EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000087269 (Gene tree)
Gene ID
8602
Gene Symbol
NOP14
Alias
RES4-25|UTP2|C4orf9|NOL14
Full Name
NOP14 nucleolar protein
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
25,574 bases
Position
chr4:2,937,933-2,963,506
Accession
16821
RBP type
canonical RBP
Summary
This gene encodes a protein that plays a role in pre-18s rRNA processing and small ribosomal subunit assembly. The encoded protein may be involved in the regulation of pancreatic cancer cell proliferation and migration. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2014]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000315674Nop14PF04147.121.1e-26511
ENSP00000405068Nop14PF04147.121.1e-26511
ENSP00000381146Nop14PF04147.123.5e-23711
ENSP00000427415Nop14PF04147.121.1e-23611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000502735NOP14-2042723-ENSP00000427415788 (aa)-E9PFK5
ENST00000398071NOP14-2022535-ENSP00000381146806 (aa)-P78316
ENST00000416614NOP14-2033538-ENSP00000405068857 (aa)-P78316
ENST00000507120NOP14-205703--- (aa)--
ENST00000314262NOP14-2012889-ENSP00000315674857 (aa)-P78316
Gene Model
Click here to download ENSG00000087269's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000087269Platelet Function Tests1.9259900E-005-
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000087269rs248881342962661?Educational attainment (years of education)30595370EFO_0004784
ENSG00000087269rs1684362942944754?Lung function (FVC)30595370EFO_0004312
ENSG00000087269rs203246342940261CCigarettes smoked per day (MTAG)30643251[0.0098-0.0185] unit decrease0.0141412EFO_0006525
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000087269's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000087269NOP145257.461ENSAPOG00000019863nop149657.449Acanthochromis_polyacanthus
ENSG00000087269NOP149680.340ENSAMEG00000014547NOP149980.340Ailuropoda_melanoleuca
ENSG00000087269NOP149655.795ENSACIG00000017590nop149756.702Amphilophus_citrinellus
ENSG00000087269NOP149757.565ENSAOCG00000004441nop149657.945Amphiprion_ocellaris
ENSG00000087269NOP145357.582ENSAPEG00000016589nop149657.637Amphiprion_percula
ENSG00000087269NOP149655.193ENSATEG00000016930nop149657.379Anabas_testudineus
ENSG00000087269NOP149965.017ENSAPLG00000006726NOP149965.808Anas_platyrhynchos
ENSG00000087269NOP149963.529ENSACAG00000005288NOP149963.139Anolis_carolinensis
ENSG00000087269NOP149790.811ENSANAG00000022601NOP149990.599Aotus_nancymaae
ENSG00000087269NOP145355.385ENSACLG00000006996nop149657.211Astatotilapia_calliptera
ENSG00000087269NOP145156.463ENSAMXG00000007533nop149656.679Astyanax_mexicanus
ENSG00000087269NOP149977.003ENSBTAG00000001504NOP149977.136Bos_taurus
ENSG00000087269NOP149789.857ENSCJAG00000014174NOP149989.659Callithrix_jacchus
ENSG00000087269NOP149979.671ENSCAFG00000014730NOP149979.671Canis_familiaris
ENSG00000087269NOP149979.671ENSCAFG00020012768NOP149979.671Canis_lupus_dingo
ENSG00000087269NOP1410076.370ENSCHIG00000026702NOP149976.355Capra_hircus
ENSG00000087269NOP149889.035ENSTSYG00000007417NOP149989.035Carlito_syrichta
ENSG00000087269NOP149179.693ENSCAPG00000008504NOP149879.693Cavia_aperea
ENSG00000087269NOP149979.009ENSCPOG00000012869NOP149979.009Cavia_porcellus
ENSG00000087269NOP149792.005ENSCCAG00000034221NOP149991.892Cebus_capucinus
ENSG00000087269NOP1410096.616ENSCATG00000032427NOP1410096.616Cercocebus_atys
ENSG00000087269NOP149979.837ENSCLAG00000008622NOP149980.420Chinchilla_lanigera
