EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • Phenotypes
  • GWAS
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000091732 (Gene tree)
Gene ID
51530
Gene Symbol
ZC3HC1
Alias
NIPA
Full Name
zinc finger C3HC-type containing 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Minus strand
Length
33,166 bases
Position
chr7:130,018,286-130,051,451
Accession
29913
RBP type
canonical RBP
Summary
This gene encodes an F-box-containing protein that is a component of an SCF-type E3 ubiquitin ligase complex that regulates the onset of cell division. The G2/M transition in the cell cycle requires the interaction of the proteins cyclin B1 and cyclin-dependent kinase 1. The activated ubiquitin ligase complex targets the protein cyclin B1 for degradation, preventing this transition to mitosis. [provided by RefSeq, Aug 2013]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000353933zf-C3HCPF07967.131.6e-3611
ENSP00000418533zf-C3HCPF07967.131.1e-3511
ENSP00000309301zf-C3HCPF07967.133.8e-3511
ENSP00000351052zf-C3HCPF07967.134.6e-3511
ENSP00000309301Rsm1PF08600.103.7e-1611
ENSP00000351052Rsm1PF08600.104.4e-1611
ENSP00000353933Rsm1PF08600.102.7e-1512
ENSP00000353933Rsm1PF08600.102.7e-1522
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000481503ZC3HC1-2091741XM_017012287ENSP00000418533459 (aa)XP_016867776C9J0I9
ENST00000483827ZC3HC1-210760-ENSP0000041768249 (aa)-F8WBD7
ENST00000484432ZC3HC1-211559-ENSP0000041721795 (aa)-F8WAU5
ENST00000471022ZC3HC1-206978--- (aa)--
ENST00000648450ZC3HC1-2122164-ENSP0000049816695 (aa)-UPI0001B79249
ENST00000477578ZC3HC1-207850--- (aa)--
ENST00000467642ZC3HC1-2041934-ENSP0000041950953 (aa)-F8WF13
ENST00000311873ZC3HC1-2012017-ENSP00000309301481 (aa)-Q86WB0
ENST00000470651ZC3HC1-205567-ENSP0000042006850 (aa)-F8WDK5
ENST00000360708ZC3HC1-2031676-ENSP00000353933431 (aa)-Q86WB0
ENST00000480193ZC3HC1-208563--- (aa)--
ENST00000358303ZC3HC1-2021972XM_005250403ENSP00000351052502 (aa)XP_005250460Q86WB0
Gene Model
Click here to download ENSG00000091732's gene model file
Phenotypes
ensgIDTraitpValuePubmed ID
ENSG00000091732Coronary Disease3E-1024262325
ENSG00000091732Coronary Disease8E-1024262325
ENSG00000091732Stroke8E-1024262325
ENSG00000091732Myocardial Infarction4E-826343387
ENSG00000091732Coronary Disease9E-1821378990
ENSG00000091732Coronary Disease9E-1024262325
ENSG00000091732Stroke9E-1024262325
ENSG00000091732Coronary Artery Disease5E-1126343387
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000091732rs115569247130023656TSystolic blood pressure27618452[0.18-0.36] mm Hg decrease0.2705EFO_0006335
ENSG00000091732rs115569247130023656TDiastolic blood pressure27618452[0.16-0.27] mm Hg decrease0.2141EFO_0006336
ENSG00000091732rs115569247130023656TSystolic blood pressure28739976[0.2-0.51] unit decrease0.356EFO_0006335
