EuRBPDB

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  • Basic Information
  • Cancer Related Information

  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • GWAS
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000095627 (Gene tree)
Gene ID
56165
Gene Symbol
TDRD1
Alias
CT41.1
Full Name
tudor domain containing 1
Gene Type
protein_coding
Species
Homo_sapiens
Status
putative
Strand
Plus strand
Length
58,228 bases
Position
chr10:114,174,442-114,232,669
Accession
11712
RBP type
canonical RBP
Summary
This gene encodes a protein containing a tudor domain that is thought to function in the suppression of transposable elements during spermatogenesis. The related protein in mouse forms a complex with piRNAs and Piwi proteins to promote methylation and silencing of target sequences. This gene was observed to be upregulated by ETS transcription factor ERG in prostate tumors. [provided by RefSeq, Sep 2018]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000251864TUDORPF00567.246e-13114
ENSP00000251864TUDORPF00567.246e-13124
ENSP00000251864TUDORPF00567.246e-13134
ENSP00000251864TUDORPF00567.246e-13144
ENSP00000358286TUDORPF00567.241.4e-13014
ENSP00000358286TUDORPF00567.241.4e-13024
ENSP00000358286TUDORPF00567.241.4e-13034
ENSP00000358286TUDORPF00567.241.4e-13044
ENSP00000358288TUDORPF00567.241.5e-13014
ENSP00000358288TUDORPF00567.241.5e-13024
ENSP00000358288TUDORPF00567.241.5e-13034
ENSP00000358288TUDORPF00567.241.5e-13044
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000369280TDRD1-2024062XM_011539963ENSP000003582861104 (aa)XP_011538265H9KV62
ENST00000251864TDRD1-2014510XM_005269978ENSP000002518641189 (aa)XP_005270035Q9BXT4
ENST00000369282TDRD1-2033705XM_005269979ENSP000003582881113 (aa)XP_005270036H9KV63
Gene Model
Click here to download ENSG00000095627's gene model file
GWAS
ensgIDSNPChromosomePositionSNP-risk TraitPubmedID95% CIOr or BEAT EFO ID
ENSG00000095627rs1016017310114215306?Adolescent idiopathic scoliosis30019117EFO_0005423
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000095627's network

