210096.552ENSMLEG00000041525MRPL2210096.552Mandrillus_leucophaeus
ENSG00000082515MRPL2210076.190ENSMAMG00000021842mrpl229870.256Mastacembelus_armatus
ENSG00000082515MRPL2210074.603ENSMZEG00005011987mrpl2210067.143Maylandia_zebra
ENSG00000082515MRPL2210080.159ENSMGAG00000005605MRPL2210072.986Meleagris_gallopavo
ENSG00000082515MRPL226686.765ENSMAUG00000021980Mrpl2210086.765Mesocricetus_auratus
ENSG00000082515MRPL2210090.094ENSMICG00000029267MRPL2210090.094Microcebus_murinus
ENSG00000082515MRPL2210093.651ENSMOCG00000021016Mrpl2210088.835Microtus_ochrogaster
ENSG00000082515MRPL2210074.603ENSMMOG00000013411mrpl229966.995Mola_mola
ENSG00000082515MRPL2210087.302ENSMODG00000008561MRPL2210084.434Monodelphis_domestica
ENSG00000082515MRPL2210075.397ENSMALG00000019455mrpl2210069.014Monopterus_albus
ENSG00000082515MRPL2210094.444MGP_CAROLIEiJ_G0016386Mrpl2210089.320Mus_caroli
ENSG00000082515MRPL2210094.444ENSMUSG00000020514Mrpl2210089.320Mus_musculus
ENSG00000082515MRPL229494.958MGP_PahariEiJ_G0017521Mrpl2210078.641Mus_pahari
ENSG00000082515MRPL2210092.857MGP_SPRETEiJ_G0017228Mrpl2210088.350Mus_spretus
ENSG00000082515MRPL2210092.063ENSMPUG00000013533MRPL2210089.151Mustela_putorius_furo
ENSG00000082515MRPL2210092.857ENSMLUG00000016853MRPL229787.065Myotis_lucifugus
ENSG00000082515MRPL2210092.063ENSNGAG00000000923Mrpl229986.316Nannospalax_galili
ENSG00000082515MRPL2210073.810ENSNBRG00000015114mrpl228373.295Neolamprologus_brichardi
ENSG00000082515MRPL22100100.000ENSNLEG00000029916MRPL22100100.000Nomascus_leucogenys
ENSG00000082515MRPL229473.950ENSMEUG00000005738MRPL2210068.889Notamacropus_eugenii
ENSG00000082515MRPL2210089.683ENSOPRG00000013118MRPL2210086.341Ochotona_princeps
ENSG00000082515MRPL2210074.603ENSONIG00000016439mrpl2210067.299Oreochromis_niloticus
ENSG00000082515MRPL2210083.333ENSOANG00000005091MRPL2210078.571Ornithorhynchus_anatinus
ENSG00000082515MRPL2210092.063ENSOCUG00000011189MRPL229191.748Oryctolagus_cuniculus
ENSG00000082515MRPL2210073.016ENSORLG00000022618mrpl2210065.072Oryzias_latipes
ENSG00000082515MRPL2210073.016ENSORLG00020007188mrpl227870.109Oryzias_latipes_hni
ENSG00000082515MRPL2210073.016ENSORLG00015000806mrpl228870.109Oryzias_latipes_hsok
ENSG00000082515MRPL2210073.810ENSOMEG00000023099mrpl2210064.623Oryzias_melastigma
ENSG00000082515MRPL229469.748ENSOMEG00000023447-7768.067Oryzias_melastigma
ENSG00000082515MRPL2210091.270ENSOGAG00000016777MRPL229588.660Otolemur_garnettii
ENSG00000082515MRPL2210091.270ENSOARG00000010435MRPL229391.398Ovis_aries
ENSG00000082515MRPL22100100.000ENSPPAG00000027082MRPL2210099.515Pan_paniscus
ENSG00000082515MRPL2210092.063ENSPPRG00000004926MRPL2210089.151Panthera_pardus
ENSG00000082515MRPL2210092.063ENSPTIG00000014937MRPL2210089.623Panthera_tigris_altaica
ENSG00000082515MRPL22100100.000ENSPTRG00000051589MRPL2210099.515Pan_troglodytes
ENSG00000082515MRPL2210095.690ENSPANG00000007037MRPL2210095.690Papio_anubis
ENSG00000082515MRPL2210077.778ENSPKIG00000009864mrpl228973.656Paramormyrops_kingsleyae
ENSG00000082515MRPL2210083.333ENSPSIG00000003917MRPL229979.570Pelodiscus_sinensis
ENSG00000082515MRPL2210071.429ENSPMGG00000024128mrpl228270.000Periophthalmus_magnuspinnatus
ENSG00000082515MRPL2210092.857ENSPEMG00000021188Mrpl2210090.686Peromyscus_maniculatus_bairdii
ENSG00000082515MRPL2210062.238ENSPMAG00000004569-8762.051Petromyzon_marinus
ENSG00000082515MRPL2210088.889ENSPCIG00000019225MRPL2210084.906Phascolarctos_cinereus
ENSG00000082515MRPL2210075.397ENSPFOG00000011072mrpl229966.995Poecilia_formosa
