EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • PRI
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000089737 (Gene tree)
Gene ID
57062
Gene Symbol
DDX24
Alias
N
Full Name
DEAD-box helicase 24
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
32,955 bases
Position
chr14:94,048,291-94,081,245
Accession
13266
RBP type
canonical RBP
Summary
DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein, which shows little similarity to any of the other known human DEAD box proteins, but shows a high similarity to mouse Ddx24 at the amino acid level. [provided by RefSeq, Jul 2008]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000452145DEADPF00270.291.6e-3711
ENSP00000481495DEADPF00270.291.8e-3711
ENSP00000328690DEADPF00270.294.9e-3611
ENSP00000481317DEADPF00270.293.1e-2511
ENSP00000492621DEADPF00270.293.2e-2511
ENSP00000440623DEADPF00270.293.2e-2511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
29431736Capturing the interactome of newly transcribed RNAPolyT-RICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARIC & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
29431736Capturing the interactome of newly transcribed RNARICK & Hela2018 Feb 12Bao XDOI: 10.1038/nmeth.4595
22658674Insights into RNA biology from an atlas of mammalian mRNA-binding proteinsRIC & Hela2012 May 31Castello ADOI: 10.1016/j.cell.2012.04.031
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & Hela2018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & MCF10A2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & MCF72018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & U2OS2019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30352994Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome captureRIC & Jurkat2018 Oct 23Perez-Perri JIDOI:10.1038/s41467-018-06557-8
Protein-RNA interaction(RNA-Binding Site)
Click here to download all RNA binding sites
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000330836DDX24-2012738-ENSP00000328690804 (aa)-Q9GZR7
ENST00000555054DDX24-2052769-ENSP00000452145816 (aa)-G3V529
ENST00000556635DDX24-208656--- (aa)--
ENST00000555324DDX24-206810--- (aa)--
ENST00000555762DDX24-2075573--- (aa)--
ENST00000553400DDX24-203618--- (aa)--
ENST00000544005DDX24-2022214-ENSP00000440623609 (aa)-F5GYL3
ENST00000622786DDX24-2101730-ENSP00000481317485 (aa)-A0A087WXU8
ENST00000640432DDX24-2112580-ENSP00000492621577 (aa)-A0A1W2PRR2
ENST00000621632DDX24-2095612-ENSP00000481495859 (aa)-Q9GZR7
ENST00000553451DDX24-204486--- (aa)--
Gene Model
Click here to download ENSG00000089737's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000089737Bronchodilator Agents3E-626634245
ENSG00000089737Lung Volume Measurements3E-626634245
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000089737rs1119749861494067389TPost bronchodilator FEV1/FVC ratio26634245unit decrease0.051GO_0097366|EFO_0004713
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000089737's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000089737DDX247434.167ENSG00000213782DDX479138.889
ENSG00000089737DDX246331.613ENSG00000178105DDX105139.437
