EuRBPDB

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  • Basic Information
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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000092847 (Gene tree)
Gene ID
26523
Gene Symbol
AGO1
Alias
hAGO1|EIF2C1
Full Name
argonaute RISC component 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Plus strand
Length
60,738 bases
Position
chr1:35,869,791-35,930,528
Accession
3262
RBP type
canonical RBP
Summary
This gene encodes a member of the argonaute family of proteins, which associate with small RNAs and have important roles in RNA interference (RNAi) and RNA silencing. This protein binds to microRNAs (miRNAs) or small interfering RNAs (siRNAs) and represses translation of mRNAs that are complementary to them. It is also involved in transcriptional gene silencing (TGS) of promoter regions that are complementary to bound short antigene RNAs (agRNAs), as well as in the degradation of miRNA-bound mRNA targets. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. A recent study showed this gene to be an authentic stop codon readthrough target, and that its mRNA could give rise to an additional C-terminally extended isoform by use of an alternative in-frame translation termination codon. [provided by RefSeq, Nov 2015]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000362300PAZPF02170.223.6e-2811
ENSP00000362302PAZPF02170.224.2e-2811
ENSP00000362302PiwiPF02171.173.7e-11011
ENSP00000362300PiwiPF02171.174.6e-11011
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
22681889The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts4SURIC & HEK2932012 MayBaltz AGDOI: 10.1016/j.molcel.2012.05.021
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
18635957The XS domain of a plant specific SGS3 protein adopts a unique RNA recognition motif (RRM) fold.Cell Cycle2008 Jul 15Zhang D-
16936726Argonaute-1 directs siRNA-mediated transcriptional gene silencing in human cells.Nat Struct Mol Biol2006 SepKim DH-
26641460Formation of Potato Virus A-Induced RNA Granules and Viral Translation Are Interrelated Processes Required for Optimal Virus Accumulation.PLoS Pathog2015 Dec 7Hafren Adoi: 10.1371/journal.ppat.1005314
28499009A viral suppressor of RNA silencing inhibits ARGONAUTE 1 function by precluding target RNA binding to pre-assembled RISC.Nucleic Acids Res2017 Jul 27Kenesi Edoi: 10.1093/nar/gkx379.
19861421The Arabidopsis thaliana double-stranded RNA binding protein DRB1 directs guide strand selection from microRNA duplexes.RNA2009 DecEamens ALdoi: 10.1261/rna.1646909
19763164Redundant and specific roles of the ARGONAUTE proteins AGO1 and ZLL in development and small RNA-directed gene silencing.PLoS Genet2009 SepMallory ACdoi: 10.1371/journal.pgen.1000646
21878547Argonaute protein identity and pairing geometry determine cooperativity in mammalian RNA silencing.RNA2011 OctBroderick JAdoi: 10.1261/rna.2778911
22025453Expression levels of the microRNA maturing microprocessor complex component DGCR8 and the RNA-induced silencing complex (RISC) components argonaute-1, argonaute-2, PACT, TARBP1, and TARBP2 in epithelial skin cancer.Mol Carcinog2012 NovSand Mdoi: 10.1002/mc.20861
23184089microRNA-independent recruitment of Argonaute 1 to nanos mRNA through the Smaug RNA-binding protein.EMBO Rep2013 JanPinder BDdoi: 10.1038/embor.2012.192
25480915Coordinate control of terminal dendrite patterning and dynamics by the membrane protein Raw.Development2015 Jan 1Lee Jdoi: 10.1242/dev.113423
28634830The microRNA effector RNA-induced silencing complex in hidradenitis suppurativa: a significant dysregulation within active inflammatory lesions.Arch Dermatol Res2017 SepHessam Sdoi: 10.1007/s00403-017-1752-1
29396181Argonaute 2 Is Required for Extra-embryonic Endoderm Differentiation of Mouse Embryonic Stem Cells.Stem Cell Reports2018 Feb 13Ngondo RPdoi: 10.1016/j.stemcr.2017.12.023
16287716Slicer function of Drosophila Argonautes and its involvement in RISC formation.Genes Dev2005 Dec 1Miyoshi K-
19394293An alpha motif at Tas3 C terminus mediates RITS cis spreading and promotes heterochromatic gene silencing.Mol Cell2009 Apr 24Li Hdoi: 10.1016/j.molcel.2009.02.032.
22363633Small RNAs targeting transcription start site induce heparanase silencing through interference with transcription initiation in human cancer cells.PLoS One2012Jiang Gdoi: 10.1371/journal.pone.0031379
22045333Cyclophilin 40 facilitates HSP90-mediated RISC assembly in plants.EMBO J2012 Jan 18Iki Tdoi: 10.1038/emboj.2011.395
21646546Crystal structure of the MID-PIWI lobe of a eukaryotic Argonaute protein.Proc Natl Acad Sci U S A2011 Jun 28Boland Adoi: 10.1073/pnas.1103946108
24092744Fungal small RNAs suppress plant immunity by hijacking host RNA interference pathways.Science2013 Oct 4Weiberg Adoi: 10.1126/science.1239705.
