EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000083223 (Gene tree)
Gene ID
79670
Gene Symbol
TUT7
Alias
KIAA1711|FLJ13409|PAPD6|TENT3B|ZCCHC6
Full Name
terminal uridylyl transferase 7
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
66,769 bases
Position
chr9:86,287,733-86,354,501
Accession
25817
RBP type
canonical RBP
Summary
(Terminal Uridylyl Transferase 7) is a Protein Coding gene. An important paralog of this gene is TUT4.
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000277141zf-CCHCPF00098.233.8e-1413
ENSP00000277141zf-CCHCPF00098.233.8e-1423
ENSP00000277141zf-CCHCPF00098.233.8e-1433
ENSP00000365130zf-CCHCPF00098.233.3e-1313
ENSP00000365130zf-CCHCPF00098.233.3e-1323
ENSP00000365130zf-CCHCPF00098.233.3e-1333
ENSP00000365124zf-CCHCPF00098.234.3e-1012
ENSP00000365124zf-CCHCPF00098.234.3e-1022
ENSP00000365127zf-CCHCPF00098.234.3e-0912
ENSP00000365127zf-CCHCPF00098.234.3e-0922
ENSP00000365127PAP_assocPF03828.196.8e-2712
ENSP00000365127PAP_assocPF03828.196.8e-2722
ENSP00000365130PAP_assocPF03828.199.6e-2712
ENSP00000365130PAP_assocPF03828.199.6e-2722
ENSP00000365124PAP_assocPF03828.197.2e-1511
ENSP00000277141PAP_assocPF03828.191.7e-1411
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
28671666Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis.Nat Struct Mol Biol2017 AugFaehnle CRdoi: 10.1038/nsmb.3428
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000469004TUT7-207625--- (aa)--
ENST00000277141TUT7-2015724XM_024447671ENSP00000277141784 (aa)XP_024303439X6R3Q3
ENST00000375947TUT7-202611-ENSP00000365114168 (aa)-Q5VYS9
ENST00000375957TUT7-2042262-ENSP00000365124395 (aa)-A0A0C4DFW3
ENST00000375948TUT7-203958-ENSP00000365115124 (aa)-Q5VYT0
ENST00000375960TUT7-2054939-ENSP000003651271259 (aa)-Q5VYS8
ENST00000375963TUT7-2065379XM_005252207ENSP000003651301495 (aa)XP_005252264Q5VYS8
Gene Model
Click here to download ENSG00000083223's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000083223Body Weight1.12917880014149E-817903300
ENSG00000083223Cholesterol, HDL1.29340570804229E-617903299
ENSG00000083223Osteoporosis1.4183572339066E-517903296
ENSG00000083223Asthma5E-625918132
ENSG00000083223Toluene 2,4-Diisocyanate5E-625918132
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000083223rs17461620986348093ADiisocyanate-induced asthma25918132[1.61-3.41]2.34EFO_0006995|EFO_0000270
ENSG00000083223rs7037424986306375?Body mass index30595370EFO_0004340
ENSG00000083223rs700768986322702?Lung function (FEV1/FVC)30595370EFO_0004713
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000083223's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000083223TUT710064.516ENSG00000134744TUT46468.733
ENSG00000083223TUT77930.612ENSG00000164329TENT27431.818
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000083223TUT79554.722ENSAPOG00000012979TUT79659.725Acanthochromis_polyacanthus
ENSG00000083223TUT710096.774ENSAMEG00000004148TUT79196.471Ailuropoda_melanoleuca
ENSG00000083223TUT710066.129ENSAOCG00000004223-9165.405Amphiprion_ocellaris
ENSG00000083223TUT79357.065ENSAPEG00000014922-9056.825Amphiprion_percula
ENSG00000083223TUT710083.294ENSAPLG00000015510TUT79283.294Anas_platyrhynchos
ENSG00000083223TUT710087.903ENSACAG00000000279TUT79769.482Anolis_carolinensis
ENSG00000083223TUT710098.987ENSANAG00000025848TUT710098.987Aotus_nancymaae
ENSG00000083223TUT79953.580ENSACLG00000018198TUT77672.973Astatotilapia_calliptera
ENSG00000083223TUT710096.919ENSBTAG00000001737TUT79196.919Bos_taurus