ENSG00000089737DDX246630.721ENSG00000108654DDX56840.496
ENSG00000089737DDX246531.307ENSG00000111364DDX558547.059
ENSG00000089737DDX245139.062ENSG00000124228DDX277838.028
ENSG00000089737DDX246633.028ENSG00000105671DDX498135.714
ENSG00000089737DDX246632.110ENSG00000215301DDX3X5936.567
ENSG00000089737DDX247230.252ENSG00000088205DDX189030.638
ENSG00000089737DDX246231.392ENSG00000183258DDX415740.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000089737DDX249469.214ENSAPOG00000014909ddx249751.914Acanthochromis_polyacanthus
ENSG00000089737DDX249492.779ENSAMEG00000015848DDX2410083.141Ailuropoda_melanoleuca
ENSG00000089737DDX249764.619ENSACIG00000024338ddx249555.779Amphilophus_citrinellus
ENSG00000089737DDX249468.559ENSAOCG00000006168ddx249751.844Amphiprion_ocellaris
ENSG00000089737DDX249467.904ENSAPEG00000023765ddx249552.032Amphiprion_percula
ENSG00000089737DDX249468.282ENSATEG00000022048ddx247958.012Anabas_testudineus
ENSG00000089737DDX249372.788ENSAPLG00000011111DDX249757.633Anas_platyrhynchos
ENSG00000089737DDX249370.824ENSACAG00000008545DDX249556.469Anolis_carolinensis
ENSG00000089737DDX2410096.495ENSANAG00000003080DDX2410096.495Aotus_nancymaae
ENSG00000089737DDX249366.667ENSACLG00000022194ddx249850.449Astatotilapia_calliptera
ENSG00000089737DDX249369.316ENSAMXG00000014635ddx247660.065Astyanax_mexicanus
ENSG00000089737DDX249392.905ENSBTAG00000003423DDX2410081.034Bos_taurus
ENSG00000089737DDX249442.060WBGene00018890F55F8.27451.765Caenorhabditis_elegans
ENSG00000089737DDX249997.495ENSCJAG00000009683DDX2410096.920Callithrix_jacchus
ENSG00000089737DDX249992.917ENSCAFG00000017624DDX2410081.301Canis_familiaris
ENSG00000089737DDX249992.917ENSCAFG00020014505DDX2410083.372Canis_lupus_dingo
ENSG00000089737DDX249990.377ENSCHIG00000010074DDX2410080.626Capra_hircus
ENSG00000089737DDX248883.295ENSTSYG00000025429-9882.838Carlito_syrichta
ENSG00000089737DDX249986.983ENSTSYG00000030376-9982.024Carlito_syrichta
ENSG00000089737DDX249490.372ENSCAPG00000007592DDX249282.017Cavia_aperea
ENSG00000089737DDX249491.685ENSCPOG00000005884DDX249781.175Cavia_porcellus
ENSG00000089737DDX249997.718ENSCCAG00000036112DDX2410097.331Cebus_capucinus
ENSG00000089737DDX249998.755ENSCATG00000038277DDX2410096.275Cercocebus_atys
ENSG00000089737DDX249492.527ENSCLAG00000011454DDX249982.093Chinchilla_lanigera
ENSG00000089737DDX249998.548ENSCSAG00000010975DDX2410096.624Chlorocebus_sabaeus
ENSG00000089737DDX248183.721ENSCHOG00000008649DDX248977.160Choloepus_hoffmanni
ENSG00000089737DDX249374.388ENSCPBG00000008942DDX249758.690Chrysemys_picta_bellii
ENSG00000089737DDX247648.187ENSCING00000003655-6772.727Ciona_intestinalis
ENSG00000089737DDX249147.166ENSCSAVG00000001436-7066.667Ciona_savignyi
ENSG00000089737DDX2410097.537ENSCANG00000035722-10096.391Colobus_angolensis_palliatus
ENSG00000089737DDX2410094.974ENSCANG00000031880-10094.974Colobus_angolensis_palliatus
ENSG00000089737DDX249491.410ENSCGRG00001009522Ddx249779.881Cricetulus_griseus_chok1gshd
ENSG00000089737DDX249491.410ENSCGRG00000015047Ddx249779.881Cricetulus_griseus_crigri
ENSG00000089737DDX249666.379ENSCSEG00000001004ddx247457.258Cynoglossus_semilaevis