ENSG00000091732rs115569247130023656?Coronary artery disease24262325[1.06-1.12]1.0989EFO_0001645
ENSG00000091732rs115569247130023656?Coronary artery disease or ischemic stroke24262325EFO_0000712|EFO_0001645
ENSG00000091732rs115569247130023656?Coronary artery disease or large artery stroke24262325EFO_0005524|EFO_0001645
ENSG00000091732rs115569247130023656CCoronary artery disease26343387[1.05- 1.10]1.08EFO_0000378
ENSG00000091732rs115569247130023656CMyocardial infarction26343387[1.05-1.1]1.07EFO_0000612
ENSG00000091732rs115569247130023656TCoronary artery disease29212778[0.05-0.074] unit decrease0.062EFO_0000378
ENSG00000091732rs115569247130023656TCoronary artery disease29212778[0.05-0.074] unit decrease0.0618EFO_0000378
ENSG00000091732rs115569247130023656TCoronary artery disease29212778[0.045-0.07] unit decrease0.0575EFO_0000378
ENSG00000091732rs115569247130023656TCoronary artery disease29212778[0.044-0.066] unit decrease0.0548EFO_0000378
ENSG00000091732rs115569247130023656TWhite blood cell count (basophil)27863252[0.017-0.031] unit increase0.02430695EFO_0005090
ENSG00000091732rs115569247130023656TPlatelet count27863252[0.019-0.034] unit increase0.02635892EFO_0004309
ENSG00000091732rs115569247130023656TPlateletcrit27863252[0.015-0.029] unit increase0.02204853EFO_0007985
ENSG00000091732rs1862640567130037566CInterleukin-13 levels27989323[0.4-1.04] SD units increase0.7222EFO_0008171
ENSG00000091732rs115569247130023656CCoronary heart disease21378990[1.07-1.12]1.09EFO_0001645
ENSG00000091732rs115569247130023656?Menarche (age at onset)30595370EFO_0004703
ENSG00000091732rs115569247130023656?Red cell distribution width30595370EFO_0005192
ENSG00000091732rs115569247130023656?Cardiovascular disease30595370EFO_0000319
ENSG00000091732rs115569247130023656CDiastolic blood pressure27841878unit increase0.181EFO_0006336
ENSG00000091732rs115569247130023656CSystolic blood pressure27841878unit increase0.193EFO_0006335
ENSG00000091732rs561795637130045757?Eosinophil counts30595370EFO_0004842
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000091732's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000091732ZC3HC19347.416ENSAPOG00000009078zc3hc19543.293Acanthochromis_polyacanthus
ENSG00000091732ZC3HC19991.252ENSAMEG00000005425ZC3HC19991.252Ailuropoda_melanoleuca
ENSG00000091732ZC3HC19246.646ENSACIG00000019513zc3hc19542.455Amphilophus_citrinellus
ENSG00000091732ZC3HC19545.233ENSAOCG00000024310zc3hc19543.699Amphiprion_ocellaris
ENSG00000091732ZC3HC18951.636ENSAPEG00000004907zc3hc19543.699Amphiprion_percula
ENSG00000091732ZC3HC18548.349ENSATEG00000016898zc3hc18547.183Anabas_testudineus
ENSG00000091732ZC3HC19261.348ENSAPLG00000003832ZC3HC19961.348Anas_platyrhynchos
ENSG00000091732ZC3HC19461.983ENSACAG00000001638ZC3HC19461.983Anolis_carolinensis