ENSG00000083223TUT710098.987ENSCJAG00000001845TUT710098.987Callithrix_jacchus
ENSG00000083223TUT710096.235ENSCAFG00000001331TUT79196.235Canis_familiaris
ENSG00000083223TUT710096.235ENSCAFG00020023620TUT710092.152Canis_lupus_dingo
ENSG00000083223TUT710096.774ENSCHIG00000017690TUT79196.000Capra_hircus
ENSG00000083223TUT710097.581ENSTSYG00000008907TUT710096.203Carlito_syrichta
ENSG00000083223TUT710093.548ENSCPOG00000002500TUT78690.977Cavia_porcellus
ENSG00000083223TUT710099.241ENSCATG00000032888TUT710099.241Cercocebus_atys
ENSG00000083223TUT710094.355ENSCLAG00000007535TUT79191.765Chinchilla_lanigera
ENSG00000083223TUT710098.588ENSCSAG00000007408TUT710096.190Chlorocebus_sabaeus
ENSG00000083223TUT79893.333ENSCHOG00000011129TUT710081.933Choloepus_hoffmanni
ENSG00000083223TUT710087.903ENSCPBG00000005272TUT78684.925Chrysemys_picta_bellii
ENSG00000083223TUT710098.987ENSCANG00000035790TUT710098.987Colobus_angolensis_palliatus
ENSG00000083223TUT79892.840ENSCGRG00001020605-9193.233Cricetulus_griseus_chok1gshd
ENSG00000083223TUT710094.355ENSCGRG00000016585-10077.346Cricetulus_griseus_crigri
ENSG00000083223TUT79554.327ENSCSEG00000007068TUT78468.085Cynoglossus_semilaevis
ENSG00000083223TUT79551.932ENSCVAG00000012526-7061.394Cyprinodon_variegatus
ENSG00000083223TUT79765.833ENSDARG00000074645CABZ01032476.18064.516Danio_rerio
ENSG00000083223TUT710098.387ENSDNOG00000010663TUT79490.454Dasypus_novemcinctus
ENSG00000083223TUT79696.316ENSDORG00000009046-9796.316Dipodomys_ordii
ENSG00000083223TUT710095.161ENSETEG00000007739TUT78885.360Echinops_telfairi
ENSG00000083223TUT710095.765ENSEASG00005020165TUT710088.282Equus_asinus_asinus
ENSG00000083223TUT710095.765ENSECAG00000014831TUT79987.949Equus_caballus
ENSG00000083223TUT710095.968ENSEEUG00000012794TUT79972.524Erinaceus_europaeus
ENSG00000083223TUT79961.481ENSELUG00000013049-9669.027Esox_lucius
ENSG00000083223TUT710095.949ENSFCAG00000003491TUT710095.949Felis_catus
ENSG00000083223TUT710085.484ENSFALG00000003541TUT79182.701Ficedula_albicollis
ENSG00000083223TUT710094.355ENSFDAG00000002315TUT78692.462Fukomys_damarensis
ENSG00000083223TUT710051.270ENSFHEG00000004770-8356.044Fundulus_heteroclitus
ENSG00000083223TUT79863.636ENSGMOG00000001464-8074.005Gadus_morhua
ENSG00000083223TUT710082.258ENSGALG00000012607ZCCHC68882.957Gallus_gallus
ENSG00000083223TUT78459.091ENSGAFG00000017138-9259.502Gambusia_affinis
ENSG00000083223TUT710063.710ENSGAFG00000017141-8063.107Gambusia_affinis
ENSG00000083223TUT79770.833ENSGACG00000004735TUT78866.934Gasterosteus_aculeatus
ENSG00000083223TUT79979.075ENSGAGG00000013087TUT79179.699Gopherus_agassizii
ENSG00000083223TUT710099.747ENSGGOG00000007523ZCCHC610099.747Gorilla_gorilla
ENSG00000083223TUT79256.131ENSHBUG00000011514-9458.120Haplochromis_burtoni
ENSG00000083223TUT710094.355ENSHGLG00000018427TUT78991.980Heterocephalus_glaber_female
ENSG00000083223TUT710094.355ENSHGLG00100004701TUT78991.729Heterocephalus_glaber_male
ENSG00000083223TUT79061.864ENSHCOG00000006100-9360.057Hippocampus_comes
ENSG00000083223TUT710097.581ENSSTOG00000000586TUT79987.432Ictidomys_tridecemlineatus
ENSG00000083223TUT79794.286ENSJJAG00000000106-9994.286Jaculus_jaculus
ENSG00000083223TUT79560.428ENSKMAG00000005782-9960.428Kryptolebias_marmoratus
ENSG00000083223TUT79765.000ENSLBEG00000015545-8264.384Labrus_bergylta
ENSG00000083223TUT710077.953ENSLACG00000001637TUT78675.990Latimeria_chalumnae
ENSG00000083223TUT710073.228ENSLOCG00000002472TUT79068.579Lepisosteus_oculatus