24062160Independent parallel functions of p19 plant viral suppressor of RNA silencing required for effective suppressor activity.Nucleic Acids Res2014 JanVarallyay edoi: 10.1093/nar/gkt846
28325872Small RNA-mediated repair of UV-induced DNA lesions by the DNA DAMAGE-BINDING PROTEIN 2 and ARGONAUTE 1.Proc Natl Acad Sci U S A2017 Apr 4Schalk Cdoi: 10.1073/pnas.1618834114
27543392Alfalfa dwarf cytorhabdovirus P protein is a local and systemic RNA silencing supressor which inhibits programmed RISC activity and prevents transitive amplification of RNA silencing.Virus Res2016 Sep 15Bejerman Ndoi: 10.1016/j.virusres.2016.08.008
26355083Requirement for Host RNA-Silencing Components and the Virus-Silencing Suppressor when Second-Site Mutations Compensate for Structural Defects in the 3' Untranslated Region.J Virol2015 NovChattopadhyay Mdoi: 10.1128/JVI.01566-15
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000373206AGO1-2023996XM_017001018ENSP00000362302782 (aa)XP_016856507Q5TA58
ENST00000635259AGO1-2032836-ENSP00000489254133 (aa)-A0A0U1RQZ8
ENST00000373204AGO1-20113708XM_011541236ENSP00000362300857 (aa)XP_011539538Q9UL18
Gene Model
Click here to download ENSG00000092847's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000092847's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000092847AGO110084.802ENSG00000123908AGO210083.333
ENSG00000092847AGO110084.131ENSG00000134698AGO49983.489
ENSG00000092847AGO110085.461ENSG00000126070AGO310089.617
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000092847AGO110097.187ENSAPOG00000024299ago19896.916Acanthochromis_polyacanthus
ENSG00000092847AGO1100100.000ENSAMEG00000000504AGO1100100.000Ailuropoda_melanoleuca
ENSG00000092847AGO19092.023ENSACIG00000005298ago19892.023Amphilophus_citrinellus
ENSG00000092847AGO110097.187ENSAOCG00000017727ago19896.916Amphiprion_ocellaris
ENSG00000092847AGO110097.187ENSAPEG00000004458ago19996.576Amphiprion_percula
ENSG00000092847AGO110097.187ENSATEG00000008523ago19896.916Anabas_testudineus
ENSG00000092847AGO110093.257ENSAPLG00000010440AGO19893.794Anas_platyrhynchos
ENSG00000092847AGO110099.872ENSACAG00000029174AGO110099.872Anolis_carolinensis
ENSG00000092847AGO1100100.000ENSANAG00000037711AGO1100100.000Aotus_nancymaae
ENSG00000092847AGO110097.059ENSACLG00000000890ago19896.679Astatotilapia_calliptera
ENSG00000092847AGO18898.542ENSAMXG00000001917ago19898.542Astyanax_mexicanus
ENSG00000092847AGO110099.883ENSBTAG00000012253AGO110099.883Bos_taurus
ENSG00000092847AGO1100100.000ENSCJAG00000032023AGO1100100.000Callithrix_jacchus
ENSG00000092847AGO1100100.000ENSCAFG00000003443AGO1100100.000Canis_familiaris
ENSG00000092847AGO1100100.000ENSCAFG00020009251AGO19999.683Canis_lupus_dingo
ENSG00000092847AGO110099.488ENSCHIG00000011848-10099.072Capra_hircus
ENSG00000092847AGO1100100.000ENSTSYG00000009767-100100.000Carlito_syrichta
ENSG00000092847AGO110078.772ENSTSYG00000032426-9979.499Carlito_syrichta
ENSG00000092847AGO18993.983ENSCAPG00000010228AGO19993.111Cavia_aperea
ENSG00000092847AGO1100100.000ENSCPOG00000011568AGO1100100.000Cavia_porcellus
ENSG00000092847AGO1100100.000ENSCCAG00000011823AGO1100100.000Cebus_capucinus
ENSG00000092847AGO1100100.000ENSCATG00000031521AGO1100100.000Cercocebus_atys
ENSG00000092847AGO1100100.000ENSCLAG00000011507AGO1100100.000Chinchilla_lanigera
ENSG00000092847AGO1100100.000ENSCSAG00000001091AGO1100100.000Chlorocebus_sabaeus
ENSG00000092847AGO18594.574ENSCHOG00000011591AGO18694.574Choloepus_hoffmanni
ENSG00000092847AGO110099.872ENSCPBG00000018594AGO110099.767Chrysemys_picta_bellii
ENSG00000092847AGO1100100.000ENSCANG00000039798AGO1100100.000Colobus_angolensis_palliatus
ENSG00000092847AGO1100100.000ENSCGRG00001022708Ago1100100.000Cricetulus_griseus_chok1gshd
ENSG00000092847AGO1100100.000ENSCGRG00000010386Ago1100100.000Cricetulus_griseus_crigri
ENSG00000092847AGO110095.358ENSCSEG00000001051ago19994.780Cynoglossus_semilaevis
ENSG00000092847AGO110097.187ENSCVAG00000018173ago19896.916Cyprinodon_variegatus
ENSG00000092847AGO110097.315ENSDARG00000092644ago19896.923Danio_rerio
ENSG00000092847AGO1100100.000ENSDNOG00000008077AGO1100100.000Dasypus_novemcinctus
ENSG00000092847AGO19398.820ENSDORG00000008494Ago1100100.000Dipodomys_ordii
ENSG00000092847AGO18493.204ENSETEG00000007626AGO110093.204Echinops_telfairi
ENSG00000092847AGO1100100.000ENSEASG00005012086AGO1100100.000Equus_asinus_asinus
ENSG00000092847AGO1100100.000ENSECAG00000024353AGO1100100.000Equus_caballus
ENSG00000092847AGO110091.560ENSEEUG00000005349AGO19291.614Erinaceus_europaeus
ENSG00000092847AGO110097.059ENSELUG00000016803ago110097.059Esox_lucius
ENSG00000092847AGO1100100.000ENSFCAG00000000746AGO1100100.000Felis_catus
ENSG00000092847AGO110092.219ENSFALG00000000790AGO110092.219Ficedula_albicollis
ENSG00000092847AGO1100100.000ENSFDAG00000017210AGO110099.883Fukomys_damarensis
ENSG00000092847AGO19697.460ENSFHEG00000017927ago19993.001Fundulus_heteroclitus
ENSG00000092847AGO19684.646ENSGMOG00000019413ago110084.646Gadus_morhua