ENSG00000091732ZC3HC19995.349ENSANAG00000022213ZC3HC19995.349Aotus_nancymaae
ENSG00000091732ZC3HC19045.333ENSACLG00000025033zc3hc19444.444Astatotilapia_calliptera
ENSG00000091732ZC3HC19346.789ENSAMXG00000036792zc3hc19744.628Astyanax_mexicanus
ENSG00000091732ZC3HC19991.218ENSBTAG00000011247ZC3HC19991.218Bos_taurus
ENSG00000091732ZC3HC19995.409ENSCJAG00000010536ZC3HC19995.409Callithrix_jacchus
ENSG00000091732ZC3HC19992.857ENSCAFG00000001499-9892.857Canis_familiaris
ENSG00000091732ZC3HC19993.014ENSCAFG00000029401-9893.014Canis_familiaris
ENSG00000091732ZC3HC19993.014ENSCAFG00000028735-9993.014Canis_familiaris
ENSG00000091732ZC3HC19993.014ENSCAFG00000031850-9993.014Canis_familiaris
ENSG00000091732ZC3HC19992.814ENSCAFG00020006829-9992.814Canis_lupus_dingo
ENSG00000091732ZC3HC19991.849ENSCAFG00020023333-9991.849Canis_lupus_dingo
ENSG00000091732ZC3HC110085.714ENSCHIG00000014103ZC3HC19984.830Capra_hircus
ENSG00000091732ZC3HC110093.878ENSTSYG00000002843ZC3HC19991.417Carlito_syrichta
ENSG00000091732ZC3HC19463.774ENSCAPG00000016300ZC3HC19280.233Cavia_aperea
ENSG00000091732ZC3HC19985.814ENSCPOG00000014034ZC3HC19985.814Cavia_porcellus
ENSG00000091732ZC3HC110091.837ENSCCAG00000020384ZC3HC19997.345Cebus_capucinus
ENSG00000091732ZC3HC110097.959ENSCATG00000023130ZC3HC19998.837Cercocebus_atys
ENSG00000091732ZC3HC110080.000ENSCLAG00000008260ZC3HC19967.102Chinchilla_lanigera
ENSG00000091732ZC3HC17698.904ENSCSAG00000009881ZC3HC19798.904Chlorocebus_sabaeus
ENSG00000091732ZC3HC19491.131ENSCHOG00000011846ZC3HC19991.131Choloepus_hoffmanni
ENSG00000091732ZC3HC19668.866ENSCPBG00000017519ZC3HC19967.793Chrysemys_picta_bellii
ENSG00000091732ZC3HC110097.959ENSCANG00000029091ZC3HC19998.605Colobus_angolensis_palliatus
ENSG00000091732ZC3HC19987.026ENSCGRG00001018805Zc3hc19987.026Cricetulus_griseus_chok1gshd
ENSG00000091732ZC3HC19985.828ENSCGRG00000017114Zc3hc19985.828Cricetulus_griseus_crigri
ENSG00000091732ZC3HC19643.200ENSCSEG00000009284zc3hc19442.600Cynoglossus_semilaevis
ENSG00000091732ZC3HC19542.355ENSCVAG00000011566zc3hc19441.582Cyprinodon_variegatus
ENSG00000091732ZC3HC19546.612ENSDARG00000062651zc3hc19545.996Danio_rerio
ENSG00000091732ZC3HC19989.820ENSDNOG00000045016ZC3HC19989.820Dasypus_novemcinctus
ENSG00000091732ZC3HC19978.643ENSDORG00000008697Zc3hc19978.643Dipodomys_ordii
ENSG00000091732ZC3HC19591.685ENSEASG00005008789ZC3HC19891.685Equus_asinus_asinus
ENSG00000091732ZC3HC19992.032ENSECAG00000017886ZC3HC19992.032Equus_caballus
ENSG00000091732ZC3HC19885.417ENSEEUG00000003123ZC3HC18385.093Erinaceus_europaeus
ENSG00000091732ZC3HC19443.699ENSELUG00000023168zc3hc19445.051Esox_lucius
ENSG00000091732ZC3HC19991.816ENSFCAG00000010429ZC3HC19991.816Felis_catus
ENSG00000091732ZC3HC19460.860ENSFALG00000005006ZC3HC19960.860Ficedula_albicollis
ENSG00000091732ZC3HC19987.674ENSFDAG00000019897ZC3HC19987.674Fukomys_damarensis