ENSG00000089737DDX249366.150ENSCVAG00000005890ddx248763.711Cyprinodon_variegatus
ENSG00000089737DDX249463.181ENSDARG00000104708ddx247256.209Danio_rerio
ENSG00000089737DDX249989.834ENSDNOG00000005339DDX2410081.221Dasypus_novemcinctus
ENSG00000089737DDX249990.833ENSDORG00000003636Ddx249794.651Dipodomys_ordii
ENSG00000089737DDX249545.975FBgn0034496CG91435865.789Drosophila_melanogaster
ENSG00000089737DDX249189.091ENSETEG00000009693DDX249979.081Echinops_telfairi
ENSG00000089737DDX246855.000ENSEBUG00000015781-6355.000Eptatretus_burgeri
ENSG00000089737DDX249992.946ENSEASG00005021430DDX2410084.070Equus_asinus_asinus
ENSG00000089737DDX249992.516ENSECAG00000008887DDX249983.702Equus_caballus
ENSG00000089737DDX249989.979ENSEEUG00000001618DDX2410077.262Erinaceus_europaeus
ENSG00000089737DDX249368.142ENSELUG00000009567ddx249650.812Esox_lucius
ENSG00000089737DDX249492.998ENSFCAG00000010229DDX2410082.739Felis_catus
ENSG00000089737DDX249373.068ENSFALG00000002491DDX249758.323Ficedula_albicollis
ENSG00000089737DDX249989.605ENSFDAG00000014561DDX249981.935Fukomys_damarensis
ENSG00000089737DDX249467.325ENSFHEG00000010949ddx249251.257Fundulus_heteroclitus
ENSG00000089737DDX249663.539ENSGMOG00000010403ddx249749.704Gadus_morhua
ENSG00000089737DDX249572.138ENSGALG00000010884DDX249756.702Gallus_gallus
ENSG00000089737DDX249566.449ENSGAFG00000009607ddx249266.815Gambusia_affinis
ENSG00000089737DDX249664.606ENSGACG00000008087ddx249750.346Gasterosteus_aculeatus
ENSG00000089737DDX2410099.836ENSGGOG00000006739DDX2410099.534Gorilla_gorilla
ENSG00000089737DDX249466.447ENSHBUG00000021747ddx249849.944Haplochromis_burtoni
ENSG00000089737DDX249974.012ENSHGLG00000003177-9975.219Heterocephalus_glaber_female
ENSG00000089737DDX249389.800ENSHGLG00000010321-9990.745Heterocephalus_glaber_female
ENSG00000089737DDX249990.644ENSHGLG00100013439DDX249983.333Heterocephalus_glaber_male
ENSG00000089737DDX249566.013ENSHCOG00000019867ddx249750.464Hippocampus_comes
ENSG00000089737DDX248971.230ENSIPUG00000007005ddx249551.954Ictalurus_punctatus
ENSG00000089737DDX249992.516ENSSTOG00000005355DDX249983.372Ictidomys_tridecemlineatus
ENSG00000089737DDX249989.627ENSJJAG00000010842Ddx249980.372Jaculus_jaculus
ENSG00000089737DDX249465.275ENSKMAG00000004507ddx247556.601Kryptolebias_marmoratus
ENSG00000089737DDX249467.031ENSLBEG00000020888ddx247358.525Labrus_bergylta
ENSG00000089737DDX249470.769ENSLACG00000006072DDX249755.078Latimeria_chalumnae
ENSG00000089737DDX249569.063ENSLOCG00000012997ddx249753.618Lepisosteus_oculatus
ENSG00000089737DDX249590.929ENSLAFG00000029076DDX249781.829Loxodonta_africana
ENSG00000089737DDX249998.963ENSMFAG00000033695DDX2410096.857Macaca_fascicularis
ENSG00000089737DDX249998.755ENSMMUG00000007763DDX2410098.894Macaca_mulatta
ENSG00000089737DDX249998.755ENSMNEG00000043984DDX2410096.508Macaca_nemestrina
ENSG00000089737DDX2410097.865ENSMLEG00000039614DDX2410096.508Mandrillus_leucophaeus
ENSG00000089737DDX249566.523ENSMAMG00000003235ddx247357.964Mastacembelus_armatus
ENSG00000089737DDX249366.667ENSMZEG00005008402ddx249850.449Maylandia_zebra