ENSG00000092847AGO110099.883ENSGALG00000002249AGO110099.883Gallus_gallus
ENSG00000092847AGO110097.187ENSGAFG00000009775ago19896.916Gambusia_affinis
ENSG00000092847AGO19697.204ENSGACG00000012443ago110097.204Gasterosteus_aculeatus
ENSG00000092847AGO110099.872ENSGAGG00000012893-10099.872Gopherus_agassizii
ENSG00000092847AGO1100100.000ENSGGOG00000003316AGO1100100.000Gorilla_gorilla
ENSG00000092847AGO110097.059ENSHBUG00000010459ago19896.679Haplochromis_burtoni
ENSG00000092847AGO1100100.000ENSHGLG00000011540AGO1100100.000Heterocephalus_glaber_female
ENSG00000092847AGO1100100.000ENSHGLG00100005568AGO1100100.000Heterocephalus_glaber_male
ENSG00000092847AGO110097.187ENSHCOG00000005708ago19996.576Hippocampus_comes
ENSG00000092847AGO110096.931ENSIPUG00000023216ago19896.686Ictalurus_punctatus
ENSG00000092847AGO1100100.000ENSSTOG00000010857AGO1100100.000Ictidomys_tridecemlineatus
ENSG00000092847AGO1100100.000ENSJJAG00000019449Ago110099.883Jaculus_jaculus
ENSG00000092847AGO110097.187ENSKMAG00000019464ago19896.916Kryptolebias_marmoratus
ENSG00000092847AGO110097.187ENSLBEG00000007694ago19896.916Labrus_bergylta
ENSG00000092847AGO110093.240ENSLACG00000017009AGO19993.625Latimeria_chalumnae
ENSG00000092847AGO110094.501ENSLOCG00000000504AGO19894.662Lepisosteus_oculatus
ENSG00000092847AGO1100100.000ENSLAFG00000010835AGO199100.000Loxodonta_africana
ENSG00000092847AGO1100100.000ENSMFAG00000002846AGO1100100.000Macaca_fascicularis
ENSG00000092847AGO110095.013ENSMMUG00000006251AGO110095.255Macaca_mulatta
ENSG00000092847AGO1100100.000ENSMNEG00000028881AGO1100100.000Macaca_nemestrina
ENSG00000092847AGO1100100.000ENSMLEG00000038388AGO1100100.000Mandrillus_leucophaeus
ENSG00000092847AGO110097.187ENSMAMG00000008381ago19896.916Mastacembelus_armatus
ENSG00000092847AGO110097.059ENSMZEG00005007996ago19896.679Maylandia_zebra
ENSG00000092847AGO110094.043ENSMGAG00000003822AGO19994.484Meleagris_gallopavo
ENSG00000092847AGO1100100.000ENSMAUG00000015189Ago1100100.000Mesocricetus_auratus
ENSG00000092847AGO1100100.000ENSMICG00000016147AGO1100100.000Microcebus_murinus
ENSG00000092847AGO110099.883ENSMOCG00000000537Ago110099.883Microtus_ochrogaster
ENSG00000092847AGO18698.657ENSMMOG00000018459ago19398.657Mola_mola
ENSG00000092847AGO110099.744ENSMODG00000023335AGO110099.650Monodelphis_domestica
ENSG00000092847AGO110097.059ENSMALG00000011057ago19996.797Monopterus_albus
ENSG00000092847AGO1100100.000MGP_CAROLIEiJ_G0026478Ago1100100.000Mus_caroli
ENSG00000092847AGO1100100.000ENSMUSG00000041530Ago1100100.000Mus_musculus
ENSG00000092847AGO1100100.000MGP_PahariEiJ_G0028809Ago1100100.000Mus_pahari
ENSG00000092847AGO1100100.000MGP_SPRETEiJ_G0027457Ago1100100.000Mus_spretus
ENSG00000092847AGO192100.000ENSMPUG00000014872AGO1100100.000Mustela_putorius_furo
ENSG00000092847AGO170100.000ENSMLUG00000009628AGO19999.617Myotis_lucifugus
ENSG00000092847AGO1100100.000ENSNGAG00000017448Ago110099.767Nannospalax_galili
ENSG00000092847AGO110097.059ENSNBRG00000010867ago110097.059Neolamprologus_brichardi
ENSG00000092847AGO1100100.000ENSNLEG00000011181AGO110099.883Nomascus_leucogenys
ENSG00000092847AGO191100.000ENSMEUG00000013429AGO191100.000Notamacropus_eugenii
ENSG00000092847AGO193100.000ENSOPRG00000012325AGO193100.000Ochotona_princeps
ENSG00000092847AGO1100100.000ENSODEG00000005321AGO1100100.000Octodon_degus
ENSG00000092847AGO110097.059ENSONIG00000016345ago19996.679Oreochromis_niloticus
ENSG00000092847AGO110091.003ENSOANG00000002080AGO110091.977Ornithorhynchus_anatinus
ENSG00000092847AGO110099.883ENSOCUG00000023116AGO110099.883Oryctolagus_cuniculus
ENSG00000092847AGO110097.187ENSORLG00000014965ago19896.916Oryzias_latipes
ENSG00000092847AGO110097.187ENSORLG00020018253ago19896.916Oryzias_latipes_hni
ENSG00000092847AGO110097.187ENSORLG00015003287ago19896.916Oryzias_latipes_hsok
ENSG00000092847AGO110097.187ENSOMEG00000020528ago19896.916Oryzias_melastigma
ENSG00000092847AGO1100100.000ENSOGAG00000010279AGO199100.000Otolemur_garnettii
ENSG00000092847AGO110099.883ENSOARG00000019591AGO110099.883Ovis_aries
ENSG00000092847AGO1100100.000ENSPPAG00000034838AGO1100100.000Pan_paniscus
ENSG00000092847AGO1100100.000ENSPPRG00000006475AGO1100100.000Panthera_pardus
ENSG00000092847AGO110099.767ENSPTIG00000020991AGO110099.767Panthera_tigris_altaica
ENSG00000092847AGO1100100.000ENSPTRG00000000528AGO1100100.000Pan_troglodytes
ENSG00000092847AGO1100100.000ENSPANG00000009060AGO1100100.000Papio_anubis
ENSG00000092847AGO110098.980ENSPSIG00000017482AGO110099.050Pelodiscus_sinensis
ENSG00000092847AGO18897.384ENSPMGG00000024099ago19897.384Periophthalmus_magnuspinnatus
ENSG00000092847AGO1100100.000ENSPEMG00000023313Ago1100100.000Peromyscus_maniculatus_bairdii
ENSG00000092847AGO110099.744ENSPCIG00000000172AGO110099.650Phascolarctos_cinereus
ENSG00000092847AGO110097.187ENSPFOG00000005867ago19896.916Poecilia_formosa
ENSG00000092847AGO110097.187ENSPLAG00000002824ago19998.119Poecilia_latipinna
ENSG00000092847AGO110097.187ENSPMEG00000001787ago19998.119Poecilia_mexicana