ENSG00000091732ZC3HC19543.096ENSFHEG00000020149zc3hc19941.096Fundulus_heteroclitus
ENSG00000091732ZC3HC19442.149ENSGMOG00000002914zc3hc19542.324Gadus_morhua
ENSG00000091732ZC3HC19763.211ENSGALG00000008003ZC3HC19963.211Gallus_gallus
ENSG00000091732ZC3HC19543.396ENSGAFG00000016095zc3hc19542.683Gambusia_affinis
ENSG00000091732ZC3HC19447.432ENSGACG00000019706zc3hc19445.492Gasterosteus_aculeatus
ENSG00000091732ZC3HC18170.000ENSGAGG00000016106ZC3HC19970.000Gopherus_agassizii
ENSG00000091732ZC3HC1100100.000ENSGGOG00000015504ZC3HC110099.602Gorilla_gorilla
ENSG00000091732ZC3HC19544.008ENSHBUG00000008347zc3hc19443.388Haplochromis_burtoni
ENSG00000091732ZC3HC19988.822ENSHGLG00000005085ZC3HC19988.822Heterocephalus_glaber_female
ENSG00000091732ZC3HC19988.623ENSHGLG00100011395ZC3HC19988.703Heterocephalus_glaber_male
ENSG00000091732ZC3HC19543.381ENSHCOG00000014309zc3hc19542.974Hippocampus_comes
ENSG00000091732ZC3HC19989.820ENSSTOG00000023599-9989.820Ictidomys_tridecemlineatus
ENSG00000091732ZC3HC19348.125ENSKMAG00000015315zc3hc18843.177Kryptolebias_marmoratus
ENSG00000091732ZC3HC19445.506ENSLBEG00000017325zc3hc19543.366Labrus_bergylta
ENSG00000091732ZC3HC18053.955ENSLACG00000013032ZC3HC19755.501Latimeria_chalumnae
ENSG00000091732ZC3HC19654.328ENSLOCG00000015963zc3hc19752.419Lepisosteus_oculatus
ENSG00000091732ZC3HC19990.099ENSLAFG00000001292ZC3HC19990.099Loxodonta_africana
ENSG00000091732ZC3HC19999.002ENSMFAG00000030176ZC3HC19999.002Macaca_fascicularis
ENSG00000091732ZC3HC110097.959ENSMMUG00000006155ZC3HC19998.837Macaca_mulatta
ENSG00000091732ZC3HC19999.202ENSMNEG00000011833ZC3HC199100.000Macaca_nemestrina
ENSG00000091732ZC3HC19999.070ENSMLEG00000027328ZC3HC19999.070Mandrillus_leucophaeus
ENSG00000091732ZC3HC19347.112ENSMAMG00000010691zc3hc19543.863Mastacembelus_armatus
ENSG00000091732ZC3HC19543.802ENSMZEG00005007142zc3hc19443.182Maylandia_zebra
ENSG00000091732ZC3HC19663.061ENSMGAG00000002977ZC3HC19763.673Meleagris_gallopavo
ENSG00000091732ZC3HC18581.884ENSMAUG00000017032Zc3hc19181.884Mesocricetus_auratus
ENSG00000091732ZC3HC19993.812ENSMICG00000009167ZC3HC19993.812Microcebus_murinus
ENSG00000091732ZC3HC19986.228ENSMOCG00000015239Zc3hc19986.228Microtus_ochrogaster
ENSG00000091732ZC3HC17952.991ENSMMOG00000002204zc3hc19842.094Mola_mola
ENSG00000091732ZC3HC19964.547ENSMODG00000014630ZC3HC19964.547Monodelphis_domestica
ENSG00000091732ZC3HC19345.326ENSMALG00000014447zc3hc19544.242Monopterus_albus
ENSG00000091732ZC3HC19985.743MGP_CAROLIEiJ_G0028183Zc3hc19985.743Mus_caroli
ENSG00000091732ZC3HC19985.542ENSMUSG00000039130Zc3hc19985.542Mus_musculus
ENSG00000091732ZC3HC19980.263MGP_PahariEiJ_G0021941Zc3hc19980.263Mus_pahari
ENSG00000091732ZC3HC19985.542MGP_SPRETEiJ_G0029183Zc3hc19985.542Mus_spretus
ENSG00000091732ZC3HC110087.755ENSMPUG00000005297ZC3HC19591.023Mustela_putorius_furo