ENSG00000089737DDX249373.009ENSMGAG00000013175DDX249757.812Meleagris_gallopavo
ENSG00000089737DDX249890.377ENSMAUG00000020026Ddx249778.979Mesocricetus_auratus
ENSG00000089737DDX249892.872ENSMICG00000008376DDX249989.391Microcebus_murinus
ENSG00000089737DDX249890.105ENSMOCG00000013171Ddx2410077.894Microtus_ochrogaster
ENSG00000089737DDX249964.792ENSMMOG00000013945ddx249666.518Mola_mola
ENSG00000089737DDX249274.330ENSMODG00000002336DDX249559.615Monodelphis_domestica
ENSG00000089737DDX249765.532ENSMALG00000007688ddx247358.569Monopterus_albus
ENSG00000089737DDX249888.889MGP_CAROLIEiJ_G0018053Ddx2410079.027Mus_caroli
ENSG00000089737DDX249888.260ENSMUSG00000041645Ddx2410078.862Mus_musculus
ENSG00000089737DDX249878.407MGP_SPRETEiJ_G0018898Ddx2410071.661Mus_spretus
ENSG00000089737DDX249492.998ENSMPUG00000003318DDX2410081.933Mustela_putorius_furo
ENSG00000089737DDX249492.088ENSMLUG00000001158DDX2410082.114Myotis_lucifugus
ENSG00000089737DDX249989.792ENSNGAG00000001003-9980.465Nannospalax_galili
ENSG00000089737DDX249983.958ENSNGAG00000014769-10075.116Nannospalax_galili
ENSG00000089737DDX249467.177ENSNBRG00000007296ddx249250.709Neolamprologus_brichardi
ENSG00000089737DDX2410091.681ENSNLEG00000017240DDX2410091.681Nomascus_leucogenys
ENSG00000089737DDX247977.749ENSMEUG00000010386-8377.749Notamacropus_eugenii
ENSG00000089737DDX249991.632ENSOPRG00000000562DDX2410079.490Ochotona_princeps
ENSG00000089737DDX249588.528ENSODEG00000002236-9988.939Octodon_degus
ENSG00000089737DDX249865.263ENSONIG00000020143ddx249751.606Oreochromis_niloticus
ENSG00000089737DDX249274.723ENSOANG00000014362DDX249958.706Ornithorhynchus_anatinus
ENSG00000089737DDX247632.468ENSOANG00000002839-10032.468Ornithorhynchus_anatinus
ENSG00000089737DDX249492.576ENSOCUG00000002604DDX249781.557Oryctolagus_cuniculus
ENSG00000089737DDX249667.241ENSORLG00000004581ddx249750.812Oryzias_latipes
ENSG00000089737DDX249667.026ENSORLG00020008743ddx249750.463Oryzias_latipes_hni
ENSG00000089737DDX249667.241ENSORLG00015007758ddx249751.160Oryzias_latipes_hsok
ENSG00000089737DDX249468.341ENSOMEG00000023149ddx249751.333Oryzias_melastigma
ENSG00000089737DDX249993.111ENSOGAG00000005841DDX2410085.236Otolemur_garnettii
ENSG00000089737DDX249889.727ENSOARG00000014341DDX2410079.862Ovis_aries
ENSG00000089737DDX2410099.343ENSPPAG00000038713DDX2410099.302Pan_paniscus
ENSG00000089737DDX249492.560ENSPPRG00000007394DDX2410082.584Panthera_pardus
ENSG00000089737DDX249991.097ENSPTIG00000013158DDX2410083.279Panthera_tigris_altaica
ENSG00000089737DDX2410099.343ENSPTRG00000006673DDX2410099.069Pan_troglodytes
ENSG00000089737DDX249998.755ENSPANG00000022385DDX2410096.740Papio_anubis
ENSG00000089737DDX249768.657ENSPKIG00000005168ddx249754.299Paramormyrops_kingsleyae
ENSG00000089737DDX249375.278ENSPSIG00000009329DDX249555.499Pelodiscus_sinensis
ENSG00000089737DDX249663.656ENSPMGG00000019572ddx249464.333Periophthalmus_magnuspinnatus
ENSG00000089737DDX249989.121ENSPEMG00000018618Ddx2410079.861Peromyscus_maniculatus_bairdii
ENSG00000089737DDX249273.884ENSPCIG00000026635DDX249558.423Phascolarctos_cinereus
ENSG00000089737DDX249466.886ENSPFOG00000011214ddx249465.122Poecilia_formosa