ENSG00000087269NOP149995.868ENSCSAG00000015804NOP149995.868Chlorocebus_sabaeus
ENSG00000087269NOP149970.418ENSCPBG00000013842NOP149870.960Chrysemys_picta_bellii
ENSG00000087269NOP149937.201ENSCING00000020812-9836.939Ciona_intestinalis
ENSG00000087269NOP149936.199ENSCSAVG00000001561-9143.923Ciona_savignyi
ENSG00000087269NOP149195.524ENSCANG00000006450NOP149995.524Colobus_angolensis_palliatus
ENSG00000087269NOP149982.339ENSCGRG00001009013Nop149682.807Cricetulus_griseus_chok1gshd
ENSG00000087269NOP149982.614ENSCGRG00000002554Nop149983.081Cricetulus_griseus_crigri
ENSG00000087269NOP145655.417ENSCSEG00000019893nop149655.841Cynoglossus_semilaevis
ENSG00000087269NOP149755.962ENSCVAG00000019406nop149656.444Cyprinodon_variegatus
ENSG00000087269NOP146652.137ENSDARG00000098859nop1410040.806Danio_rerio
ENSG00000087269NOP149975.410ENSDNOG00000040831-9975.323Dasypus_novemcinctus
ENSG00000087269NOP1410066.590ENSDNOG00000030915-9966.784Dasypus_novemcinctus
ENSG00000087269NOP149181.714ENSDORG00000001193Nop149682.097Dipodomys_ordii
ENSG00000087269NOP145132.054FBgn0010926l(3)078829833.029Drosophila_melanogaster
ENSG00000087269NOP147678.756ENSETEG00000017396NOP147478.756Echinops_telfairi
ENSG00000087269NOP149242.053ENSEBUG00000004689NOP148141.479Eptatretus_burgeri
ENSG00000087269NOP149984.788ENSEASG00005001906NOP149984.788Equus_asinus_asinus
ENSG00000087269NOP149985.259ENSECAG00000023951NOP149985.259Equus_caballus
ENSG00000087269NOP145156.364ENSELUG00000008107nop149657.971Esox_lucius
ENSG00000087269NOP149981.250ENSFCAG00000004601NOP149981.250Felis_catus
ENSG00000087269NOP149964.862ENSFALG00000009800NOP149965.116Ficedula_albicollis
ENSG00000087269NOP149980.778ENSFDAG00000017779NOP149980.425Fukomys_damarensis
ENSG00000087269NOP149756.147ENSFHEG00000004060nop149756.272Fundulus_heteroclitus
ENSG00000087269NOP147661.572ENSGMOG00000003607NOP149761.111Gadus_morhua
ENSG00000087269NOP145167.352ENSGALG00000015649NOP149965.358Gallus_gallus
ENSG00000087269NOP149455.105ENSGAFG00000011768nop149756.029Gambusia_affinis
ENSG00000087269NOP148267.713ENSGACG00000016531nop149067.713Gasterosteus_aculeatus
ENSG00000087269NOP149970.405ENSGAGG00000025266NOP149770.945Gopherus_agassizii
ENSG00000087269NOP1410098.366ENSGGOG00000011213NOP1410098.366Gorilla_gorilla
ENSG00000087269NOP145355.385ENSHBUG00000018508nop149657.109Haplochromis_burtoni
ENSG00000087269NOP149975.882ENSHGLG00000004991NOP149975.765Heterocephalus_glaber_female
ENSG00000087269NOP149980.565ENSHGLG00100012672NOP149975.765Heterocephalus_glaber_male
ENSG00000087269NOP145153.515ENSHCOG00000011995nop149752.928Hippocampus_comes
ENSG00000087269NOP145154.358ENSIPUG00000002699nop149754.742Ictalurus_punctatus
ENSG00000087269NOP149784.293ENSSTOG00000009739NOP149983.882Ictidomys_tridecemlineatus
ENSG00000087269NOP1410085.847ENSJJAG00000006861Nop149985.798Jaculus_jaculus
ENSG00000087269NOP145254.709ENSKMAG00000015165nop149657.330Kryptolebias_marmoratus
ENSG00000087269NOP149753.516ENSLBEG00000018666nop149754.217Labrus_bergylta
ENSG00000087269NOP149660.308ENSLACG00000011939NOP149661.237Latimeria_chalumnae
ENSG00000087269NOP149759.268ENSLOCG00000011611nop149659.785Lepisosteus_oculatus
ENSG00000087269NOP149979.811ENSLAFG00000017989NOP149979.811Loxodonta_africana
ENSG00000087269NOP149995.986ENSMFAG00000004046NOP149995.986Macaca_fascicularis
ENSG00000087269NOP149995.986ENSMMUG00000008385NOP149995.986Macaca_mulatta
ENSG00000087269NOP149995.986ENSMNEG00000039699NOP149995.986Macaca_nemestrina