ENSG00000091732ZC3HC19989.683ENSMLUG00000000063-9989.683Myotis_lucifugus
ENSG00000091732ZC3HC17085.131ENSMLUG00000029228-9985.131Myotis_lucifugus
ENSG00000091732ZC3HC19987.251ENSNGAG00000019014Zc3hc19987.251Nannospalax_galili
ENSG00000091732ZC3HC19544.099ENSNBRG00000004577zc3hc19443.478Neolamprologus_brichardi
ENSG00000091732ZC3HC110097.216ENSNLEG00000012698ZC3HC110097.216Nomascus_leucogenys
ENSG00000091732ZC3HC19879.919ENSMEUG00000011023ZC3HC19879.919Notamacropus_eugenii
ENSG00000091732ZC3HC110081.633ENSOPRG00000007867-6881.395Ochotona_princeps
ENSG00000091732ZC3HC19984.830ENSODEG00000014604ZC3HC19984.631Octodon_degus
ENSG00000091732ZC3HC19544.421ENSONIG00000011644zc3hc19443.802Oreochromis_niloticus
ENSG00000091732ZC3HC19470.065ENSOANG00000011460ZC3HC19970.065Ornithorhynchus_anatinus
ENSG00000091732ZC3HC19987.464ENSOCUG00000017137ZC3HC19986.310Oryctolagus_cuniculus
ENSG00000091732ZC3HC19446.269ENSORLG00000014409zc3hc19442.339Oryzias_latipes
ENSG00000091732ZC3HC19446.567ENSORLG00020015874zc3hc19443.173Oryzias_latipes_hni
ENSG00000091732ZC3HC19543.725ENSORLG00015014641zc3hc19442.972Oryzias_latipes_hsok
ENSG00000091732ZC3HC19545.791ENSOMEG00000000215zc3hc19445.010Oryzias_melastigma
ENSG00000091732ZC3HC19447.147ENSOMEG00000020604zc3hc19445.010Oryzias_melastigma
ENSG00000091732ZC3HC19987.226ENSOGAG00000026193ZC3HC19987.226Otolemur_garnettii
ENSG00000091732ZC3HC19991.545ENSOARG00000004907ZC3HC19891.468Ovis_aries
ENSG00000091732ZC3HC1100100.000ENSPPAG00000043172ZC3HC110099.801Pan_paniscus
ENSG00000091732ZC3HC19992.353ENSPPRG00000001004ZC3HC19991.018Panthera_pardus
ENSG00000091732ZC3HC19991.617ENSPTIG00000007823ZC3HC19991.617Panthera_tigris_altaica
ENSG00000091732ZC3HC110099.584ENSPTRG00000019685ZC3HC110099.584Pan_troglodytes
ENSG00000091732ZC3HC110097.959ENSPANG00000014229ZC3HC19998.837Papio_anubis
ENSG00000091732ZC3HC19450.629ENSPKIG00000007172zc3hc19548.755Paramormyrops_kingsleyae
ENSG00000091732ZC3HC19468.078ENSPSIG00000016646ZC3HC19960.938Pelodiscus_sinensis
ENSG00000091732ZC3HC19441.627ENSPMGG00000003548zc3hc19441.866Periophthalmus_magnuspinnatus
ENSG00000091732ZC3HC19986.627ENSPEMG00000000514Zc3hc19986.627Peromyscus_maniculatus_bairdii
ENSG00000091732ZC3HC19977.612ENSPCIG00000020619ZC3HC19979.381Phascolarctos_cinereus
ENSG00000091732ZC3HC19543.320ENSPFOG00000003466zc3hc19542.742Poecilia_formosa
ENSG00000091732ZC3HC19542.770ENSPLAG00000022211zc3hc19542.394Poecilia_latipinna
ENSG00000091732ZC3HC19543.177ENSPMEG00000001458zc3hc19542.799Poecilia_mexicana
ENSG00000091732ZC3HC19543.724ENSPREG00000004004zc3hc19542.799Poecilia_reticulata
ENSG00000091732ZC3HC1100100.000ENSPPYG00000017998ZC3HC110090.079Pongo_abelii
ENSG00000091732ZC3HC19486.726ENSPCAG00000001182ZC3HC19986.492Procavia_capensis
ENSG00000091732ZC3HC19994.611ENSPCOG00000017354ZC3HC19994.611Propithecus_coquereli