ENSG00000089737DDX249665.812ENSPLAG00000010940ddx249466.376Poecilia_latipinna
ENSG00000089737DDX249765.605ENSPMEG00000006458ddx249466.231Poecilia_mexicana
ENSG00000089737DDX249665.885ENSPREG00000014459ddx249366.231Poecilia_reticulata
ENSG00000089737DDX2410099.343ENSPPYG00000006095DDX2410098.952Pongo_abelii
ENSG00000089737DDX249888.703ENSPCAG00000002873DDX249982.334Procavia_capensis
ENSG00000089737DDX249991.130ENSPCOG00000018298DDX2410091.130Propithecus_coquereli
ENSG00000089737DDX249988.773ENSPVAG00000015101DDX249980.370Pteropus_vampyrus
ENSG00000089737DDX249466.447ENSPNYG00000022795ddx249850.056Pundamilia_nyererei
ENSG00000089737DDX249568.845ENSPNAG00000008956ddx248058.849Pygocentrus_nattereri
ENSG00000089737DDX249889.727ENSRNOG00000009166Ddx2410079.907Rattus_norvegicus
ENSG00000089737DDX2410097.537ENSRBIG00000039022DDX249998.551Rhinopithecus_bieti
ENSG00000089737DDX2410097.537ENSRROG00000023933-10096.275Rhinopithecus_roxellana
ENSG00000089737DDX2410094.454ENSRROG00000039473-10094.454Rhinopithecus_roxellana
ENSG00000089737DDX248633.264YBR142W-7336.486Saccharomyces_cerevisiae
ENSG00000089737DDX249997.095ENSSBOG00000035521DDX2410096.715Saimiri_boliviensis_boliviensis
ENSG00000089737DDX249871.429ENSSHAG00000009060DDX249559.326Sarcophilus_harrisii
ENSG00000089737DDX249468.571ENSSFOG00015015044ddx247658.466Scleropages_formosus
ENSG00000089737DDX249466.667ENSSMAG00000002784ddx247359.052Scophthalmus_maximus
ENSG00000089737DDX249566.523ENSSDUG00000001658ddx247658.958Seriola_dumerili
ENSG00000089737DDX249566.307ENSSLDG00000019202ddx247558.795Seriola_lalandi_dorsalis
ENSG00000089737DDX248190.840ENSSARG00000005126DDX247390.840Sorex_araneus
ENSG00000089737DDX249368.597ENSSPUG00000017730DDX249654.869Sphenodon_punctatus
ENSG00000089737DDX249467.467ENSSPAG00000011620ddx247558.333Stegastes_partitus
ENSG00000089737DDX249991.060ENSSSCG00000002470DDX249985.298Sus_scrofa
ENSG00000089737DDX249373.556ENSTGUG00000012637-9872.451Taeniopygia_guttata
ENSG00000089737DDX249564.052ENSTRUG00000006101ddx247554.649Takifugu_rubripes
ENSG00000089737DDX249464.317ENSTNIG00000017368ddx247764.509Tetraodon_nigroviridis
ENSG00000089737DDX247079.699ENSTBEG00000017648DDX246979.699Tupaia_belangeri
ENSG00000089737DDX249990.586ENSTTRG00000008795DDX2410082.019Tursiops_truncatus
ENSG00000089737DDX249584.532ENSUAMG00000024662DDX2410084.124Ursus_americanus
ENSG00000089737DDX249492.779ENSUMAG00000004481DDX2410083.276Ursus_maritimus
ENSG00000089737DDX246095.349ENSVPAG00000007012-6895.349Vicugna_pacos
ENSG00000089737DDX249992.739ENSVVUG00000018672DDX2410083.256Vulpes_vulpes
ENSG00000089737DDX249470.153ENSXETG00000010314ddx249953.452Xenopus_tropicalis
ENSG00000089737DDX249565.161ENSXMAG00000013600ddx248565.495Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding22658674.22681889.HDAFunction
GO:0003724RNA helicase activity10936056.NASFunction
GO:0005524ATP binding-IEAFunction
GO:0005730nucleolus-IDAComponent
GO:0016020membrane19946888.HDAComponent
GO:0016070RNA metabolic process10936056.NASProcess

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