ENSG00000092847AGO110097.187ENSPREG00000006534ago19896.916Poecilia_reticulata
ENSG00000092847AGO1100100.000ENSPPYG00000001551AGO1100100.000Pongo_abelii
ENSG00000092847AGO158100.000ENSPCAG00000005604AGO166100.000Procavia_capensis
ENSG00000092847AGO1100100.000ENSPCOG00000022061AGO1100100.000Propithecus_coquereli
ENSG00000092847AGO1100100.000ENSPVAG00000005082AGO1100100.000Pteropus_vampyrus
ENSG00000092847AGO110092.219ENSPNYG00000012586ago110092.219Pundamilia_nyererei
ENSG00000092847AGO19592.246ENSPNAG00000000597ago19992.356Pygocentrus_nattereri
ENSG00000092847AGO110099.883ENSRNOG00000055915Ago110099.883Rattus_norvegicus
ENSG00000092847AGO1100100.000ENSRBIG00000032611AGO1100100.000Rhinopithecus_bieti
ENSG00000092847AGO1100100.000ENSRROG00000044469AGO1100100.000Rhinopithecus_roxellana
ENSG00000092847AGO1100100.000ENSSBOG00000020867AGO1100100.000Saimiri_boliviensis_boliviensis
ENSG00000092847AGO110098.726ENSSHAG00000017468AGO110098.480Sarcophilus_harrisii
ENSG00000092847AGO110097.059ENSSFOG00015020982ago19798.121Scleropages_formosus
ENSG00000092847AGO110097.187ENSSMAG00000002841ago19896.797Scophthalmus_maximus
ENSG00000092847AGO110097.187ENSSDUG00000010864ago19896.916Seriola_dumerili
ENSG00000092847AGO110097.187ENSSLDG00000000386ago19896.916Seriola_lalandi_dorsalis
ENSG00000092847AGO174100.000ENSSARG00000011520AGO174100.000Sorex_araneus
ENSG00000092847AGO110099.744ENSSPUG00000000836AGO110099.646Sphenodon_punctatus
ENSG00000092847AGO110097.187ENSSPAG00000019154ago19896.916Stegastes_partitus
ENSG00000092847AGO110096.442ENSTRUG00000024431ago110096.442Takifugu_rubripes
ENSG00000092847AGO110096.935ENSTNIG00000012102ago19896.454Tetraodon_nigroviridis
ENSG00000092847AGO18999.423ENSTBEG00000016514AGO110099.445Tupaia_belangeri
ENSG00000092847AGO110098.338ENSTTRG00000015088AGO110098.250Tursiops_truncatus
ENSG00000092847AGO1100100.000ENSUAMG00000027154AGO1100100.000Ursus_americanus
ENSG00000092847AGO110096.292ENSUMAG00000002480AGO19996.226Ursus_maritimus
ENSG00000092847AGO19198.743ENSVPAG00000006663AGO110092.289Vicugna_pacos
ENSG00000092847AGO1100100.000ENSVVUG00000000405AGO1100100.000Vulpes_vulpes
ENSG00000092847AGO110098.469ENSXETG00000004364ago110098.021Xenopus_tropicalis
ENSG00000092847AGO110096.419ENSXCOG00000007669ago110096.419Xiphophorus_couchianus
ENSG00000092847AGO110097.187ENSXMAG00000021899ago19896.916Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000932P-body-IEAComponent
GO:0000956nuclear-transcribed mRNA catabolic process18771919.IDAProcess
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding-IEAFunction
GO:0000993RNA polymerase II complex binding25336585.IDAFunction
GO:0001047core promoter binding25336585.IMPFunction
GO:0003723RNA binding22681889.HDAFunction
GO:0003723RNA binding23809764.IDAFunction
GO:0003725double-stranded RNA binding19966796.IDAFunction
GO:0003727single-stranded RNA binding19966796.IDAFunction
GO:0004521endoribonuclease activity23809764.IDAFunction
GO:0005515protein binding12526743.16289642.16756390.17891150.17932509.18482256.19167051.19324964.19383768.19716330.20616046.22484317.22915799.25036637.25336585.28330616.IPIFunction
GO:0005634nucleus25336585.ICComponent
GO:0005654nucleoplasm-TASComponent
GO:0005737cytoplasm15260970.20014101.IDAComponent
GO:0005829cytosol-TASComponent
GO:0005844polysome17932509.IDAComponent
GO:0007223Wnt signaling pathway, calcium modulating pathway-TASProcess
GO:0010501RNA secondary structure unwinding19966796.IDAProcess
GO:0010501RNA secondary structure unwinding22795694.IMPProcess
GO:0010586miRNA metabolic process-IEAProcess
GO:0010628positive regulation of gene expression-TASProcess
GO:0010629negative regulation of gene expression-TASProcess
GO:0016442RISC complex15260970.19966796.IDAComponent
GO:0016525negative regulation of angiogenesis23426184.IMPProcess
GO:0031054pre-miRNA processing19966796.IDAProcess
GO:0035068micro-ribonucleoprotein complex17932509.IDAComponent
GO:0035194posttranscriptional gene silencing by RNA-TASProcess
GO:0035196production of miRNAs involved in gene silencing by miRNA22795694.IMPProcess
GO:0035198miRNA binding15260970.IDAFunction
GO:0035278miRNA mediated inhibition of translation18771919.IDAProcess
GO:0035279mRNA cleavage involved in gene silencing by miRNA15260970.IDAProcess
GO:0035280miRNA loading onto RISC involved in gene silencing by miRNA19966796.IDAProcess
GO:0045652regulation of megakaryocyte differentiation-TASProcess
GO:0045944positive regulation of transcription by RNA polymerase II25336585.IMPProcess
GO:0060964regulation of gene silencing by miRNA-TASProcess
GO:0070578RISC-loading complex19966796.IDAComponent
GO:0090502RNA phosphodiester bond hydrolysis, endonucleolytic-IEAProcess
GO:0090625mRNA cleavage involved in gene silencing by siRNA15260970.IDAProcess
GO:1901224positive regulation of NIK/NF-kappaB signaling-IEAProcess
GO:1990904ribonucleoprotein complex17932509.IDAComponent