ENSG00000082515MRPL2210075.397ENSPLAG00000019524mrpl229373.295Poecilia_latipinna
ENSG00000082515MRPL2210075.397ENSPLAG00000018181MRPL229373.295Poecilia_latipinna
ENSG00000082515MRPL2210074.603ENSPMEG00000003477mrpl2210066.351Poecilia_mexicana
ENSG00000082515MRPL2210074.603ENSPREG00000013247mrpl2210064.929Poecilia_reticulata
ENSG00000082515MRPL2210097.642ENSPPYG00000015979MRPL2210097.642Pongo_abelii
ENSG00000082515MRPL226687.500ENSPCAG00000008714MRPL2210087.500Procavia_capensis
ENSG00000082515MRPL2210091.262ENSPCOG00000014557-9491.262Propithecus_coquereli
ENSG00000082515MRPL2210091.509ENSPCOG00000017467-10091.509Propithecus_coquereli
ENSG00000082515MRPL2210092.063ENSPVAG00000002266MRPL2210090.777Pteropus_vampyrus
ENSG00000082515MRPL229473.950ENSPNYG00000013370mrpl227570.968Pundamilia_nyererei
ENSG00000082515MRPL2210075.397ENSPNAG00000016347mrpl229566.000Pygocentrus_nattereri
ENSG00000082515MRPL2210094.444ENSRNOG00000027039Mrpl229289.320Rattus_norvegicus
ENSG00000082515MRPL2210096.032ENSRBIG00000028736MRPL2210095.631Rhinopithecus_bieti
ENSG00000082515MRPL2210096.032ENSRROG00000018436MRPL2210095.631Rhinopithecus_roxellana
ENSG00000082515MRPL2210096.032ENSSBOG00000025661MRPL2210095.146Saimiri_boliviensis_boliviensis
ENSG00000082515MRPL2210074.803ENSSHAG00000012127MRPL2210074.648Sarcophilus_harrisii
ENSG00000082515MRPL2210076.984ENSSFOG00015010743mrpl228375.706Scleropages_formosus
ENSG00000082515MRPL2210061.074ENSSMAG00000010168mrpl2210060.173Scophthalmus_maximus
ENSG00000082515MRPL2210076.190ENSSDUG00000004500mrpl2210069.340Seriola_dumerili
ENSG00000082515MRPL2210076.190ENSSLDG00000010893mrpl2210068.246Seriola_lalandi_dorsalis
ENSG00000082515MRPL2210080.952ENSSPUG00000011965MRPL2210070.423Sphenodon_punctatus
ENSG00000082515MRPL2210073.810ENSSPAG00000007693mrpl229070.652Stegastes_partitus
ENSG00000082515MRPL2210090.476ENSSSCG00000017065MRPL2210088.208Sus_scrofa
ENSG00000082515MRPL2210077.778ENSTGUG00000000684MRPL229978.919Taeniopygia_guttata
ENSG00000082515MRPL2210075.397ENSTRUG00000019671mrpl2210066.190Takifugu_rubripes
ENSG00000082515MRPL2210076.190ENSTNIG00000007624mrpl229371.053Tetraodon_nigroviridis
ENSG00000082515MRPL229478.866ENSTBEG00000006861MRPL228678.866Tupaia_belangeri
ENSG00000082515MRPL2210077.778ENSTTRG00000015959MRPL2210064.078Tursiops_truncatus
ENSG00000082515MRPL2210090.476ENSUAMG00000019225MRPL2210091.489Ursus_americanus
ENSG00000082515MRPL2210090.476ENSUMAG00000002718MRPL229586.792Ursus_maritimus
ENSG00000082515MRPL2210091.270ENSVPAG00000001170MRPL2210088.835Vicugna_pacos
ENSG00000082515MRPL2210092.063ENSVVUG00000004611MRPL2210088.679Vulpes_vulpes
ENSG00000082515MRPL2210080.159ENSXETG00000019403mrpl229974.129Xenopus_tropicalis
ENSG00000082515MRPL2210073.810ENSXCOG00000018806mrpl228272.727Xiphophorus_couchianus
ENSG00000082515MRPL2210073.810ENSXMAG00000015564mrpl229966.667Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22681889.HDAFunction
GO:0003735structural constituent of ribosome21873635.IBAFunction
GO:0005739mitochondrion28892042.IDAComponent
GO:0005739mitochondrion-ISSComponent
GO:0005743mitochondrial inner membrane-TASComponent
GO:0005762mitochondrial large ribosomal subunit21873635.IBAComponent
GO:0005762mitochondrial large ribosomal subunit25278503.28892042.IDAComponent
GO:0015934large ribosomal subunit21873635.IBAComponent
GO:0042255ribosome assembly21873635.IBAProcess
GO:0070125mitochondrial translational elongation-TASProcess
GO:0070126mitochondrial translational termination-TASProcess

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