ENSG00000087269NOP149992.326ENSMLEG00000037295NOP149992.326Mandrillus_leucophaeus
ENSG00000087269NOP149757.261ENSMAMG00000014358nop149657.228Mastacembelus_armatus
ENSG00000087269NOP149656.763ENSMZEG00005019659nop149656.707Maylandia_zebra
ENSG00000087269NOP149865.549ENSMGAG00000012970NOP149966.667Meleagris_gallopavo
ENSG00000087269NOP147081.894ENSMAUG00000011891Nop149882.558Mesocricetus_auratus
ENSG00000087269NOP149986.439ENSMICG00000007804NOP149986.792Microcebus_murinus
ENSG00000087269NOP1410083.197ENSMOCG00000021638Nop149983.471Microtus_ochrogaster
ENSG00000087269NOP145055.452ENSMMOG00000000248nop149654.535Mola_mola
ENSG00000087269NOP149874.970ENSMODG00000003736NOP149874.733Monodelphis_domestica
ENSG00000087269NOP149755.124ENSMALG00000020699nop149655.317Monopterus_albus
ENSG00000087269NOP149982.201MGP_CAROLIEiJ_G0027137Nop149982.553Mus_caroli
ENSG00000087269NOP149982.084ENSMUSG00000036693Nop149982.436Mus_musculus
ENSG00000087269NOP149981.330MGP_PahariEiJ_G0016921Nop149981.564Mus_pahari
ENSG00000087269NOP149982.553MGP_SPRETEiJ_G0028133Nop149982.904Mus_spretus
ENSG00000087269NOP149679.781ENSMPUG00000010899NOP149879.078Mustela_putorius_furo
ENSG00000087269NOP149975.818ENSMLUG00000010861NOP149976.051Myotis_lucifugus
ENSG00000087269NOP149981.265ENSNGAG00000023183Nop149981.616Nannospalax_galili
ENSG00000087269NOP149656.627ENSNBRG00000008215nop149656.569Neolamprologus_brichardi
ENSG00000087269NOP149398.377ENSNLEG00000000239NOP149998.377Nomascus_leucogenys
ENSG00000087269NOP149762.813ENSMEUG00000016104NOP149863.409Notamacropus_eugenii
ENSG00000087269NOP146677.027ENSOPRG00000009253-7077.209Ochotona_princeps
ENSG00000087269NOP149976.000ENSODEG00000011223NOP149976.498Octodon_degus
ENSG00000087269NOP145355.604ENSONIG00000014954nop149656.956Oreochromis_niloticus
ENSG00000087269NOP145763.283ENSOANG00000005809-10080.328Ornithorhynchus_anatinus
ENSG00000087269NOP149078.866ENSOCUG00000004725NOP1410078.737Oryctolagus_cuniculus
ENSG00000087269NOP149756.706ENSORLG00000005674nop149756.956Oryzias_latipes
ENSG00000087269NOP149956.207ENSORLG00020005701nop149956.678Oryzias_latipes_hni
ENSG00000087269NOP149755.995ENSORLG00015012355nop149755.699Oryzias_latipes_hsok
ENSG00000087269NOP149955.594ENSOMEG00000008357nop149956.410Oryzias_melastigma
ENSG00000087269NOP149985.478ENSOGAG00000011073NOP149985.478Otolemur_garnettii
ENSG00000087269NOP149177.197ENSOARG00000014516NOP149977.481Ovis_aries
ENSG00000087269NOP1410099.183ENSPPAG00000037688NOP1410099.183Pan_paniscus
ENSG00000087269NOP149979.953ENSPPRG00000012848NOP1410079.896Panthera_pardus
ENSG00000087269NOP148779.825ENSPTIG00000007085NOP149579.825Panthera_tigris_altaica
ENSG00000087269NOP1410093.916ENSPTRG00000015852NOP1410093.916Pan_troglodytes
ENSG00000087269NOP1410096.383ENSPANG00000009642NOP1410096.383Papio_anubis
ENSG00000087269NOP149656.532ENSPKIG00000009879nop149656.770Paramormyrops_kingsleyae
ENSG00000087269NOP147067.484ENSPSIG00000008187NOP149867.221Pelodiscus_sinensis
ENSG00000087269NOP149649.533ENSPMGG00000022904nop149650.588Periophthalmus_magnuspinnatus
ENSG00000087269NOP149984.570ENSPEMG00000005399Nop149985.159Peromyscus_maniculatus_bairdii
ENSG00000087269NOP149745.886ENSPMAG00000003297nop149645.486Petromyzon_marinus
ENSG00000087269NOP149876.241ENSPCIG00000028518NOP149875.768Phascolarctos_cinereus
ENSG00000087269NOP149757.434ENSPFOG00000009859nop149657.692Poecilia_formosa
ENSG00000087269NOP145157.500ENSPLAG00000010999nop149657.379Poecilia_latipinna
ENSG00000087269NOP145455.870ENSPMEG00000008718nop149656.907Poecilia_mexicana