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
23426184Hypoxia-responsive miRNAs target argonaute 1 to promote angiogenesis.J Clin Invest2013 MarChen Zdoi: 10.1172/JCI65344
20721975Association of a common AGO1 variant with lung cancer risk: a two-stage case-control study.Mol Carcinog2010 OctKim JSdoi: 10.1002/mc.20672.
27669275Polymorphisms in GEMIN4 and AGO1 Genes Are Associated with the Risk of Lung Cancer: A Case-Control Study in Chinese Female Non-Smokers.Int J Environ Res Public Health2016 Sep 23Fang Xdoi: 10.3390/ijerph13100939.
30858133Targeting high transcriptional control activity of long mononucleotide A-T repeats in cancer by Argonaute 1.Gene2019 May 30Pin-On Pdoi: 10.1016/j.gene.2019.03.010
22025453Expression levels of the microRNA maturing microprocessor complex component DGCR8 and the RNA-induced silencing complex (RISC) components argonaute-1, argonaute-2, PACT, TARBP1, and TARBP2 in epithelial skin cancer.Mol Carcinog2012 NovSand Mdoi: 10.1002/mc.20861
25656609EIF2C, Dicer, and Drosha are up-regulated along tumor progression and associated with poor prognosis in bladder carcinoma.Tumour Biol2015 JulZhang Zdoi: 10.1007/s13277-015-3158-z
19723326mRNA expression profiles show differential regulatory effects of microRNAs between estrogen receptor-positive and estrogen receptor-negative breast cancer.Genome Biol2009Cheng Cdoi: 10.1186/gb-2009-10-9-r90