ENSG00000091732ZC3HC19985.429ENSPVAG00000003195ZC3HC19985.230Pteropus_vampyrus
ENSG00000091732ZC3HC19543.802ENSPNYG00000020692zc3hc19443.182Pundamilia_nyererei
ENSG00000091732ZC3HC19344.958ENSPNAG00000020746zc3hc19544.748Pygocentrus_nattereri
ENSG00000091732ZC3HC19985.458ENSRNOG00000010154Zc3hc19985.458Rattus_norvegicus
ENSG00000091732ZC3HC19498.673ENSRBIG00000029409ZC3HC19998.688Rhinopithecus_bieti
ENSG00000091732ZC3HC110097.959ENSRROG00000041831ZC3HC19998.605Rhinopithecus_roxellana
ENSG00000091732ZC3HC110093.878ENSSBOG00000032787ZC3HC19896.569Saimiri_boliviensis_boliviensis
ENSG00000091732ZC3HC19479.515ENSSHAG00000002529ZC3HC19978.664Sarcophilus_harrisii
ENSG00000091732ZC3HC19847.941ENSSFOG00015003667zc3hc19746.911Scleropages_formosus
ENSG00000091732ZC3HC19543.912ENSSMAG00000000647zc3hc18643.713Scophthalmus_maximus
ENSG00000091732ZC3HC19544.807ENSSDUG00000004241zc3hc19344.016Seriola_dumerili
ENSG00000091732ZC3HC19544.807ENSSLDG00000025056zc3hc19344.219Seriola_lalandi_dorsalis
ENSG00000091732ZC3HC19978.800ENSSARG00000012013ZC3HC19978.800Sorex_araneus
ENSG00000091732ZC3HC18463.776ENSSPUG00000000778ZC3HC18663.776Sphenodon_punctatus
ENSG00000091732ZC3HC19545.233ENSSPAG00000020041zc3hc19544.646Stegastes_partitus
ENSG00000091732ZC3HC19990.619ENSSSCG00000016565ZC3HC19991.495Sus_scrofa
ENSG00000091732ZC3HC15159.592ENSTGUG00000016262ZC3HC19959.592Taeniopygia_guttata
ENSG00000091732ZC3HC19248.243ENSTRUG00000020077zc3hc19442.562Takifugu_rubripes
ENSG00000091732ZC3HC19347.516ENSTNIG00000007585zc3hc110043.763Tetraodon_nigroviridis
ENSG00000091732ZC3HC110091.837ENSTBEG00000005216ZC3HC19983.034Tupaia_belangeri
ENSG00000091732ZC3HC19591.023ENSTTRG00000008458ZC3HC19991.023Tursiops_truncatus
ENSG00000091732ZC3HC19991.816ENSUAMG00000020249ZC3HC19991.816Ursus_americanus
ENSG00000091732ZC3HC19991.417ENSUMAG00000009268ZC3HC19991.417Ursus_maritimus
ENSG00000091732ZC3HC19885.417ENSVPAG00000010846ZC3HC17791.667Vicugna_pacos
ENSG00000091732ZC3HC19692.708ENSVVUG00000012386ZC3HC19992.708Vulpes_vulpes
ENSG00000091732ZC3HC19152.361ENSXETG00000033900zc3hc19552.361Xenopus_tropicalis
ENSG00000091732ZC3HC19542.449ENSXCOG00000013570zc3hc19343.947Xiphophorus_couchianus
ENSG00000091732ZC3HC19144.714ENSXMAG00000010979zc3hc19444.079Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005515protein binding16105984.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus-IDAComponent
GO:0007049cell cycle-IEAProcess
GO:0008270zinc ion binding-IEAFunction
GO:0016567protein ubiquitination-IEAProcess
GO:0019901protein kinase binding16105984.IPIFunction
GO:0031965nuclear membrane-IDAComponent
GO:0051301cell division-IEAProcess
GO:2001240negative regulation of extrinsic apoptotic signaling pathway in absence of ligand-IEAProcess

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