ENSG00000087269NOP145455.652ENSPREG00000016921nop149657.227Poecilia_reticulata
ENSG00000087269NOP1410097.900ENSPPYG00000014549NOP1410097.900Pongo_abelii
ENSG00000087269NOP149271.302ENSPCAG00000016999NOP149971.811Procavia_capensis
ENSG00000087269NOP149787.349ENSPCOG00000027916NOP149987.028Propithecus_coquereli
ENSG00000087269NOP1410075.613ENSPVAG00000011306NOP149975.679Pteropus_vampyrus
ENSG00000087269NOP145156.621ENSPNYG00000008246nop149657.126Pundamilia_nyererei
ENSG00000087269NOP149755.830ENSPNAG00000025999nop149756.651Pygocentrus_nattereri
ENSG00000087269NOP149981.330ENSRNOG00000012147Nop149981.797Rattus_norvegicus
ENSG00000087269NOP149995.396ENSRBIG00000041250NOP149995.396Rhinopithecus_bieti
ENSG00000087269NOP149995.868ENSRROG00000045728NOP149995.868Rhinopithecus_roxellana
ENSG00000087269NOP149990.588ENSSBOG00000034906NOP149990.588Saimiri_boliviensis_boliviensis
ENSG00000087269NOP149974.443ENSSHAG00000010914NOP149974.209Sarcophilus_harrisii
ENSG00000087269NOP149660.166ENSSFOG00015022736nop149660.432Scleropages_formosus
ENSG00000087269NOP149754.620ENSSMAG00000005394nop149655.030Scophthalmus_maximus
ENSG00000087269NOP145456.277ENSSDUG00000015804nop149658.205Seriola_dumerili
ENSG00000087269NOP145455.844ENSSLDG00000007570nop149657.529Seriola_lalandi_dorsalis
ENSG00000087269NOP149368.329ENSSPUG00000013347NOP149769.388Sphenodon_punctatus
ENSG00000087269NOP145357.143ENSSPAG00000003486nop149657.788Stegastes_partitus
ENSG00000087269NOP1410078.413ENSSSCG00000008693NOP149978.276Sus_scrofa
ENSG00000087269NOP149765.988ENSTGUG00000010455NOP149966.989Taeniopygia_guttata
ENSG00000087269NOP149755.713ENSTRUG00000009735nop149656.383Takifugu_rubripes
ENSG00000087269NOP149756.647ENSTNIG00000018766nop149656.432Tetraodon_nigroviridis
ENSG00000087269NOP149179.693ENSTBEG00000013627NOP149979.693Tupaia_belangeri
ENSG00000087269NOP146585.294ENSTTRG00000009484NOP148881.013Tursiops_truncatus
ENSG00000087269NOP149979.245ENSUAMG00000016302NOP149979.245Ursus_americanus
ENSG00000087269NOP148392.000ENSUMAG00000006697NOP149392.000Ursus_maritimus
ENSG00000087269NOP149979.553ENSVVUG00000023936NOP149979.553Vulpes_vulpes
ENSG00000087269NOP149757.010ENSXETG00000014711nop149957.803Xenopus_tropicalis
ENSG00000087269NOP145355.263ENSXCOG00000002527nop149657.587Xiphophorus_couchianus
ENSG00000087269NOP145355.482ENSXMAG00000014137nop149657.313Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000447endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)-ISSProcess
GO:0000462maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)-ISSProcess
GO:0000472endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)-ISSProcess
GO:0000480endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)-ISSProcess
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0005634nucleus-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005730nucleolus-IDAComponent
GO:0005730nucleolus-ISSComponent
GO:0006364rRNA processing-ISSProcess
GO:0006364rRNA processing-TASProcess
GO:0016020membrane19946888.HDAComponent
GO:0019899enzyme binding23382074.IPIFunction
GO:0030515snoRNA binding-ISSFunction
GO:003068690S preribosome-ISSComponent
GO:0030692Noc4p-Nop14p complex21873635.IBAComponent
GO:0030692Noc4p-Nop14p complex-ISSComponent
GO:0032040small-subunit processome21873635.IBAComponent
GO:0032040small-subunit processome-ISSComponent
GO:0042274ribosomal small subunit biogenesis-ISSProcess

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