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr135914197Missense_MutationNAQ586E0.74PAZ
BLCAchr135907058Missense_MutationnovelK507N0.18
BLCAchr135919157Nonsense_MutationnovelR790*0.08PAZ
BLCAchr135895179SilentnovelF310F0.58
BLCAchr135906984Missense_MutationnovelI483L0.44
BLCAchr135915525Missense_MutationnovelE671K0.48PAZ
BLCAchr135893711Missense_MutationnovelE184Q0.53
BLCAchr135901539Missense_MutationnovelM362I0.13
BLCAchr135906935Splice_RegionnovelK466K0.42
BLCAchr135888436Frame_Shift_InsnovelF21Lfs*320.16
BLCAchr135901998SilentNAI397I0.37
BRCAchr135907026Missense_MutationNAD497H0.23
BRCAchr135902003Missense_MutationNAV399A0.22
BRCAchr135906981Missense_MutationnovelP482S0.05
BRCAchr135892635SilentNAK96K0.51
BRCAchr135915439Missense_MutationNAY642C0.38PAZ
BRCAchr135901983SilentnovelI392I0.05
BRCAchr1359234573'UTRnovel0.21
BRCAchr135892610Missense_Mutationrs745615692R88H0.14
BRCAchr135907055SilentNAL506L0.25
BRCAchr135914197Missense_MutationNAQ586E0.16PAZ
BRCAchr135894381Missense_MutationNAR284H0.49
BRCAchr135919496Splice_Regionnovel0.13
BRCAchr135918398Missense_MutationnovelY747S0.07PAZ
CESCchr1359209813'UTRnovel0.11
CESCchr135893213SilentnovelQ149Q0.51
CESCchr1359204153'UTRnovel0.44
CESCchr135907032Missense_MutationNAV499M0.35
CESCchr1359218223'UTRnovel0.48
CESCchr135893706Missense_MutationnovelP182L0.23
CESCchr1359217433'UTRnovel0.29
CESCchr135919542Missense_MutationnovelP837S0.4
COADchr135919537Missense_MutationnovelR835Q0.23
COADchr135893182Missense_Mutationrs748561732R139Q0.42
COADchr135914221Missense_MutationNAA594T0.28PAZ
COADchr135893182Missense_Mutationrs748561732R139Q0.26
COADchr135892675Missense_MutationnovelR110W0.09
COADchr135907018Missense_MutationnovelQ494R0.12
COADchr135893741Missense_MutationNAR194C0.28
COADchr135919588Missense_MutationnovelR852H0.38
COADchr135915510Nonsense_MutationnovelR666*0.43PAZ
COADchr135895222Missense_MutationnovelC325R0.15
COADchr135894362Missense_MutationNAR278C0.34
COADchr135892672Missense_Mutationrs371043471E109K0.25
COADchr135901533Silentrs199616208S360S0.37
COADchr135915413SilentNAR633R0.33
COADchr135919588Missense_MutationnovelR852H0.23
ESCAchr1359205163'UTRrs5592886880.23
ESCAchr135913841Splice_SitenovelX528_splice0.29
ESCAchr1359221133'UTRrs5364621580.28
ESCAchr135917682SilentnovelQ706Q0.27
GBMchr135915516Missense_MutationnovelG668R0.18PAZ
GBMchr1358834075'UTRnovel0.21
GBMchr135893182Missense_Mutationrs748561732R139Q0.2
GBMchr1358833505'UTRnovel0.5
GBMchr135917718Missense_MutationnovelK718N0.07PAZ
GBMchr135915519Missense_MutationnovelV669M0.09PAZ
GBMchr135892606Missense_MutationnovelD87Y0.07
HNSCchr135913862Missense_MutationnovelD535N0.14PAZ
HNSCchr135907004SilentNAF489F0.36
HNSCchr135907011Missense_MutationNAY492D0.42
HNSCchr135917620Missense_MutationNAR686C0.13PAZ
HNSCchr135902307Missense_MutationnovelP456L0.26
HNSCchr135902308SilentnovelP456P0.26
HNSCchr135894139Missense_MutationnovelS251F0.28
HNSCchr135919158Missense_MutationnovelR790L0.32PAZ
HNSCchr135913946Missense_MutationnovelL563F0.35PAZ
KIRCchr135907082SilentNAL515L0.26
KIRPchr135888461SilentNAV20V0.29
KIRPchr135894387Missense_MutationNAP286L0.35
LAMLchr135892600Missense_MutationnovelF85I0.09
LGGchr135914253Frame_Shift_InsnovelP607Tfs*320.27PAZ
LGGchr135888430Missense_MutationnovelA10V0.48
LGGchr135892554Splice_Regionnovel0.54
LGGchr135902271Missense_MutationnovelI444T0.39
LIHCchr135918340Missense_MutationNAI728V0.43PAZ
LIHCchr135893732Missense_MutationnovelG191W0.38
LUADchr135893279Splice_SiteNAX171_splice0.13
LUADchr135883433SilentNAG4G0.17
LUADchr135893257Missense_MutationNAM164T0.1
LUADchr135915398SilentnovelR628R0.58
LUADchr135918323Missense_MutationNAI722T0.17PAZ
LUADchr135888444Frame_Shift_DelNAL17Cfs*990.36
LUADchr135901527Missense_MutationnovelQ358H0.51
LUADchr135915395Frame_Shift_DelnovelR628Gfs*1530.19PAZ