ENSG00000083223TUT710098.387ENSLAFG00000007884TUT710080.856Loxodonta_africana
ENSG00000083223TUT710098.987ENSMFAG00000000971TUT710098.987Macaca_fascicularis
ENSG00000083223TUT710099.241ENSMMUG00000003401TUT710099.241Macaca_mulatta
ENSG00000083223TUT710099.241ENSMNEG00000031427TUT710099.241Macaca_nemestrina
ENSG00000083223TUT710099.241ENSMLEG00000027049TUT710099.241Mandrillus_leucophaeus
ENSG00000083223TUT77271.777ENSMAMG00000011815TUT79360.452Mastacembelus_armatus
ENSG00000083223TUT79753.555ENSMZEG00005012809TUT77472.973Maylandia_zebra
ENSG00000083223TUT710081.452ENSMGAG00000006542TUT79268.119Meleagris_gallopavo
ENSG00000083223TUT710094.353ENSMAUG00000006963-9294.353Mesocricetus_auratus
ENSG00000083223TUT710096.774ENSMICG00000016944TUT710096.712Microcebus_murinus
ENSG00000083223TUT710092.405ENSMOCG00000007812-10092.405Microtus_ochrogaster
ENSG00000083223TUT710089.516ENSMODG00000003542TUT78983.208Monodelphis_domestica
ENSG00000083223TUT79059.605ENSMALG00000000634TUT78760.000Monopterus_albus
ENSG00000083223TUT710095.968MGP_CAROLIEiJ_G0018612-10079.444Mus_caroli
ENSG00000083223TUT710095.968ENSMUSG00000035248Tut79192.231Mus_musculus
ENSG00000083223TUT710095.161MGP_PahariEiJ_G0019676-9191.729Mus_pahari
ENSG00000083223TUT710095.968MGP_SPRETEiJ_G0019491-9192.231Mus_spretus
ENSG00000083223TUT710096.774ENSMPUG00000002191TUT79192.287Mustela_putorius_furo
ENSG00000083223TUT710093.548ENSMLUG00000001298TUT710083.965Myotis_lucifugus
ENSG00000083223TUT79993.077ENSNGAG00000022758-9993.077Nannospalax_galili
ENSG00000083223TUT79752.267ENSNBRG00000021961TUT77472.973Neolamprologus_brichardi
ENSG00000083223TUT710099.449ENSNLEG00000005138TUT710099.449Nomascus_leucogenys
ENSG00000083223TUT79874.545ENSMEUG00000006540TUT78371.523Notamacropus_eugenii
ENSG00000083223TUT79894.545ENSOPRG00000002893TUT79379.683Ochotona_princeps
ENSG00000083223TUT79991.071ENSODEG00000006904-9991.071Octodon_degus
ENSG00000083223TUT710065.323ENSONIG00000017001TUT78371.116Oreochromis_niloticus
ENSG00000083223TUT710096.774ENSOCUG00000010949TUT78894.353Oryctolagus_cuniculus
ENSG00000083223TUT79544.103ENSORLG00000001714-9449.563Oryzias_latipes
ENSG00000083223TUT79545.564ENSORLG00020007882-8051.696Oryzias_latipes_hni
ENSG00000083223TUT79544.845ENSORLG00015017233-7948.293Oryzias_latipes_hsok
ENSG00000083223TUT79059.104ENSOMEG00000015528-8160.172Oryzias_melastigma
ENSG00000083223TUT710099.194ENSOGAG00000015630TUT710089.766Otolemur_garnettii
ENSG00000083223TUT710095.968ENSOARG00000008732TUT79289.807Ovis_aries
ENSG00000083223TUT710099.747ENSPPAG00000038548TUT710099.747Pan_paniscus
ENSG00000083223TUT710095.696ENSPPRG00000011084TUT710095.696Panthera_pardus
ENSG00000083223TUT710095.696ENSPTIG00000007881TUT710095.696Panthera_tigris_altaica
ENSG00000083223TUT710099.747ENSPTRG00000021076TUT710099.747Pan_troglodytes
ENSG00000083223TUT710099.241ENSPANG00000024890TUT710099.241Papio_anubis
ENSG00000083223TUT710073.387ENSPKIG00000022326TUT77768.821Paramormyrops_kingsleyae
ENSG00000083223TUT710087.097ENSPSIG00000003600TUT78684.211Pelodiscus_sinensis
ENSG00000083223TUT79757.474ENSPMGG00000012649-9059.104Periophthalmus_magnuspinnatus
ENSG00000083223TUT710094.118ENSPEMG00000014030-9194.118Peromyscus_maniculatus_bairdii
ENSG00000083223TUT710087.903ENSPCIG00000018302TUT79185.681Phascolarctos_cinereus
ENSG00000083223TUT710066.400ENSPFOG00000011606-8175.297Poecilia_formosa
ENSG00000083223TUT78961.714ENSPLAG00000006121TUT79362.757Poecilia_latipinna