LUADchr135915396Missense_MutationnovelR628W0.19PAZ
LUADchr135919220Missense_MutationnovelA811S0.45PAZ
LUADchr135902230Missense_Mutationrs773266381Q430H0.23
LUADchr135915462Nonsense_MutationNAQ650*0.32PAZ
LUSCchr135917697SilentnovelT711T0.25
LUSCchr135893108Missense_MutationNAE114D0.38
LUSCchr135895179Missense_MutationnovelF310L0.29
LUSCchr135901994Missense_MutationnovelG396V0.16
LUSCchr135895244Frame_Shift_DelnovelK333Sfs*70.25
LUSCchr135906954Missense_MutationnovelR473W0.1
LUSCchr135902046SilentnovelA413A0.31
LUSCchr135895240Missense_Mutationrs759454083E331K0.19
MESOchr135913902Missense_MutationnovelK548T0.3PAZ
OVchr135919076Missense_MutationnovelY763H0.07PAZ
OVchr135901976Missense_Mutationrs758951181P390L0.35
OVchr135918381Frame_Shift_InsnovelF742Lfs*20.08PAZ
OVchr135902059Missense_MutationNAY418H0.12
OVchr135902268Missense_MutationNAG443V0.16
OVchr135918372SilentnovelI738I0.04
OVchr1359197093'UTRnovel0.23
PAADchr135893758SilentnovelG199G0.09
PRADchr135892638SilentnovelN97N0.32
PRADchr135902217Missense_MutationnovelA426V0.37
READchr135888551Silentrs200988923I50I0.2
READchr135893137Missense_MutationnovelR124L0.48
READchr135919601Silentrs764523718F856F0.42
SARCchr1359240563'UTRnovel0.29
SARCchr1359236863'UTRnovel0.28
SARCchr135906955Missense_Mutationrs761121371R473Q0.81
SARCchr1359201823'UTRnovel0.45
SKCMchr135919207SilentNAL806L0.34
SKCMchr135893217Missense_Mutationrs746713624P151S0.21
SKCMchr135902309Nonsense_MutationNAQ457*0.31
SKCMchr135901532Missense_MutationNAS360L0.3
SKCMchr135919064Nonsense_MutationNAR759*0.53PAZ
SKCMchr135919561Missense_MutationnovelA843V0.11
SKCMchr135914190Silentrs770625415A583A0.34
SKCMchr135913899Missense_MutationnovelV547G0.11PAZ
SKCMchr135915436Missense_MutationNAS641F0.24PAZ
SKCMchr1359196713'UTRnovel0.38
SKCMchr1359196723'UTRnovel0.27
SKCMchr135914261Missense_MutationNAP607H0.35PAZ
SKCMchr135919544SilentNAP837P0.68
SKCMchr135913960SilentNAV567V0.18
SKCMchr135893167Missense_MutationNAA134V0.54
SKCMchr135895210Missense_MutationNAP321S0.19
SKCMchr135893746SilentnovelE195E0.39
SKCMchr135917598Silentrs756047129L678L0.25
SKCMchr135907098Missense_MutationnovelP521S0.52PAZ
SKCMchr135907099Missense_MutationnovelP521L0.51PAZ
SKCMchr1358833665'UTRnovel0.33
SKCMchr135888542SilentNAI47I0.14
SKCMchr135895261Missense_MutationNAP338S0.53
SKCMchr135915372Missense_MutationNAP620S0.25PAZ
SKCMchr135895194SilentnovelN315N0.27
SKCMchr135895195Missense_MutationnovelL316F0.26
SKCMchr135894080SilentNAF231F0.4
STADchr135919065Missense_MutationNAR759Q0.45PAZ
STADchr135893755SilentNAF198F0.06
STADchr135915480Missense_MutationnovelR656S0.21PAZ
STADchr135893257Missense_MutationNAM164T0.27
STADchr135893741Missense_MutationNAR194C0.28
STADchr135902068Missense_MutationNAR421W0.19
STADchr135893741Missense_MutationNAR194C0.09
STADchr135888581Missense_MutationNAK60N0.21
STADchr135892609Missense_Mutationrs774432228R88C0.23
STADchr135917594Missense_MutationnovelI677K0.09PAZ
STADchr135914235Frame_Shift_DelnovelP600Qfs*140.09PAZ
STADchr135913853Missense_MutationNAR532C0.27PAZ
STADchr135902322Missense_MutationnovelR461Q0.43
STADchr135914272Missense_Mutationrs756692838A611T0.27PAZ
STADchr135917699Missense_MutationNAR712H0.19PAZ
STADchr135915447Missense_MutationNAR645C0.23PAZ
STADchr135919101Missense_Mutationrs371456175R771H0.3PAZ
STADchr135892670Missense_MutationNAN108S0.21
STADchr135902335Splice_RegionNAL465L0.25
STADchr135902303Missense_MutationNAA455T0.22
THCAchr135915431SilentNAD639D0.11
THYMchr1359196163'UTRrs7504834080.19
THYMchr1359235763'UTRnovel0.29
UCECchr135888444Frame_Shift_DelNAL17Cfs*990.46
UCECchr1359200583'UTRnovel0.25
UCECchr135888551Silentrs200988923I50I0.3
UCECchr135892610Missense_Mutationrs745615692R88H0.35
UCECchr135893137Missense_MutationnovelR124Q0.39
UCECchr135901589Missense_MutationnovelR379H0.38
UCECchr135902018Missense_MutationnovelT404M0.41
UCECchr135892672Missense_Mutationrs371043471E109K0.32
UCECchr135902305SilentNAA455A0.29
UCECchr1359211183'UTRnovel0.35
UCECchr1359215283'UTRnovel0.63
UCECchr135893730Frame_Shift_InsnovelG193Wfs*240.44
UCECchr1359238243'UTRnovel0.42
UCECchr1359202043'UTRnovel0.35
UCECchr135919131Missense_MutationNAT781M0.06PAZ
UCECchr135913860Missense_MutationnovelG534E0.43PAZ
UCECchr135919601Silentrs764523718F856F0.44
UCECchr1359202203'UTRnovel0.69
UCECchr1359208483'UTRnovel0.29
UCECchr135919064Nonsense_MutationNAR759*0.48PAZ
UCECchr135888552Missense_Mutationrs773153331D51N0.25
UCECchr135907058Missense_MutationnovelK507N0.05
UCECchr135915429Missense_MutationnovelD639Y0.1PAZ
UCECchr135917620Missense_MutationNAR686C0.3PAZ
UCECchr1359208963'UTRnovel0.63
UCECchr1359200593'UTRnovel0.42
UCECchr1359235083'UTRnovel0.35
UCECchr135919203Missense_MutationnovelR805H0.21PAZ
UCECchr135919554Missense_MutationnovelA841T0.14
UCECchr1359221233'UTRnovel0.06
UCECchr135888430Missense_MutationnovelA10V0.42
UCECchr1359199633'UTRnovel0.25
UCECchr1359203433'UTRnovel0.41
UCECchr1359202203'UTRnovel0.33
UCECchr135893099Splice_RegionnovelV111V0.07
UCECchr1359219523'UTRrs7743140690.39
UCECchr1359221433'UTRnovel0.37
UCECchr1359207113'UTRnovel0.13
UCECchr1359213903'UTRnovel0.32
UCECchr135894337SilentNAH269H0.51
UCECchr135893136Nonsense_MutationnovelR124*0.38
UCECchr135888455SilentnovelQ18Q0.64
UCECchr135888566Silentrs143228790Y55Y0.36
UCECchr1359204313'UTRnovel0.19
UCECchr1359208673'UTRnovel0.44
UCECchr1359222503'UTRnovel0.21
UCECchr135893731Frame_Shift_DelnovelG192Vfs*200.33
UCECchr135894333Missense_MutationnovelT268I0.38
UCECchr135917627Missense_MutationnovelA688V0.39PAZ
UCECchr1359242043'UTRnovel0.18
UCECchr135888527Nonsense_MutationnovelY42*0.35
UCECchr135893798Missense_MutationnovelL213F0.15
UCECchr135919601Silentrs764523718F856F0.18
UCECchr135892610Missense_Mutationrs745615692R88H0.41
UCECchr135893731Frame_Shift_DelnovelG192Vfs*200.5
UCECchr1359214193'UTRnovel0.4
UCECchr135888435Missense_MutationnovelA12T0.5
UCECchr135917620Missense_MutationNAR686C0.39PAZ
UCECchr1359214483'UTRnovel0.31
UCECchr1359200503'UTRnovel0.45
UCECchr1359220903'UTRnovel0.31
UCECchr1359219063'UTRnovel0.32
UCECchr1359235593'UTRnovel0.47
UCECchr1359238283'UTRnovel0.35
UCECchr135906973Missense_MutationNAA479V0.42
UCECchr135892599SilentNAI84I0.24
UCECchr1359219523'UTRrs7743140690.18
UCECchr135888609Missense_MutationnovelR70W0.35
UCECchr135901533Silentrs199616208S360S0.38
UCECchr1359219443'UTRnovel0.09
UCECchr135893731Frame_Shift_DelnovelG192Vfs*200.22
UCECchr135917620Missense_MutationNAR686C0.48PAZ
UCECchr135888598Missense_MutationnovelR66L0.11
UCECchr135901493In_Frame_InsnovelQ348dup0.2
UCECchr135902032Nonsense_MutationnovelR409*0.28
UCECchr135915383SilentnovelY623Y0.16
UCECchr135888444Frame_Shift_DelNAL17Cfs*990.46
UCECchr135902019Silentrs747545727T404T0.26
UCECchr135913870SilentnovelL537L0.29
UCECchr1359198513'UTRnovel0.42
UCECchr1359208393'UTRnovel0.38
UCECchr1359209453'UTRnovel0.37
UCECchr1359217393'UTRnovel0.24
UCECchr135902013SilentnovelD402D0.39
UCECchr1359209373'UTRnovel0.29

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
DLBCDEL0.08330.011841
TGCTDEL0.140.00046313

Survival Analysis
CancerP-value Q-value
ACC0.00011

Kaplan-Meier Survival Analysis

ESCA0.027

Kaplan-Meier Survival Analysis

READ0.0035

Kaplan-Meier Survival Analysis

KICH0.00061

Kaplan-Meier Survival Analysis

UCEC0.016

Kaplan-Meier Survival Analysis

LIHC0.0029

Kaplan-Meier Survival Analysis

LGG0.015

Kaplan-Meier Survival Analysis

LUAD0.0089

Kaplan-Meier Survival Analysis

UVM0.011

Kaplan-Meier Survival Analysis

Drugs

Select Dataset :


Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742


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