ENSG00000083223TUT78961.714ENSPMEG00000015937-9362.757Poecilia_mexicana
ENSG00000083223TUT79653.664ENSPREG00000009118TUT78874.359Poecilia_reticulata
ENSG00000083223TUT710099.194ENSPPYG00000019340TUT710098.595Pongo_abelii
ENSG00000083223TUT79886.667ENSPCAG00000011630TUT76688.866Procavia_capensis
ENSG00000083223TUT710096.962ENSPCOG00000023407TUT710096.962Propithecus_coquereli
ENSG00000083223TUT79894.545ENSPVAG00000004589TUT710082.085Pteropus_vampyrus
ENSG00000083223TUT79753.066ENSPNYG00000004149TUT77472.973Pundamilia_nyererei
ENSG00000083223TUT710094.355ENSRNOG00000016629Tut79191.228Rattus_norvegicus
ENSG00000083223TUT710099.241ENSRBIG00000016827TUT710099.241Rhinopithecus_bieti
ENSG00000083223TUT710099.241ENSRROG00000034432TUT710099.241Rhinopithecus_roxellana
ENSG00000083223TUT710087.903ENSSHAG00000008290TUT78985.000Sarcophilus_harrisii
ENSG00000083223TUT710070.161ENSSFOG00015009813zcchc67769.905Scleropages_formosus
ENSG00000083223TUT78762.536ENSSMAG00000010045-9063.343Scophthalmus_maximus
ENSG00000083223TUT79261.538ENSSDUG00000012876TUT79362.535Seriola_dumerili
ENSG00000083223TUT79260.497ENSSLDG00000019107-8660.623Seriola_lalandi_dorsalis
ENSG00000083223TUT710095.968ENSSARG00000009763TUT79176.440Sorex_araneus
ENSG00000083223TUT710087.097ENSSPUG00000004029TUT78984.962Sphenodon_punctatus
ENSG00000083223TUT79359.401ENSSPAG00000018387-8860.056Stegastes_partitus
ENSG00000083223TUT710096.774ENSSSCG00000010952TUT710087.542Sus_scrofa
ENSG00000083223TUT710084.677ENSTGUG00000000624TUT79181.840Taeniopygia_guttata
ENSG00000083223TUT79359.673ENSTRUG00000023807-9061.003Takifugu_rubripes
ENSG00000083223TUT79767.500ENSTNIG00000015951TUT79064.612Tetraodon_nigroviridis
ENSG00000083223TUT710095.968ENSTBEG00000010446TUT79979.064Tupaia_belangeri
ENSG00000083223TUT710088.915ENSTTRG00000004236TUT79590.691Tursiops_truncatus
ENSG00000083223TUT710096.962ENSUAMG00000027094-10096.962Ursus_americanus
ENSG00000083223TUT710097.581ENSUMAG00000004929TUT78996.742Ursus_maritimus
ENSG00000083223TUT710096.774ENSVPAG00000001946TUT79490.436Vicugna_pacos
ENSG00000083223TUT710096.235ENSVVUG00000022427TUT710087.284Vulpes_vulpes
ENSG00000083223TUT710080.645ENSXETG00000017552tut79077.725Xenopus_tropicalis
ENSG00000083223TUT78565.714ENSXCOG00000009445-8564.504Xiphophorus_couchianus
ENSG00000083223TUT78961.143ENSXMAG00000028804-9361.877Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000289nuclear-transcribed mRNA poly(A) tail shortening-TASProcess
GO:0001556oocyte maturation-ISSProcess
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005515protein binding30122351.IPIFunction
GO:0005654nucleoplasm-IDAComponent
GO:0005737cytoplasm30122351.IDAComponent
GO:0005829cytosol-IDAComponent
GO:0005829cytosol-TASComponent
GO:0008270zinc ion binding-IEAFunction
GO:0010526negative regulation of transposition, RNA-mediated30122351.IDAProcess
GO:0010586miRNA metabolic process25979828.IDAProcess
GO:0031054pre-miRNA processing25979828.IDAProcess
GO:0031123RNA 3'-end processing17353264.IDAProcess
GO:0035198miRNA binding28671666.IDAFunction
GO:0050265RNA uridylyltransferase activity17353264.25979828.28671666.IDAFunction
GO:0070569uridylyltransferase activity28671666.IDAFunction
GO:0071044histone mRNA catabolic process18172165.IMPProcess
GO:0071076RNA 3' uridylation28671666.IDAProcess
GO:0071076RNA 3' uridylation-ISSProcess
GO:1990074polyuridylation-dependent mRNA catabolic process-ISSProcess

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