* RBP PPI network refers to all genes directly bind to RBP
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSG00000095627TDRD17035.263ENSG00000132972RNF179935.263
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000095627TDRD18834.839ENSAPOG00000023199tdrd19034.940Acanthochromis_polyacanthus
ENSG00000095627TDRD110086.957ENSAMEG00000015182TDRD19986.957Ailuropoda_melanoleuca
ENSG00000095627TDRD18734.708ENSACIG00000010576tdrd19034.708Amphilophus_citrinellus
ENSG00000095627TDRD18633.684ENSAOCG00000007059tdrd18933.780Amphiprion_ocellaris
ENSG00000095627TDRD18635.419ENSAPEG00000017049tdrd18835.419Amphiprion_percula
ENSG00000095627TDRD18635.070ENSATEG00000021627tdrd19133.703Anabas_testudineus
ENSG00000095627TDRD18767.568ENSAPLG00000012609TDRD19867.568Anas_platyrhynchos
ENSG00000095627TDRD19839.492ENSACAG00000009854TDRD19939.492Anolis_carolinensis
ENSG00000095627TDRD19992.453ENSANAG00000035710TDRD19992.453Aotus_nancymaae
ENSG00000095627TDRD18734.527ENSACLG00000014107tdrd18833.364Astatotilapia_calliptera
ENSG00000095627TDRD18435.360ENSAMXG00000015146tdrd18335.360Astyanax_mexicanus
ENSG00000095627TDRD110086.957ENSBTAG00000006855TDRD19986.957Bos_taurus
ENSG00000095627TDRD19895.556ENSCJAG00000019270TDRD19995.556Callithrix_jacchus
ENSG00000095627TDRD19986.957ENSCAFG00000011266TDRD110086.957Canis_familiaris
ENSG00000095627TDRD110086.957ENSCAFG00020012373TDRD110088.889Canis_lupus_dingo
ENSG00000095627TDRD19988.095ENSCHIG00000012766TDRD19988.095Capra_hircus
ENSG00000095627TDRD110090.698ENSTSYG00000004935TDRD19690.698Carlito_syrichta
ENSG00000095627TDRD19980.000ENSCPOG00000004190TDRD19980.000Cavia_porcellus
ENSG00000095627TDRD19997.778ENSCCAG00000027375TDRD110097.778Cebus_capucinus
ENSG00000095627TDRD110098.182ENSCATG00000035999TDRD110098.182Cercocebus_atys
ENSG00000095627TDRD110080.435ENSCLAG00000003935TDRD19880.435Chinchilla_lanigera
ENSG00000095627TDRD110097.778ENSCSAG00000005071TDRD19897.778Chlorocebus_sabaeus
ENSG00000095627TDRD19990.909ENSCHOG00000001690TDRD19390.909Choloepus_hoffmanni
ENSG00000095627TDRD19752.517ENSCPBG00000003780TDRD19952.517Chrysemys_picta_bellii
ENSG00000095627TDRD19994.617ENSCANG00000035172TDRD110094.617Colobus_angolensis_palliatus
ENSG00000095627TDRD19773.119ENSCGRG00001004632Tdrd110073.119Cricetulus_griseus_chok1gshd
ENSG00000095627TDRD19977.551ENSCGRG00000004981Tdrd19977.551Cricetulus_griseus_crigri
ENSG00000095627TDRD18434.156ENSCSEG00000006983tdrd19132.892Cynoglossus_semilaevis
ENSG00000095627TDRD18033.589ENSCVAG00000020980tdrd19233.589Cyprinodon_variegatus
ENSG00000095627TDRD18138.361ENSDARG00000007465tdrd18937.809Danio_rerio
ENSG00000095627TDRD19984.783ENSDNOG00000012114TDRD19884.783Dasypus_novemcinctus
ENSG00000095627TDRD19976.596ENSDORG00000009986Tdrd19976.596Dipodomys_ordii
ENSG00000095627TDRD18870.588ENSETEG00000020143TDRD18770.588Echinops_telfairi
ENSG00000095627TDRD110085.106ENSEASG00005014802TDRD110086.667Equus_asinus_asinus
ENSG00000095627TDRD110084.783ENSECAG00000009748TDRD19684.783Equus_caballus
ENSG00000095627TDRD110075.231ENSEEUG00000010076TDRD110075.231Erinaceus_europaeus
ENSG00000095627TDRD18633.366ENSELUG00000024364tdrd18833.366Esox_lucius
ENSG00000095627TDRD19986.667ENSFCAG00000000632TDRD19886.667Felis_catus
ENSG00000095627TDRD17661.538ENSFALG00000002237TDRD19161.538Ficedula_albicollis
ENSG00000095627TDRD19982.979ENSFDAG00000013225TDRD19982.979Fukomys_damarensis
ENSG00000095627TDRD18230.946ENSFHEG00000009203tdrd19130.649Fundulus_heteroclitus
ENSG00000095627TDRD17337.963ENSGMOG00000016797-6937.963Gadus_morhua
ENSG00000095627TDRD19144.667ENSGALG00000046180TDRD19944.667Gallus_gallus
ENSG00000095627TDRD18434.683ENSGAFG00000002668tdrd19234.303Gambusia_affinis
ENSG00000095627TDRD17936.054ENSGACG00000006590tdrd19936.054Gasterosteus_aculeatus
ENSG00000095627TDRD1100100.000ENSGGOG00000004250TDRD1100100.000Gorilla_gorilla
ENSG00000095627TDRD18534.420ENSHBUG00000005216tdrd18633.333Haplochromis_burtoni
ENSG00000095627TDRD19985.106ENSHGLG00000010877TDRD19885.106Heterocephalus_glaber_female
ENSG00000095627TDRD19577.113ENSHGLG00100013857TDRD19977.281Heterocephalus_glaber_male
ENSG00000095627TDRD18830.703ENSHCOG00000002840tdrd19130.826Hippocampus_comes
ENSG00000095627TDRD18235.814ENSIPUG00000017232tdrd19036.030Ictalurus_punctatus
ENSG00000095627TDRD110089.362ENSSTOG00000003221TDRD110091.111Ictidomys_tridecemlineatus
ENSG00000095627TDRD19875.554ENSJJAG00000014720Tdrd19975.809Jaculus_jaculus
ENSG00000095627TDRD18134.926ENSKMAG00000018558tdrd19634.926Kryptolebias_marmoratus
ENSG00000095627TDRD18735.135ENSLBEG00000004161tdrd18635.135Labrus_bergylta
ENSG00000095627TDRD19643.497ENSLACG00000011559TDRD110043.497Latimeria_chalumnae
ENSG00000095627TDRD18636.493ENSLOCG00000012030tdrd110038.255Lepisosteus_oculatus
ENSG00000095627TDRD17879.333ENSLAFG00000011575TDRD19979.333Loxodonta_africana
ENSG00000095627TDRD110098.182ENSMFAG00000043487TDRD110098.182Macaca_fascicularis
ENSG00000095627TDRD110098.182ENSMMUG00000022517TDRD110098.182Macaca_mulatta
ENSG00000095627TDRD110098.182ENSMNEG00000031108TDRD110098.182Macaca_nemestrina
ENSG00000095627TDRD110098.182ENSMLEG00000032281TDRD110098.182Mandrillus_leucophaeus
ENSG00000095627TDRD18534.241ENSMAMG00000015287tdrd19135.325Mastacembelus_armatus
ENSG00000095627TDRD18734.757ENSMZEG00005025315tdrd18933.577Maylandia_zebra
ENSG00000095627TDRD18756.410ENSMGAG00000011067TDRD19956.410Meleagris_gallopavo
ENSG00000095627TDRD19567.045ENSMAUG00000012164Tdrd19767.045Mesocricetus_auratus
ENSG00000095627TDRD110089.362ENSMICG00000016190TDRD19989.362Microcebus_murinus
ENSG00000095627TDRD19971.814ENSMOCG00000022360Tdrd19972.133Microtus_ochrogaster
ENSG00000095627TDRD18535.082ENSMMOG00000014068tdrd18835.353Mola_mola
ENSG00000095627TDRD19978.049ENSMODG00000009788TDRD19978.049Monodelphis_domestica
ENSG00000095627TDRD18734.692ENSMALG00000022115tdrd19035.312Monopterus_albus
ENSG00000095627TDRD19975.510MGP_CAROLIEiJ_G0023095Tdrd110075.510Mus_caroli
ENSG00000095627TDRD19971.429ENSMUSG00000025081Tdrd19971.806Mus_musculus
ENSG00000095627TDRD19872.658MGP_PahariEiJ_G0014583Tdrd19972.658Mus_pahari
ENSG00000095627TDRD19975.510MGP_SPRETEiJ_G0024016Tdrd110075.510Mus_spretus
ENSG00000095627TDRD110091.304ENSMPUG00000001987TDRD19991.304Mustela_putorius_furo
ENSG00000095627TDRD19978.723ENSNGAG00000015231Tdrd110078.723Nannospalax_galili
ENSG00000095627TDRD18233.696ENSNBRG00000017920tdrd18533.696Neolamprologus_brichardi
ENSG00000095627TDRD110094.545ENSNLEG00000016228TDRD110094.545Nomascus_leucogenys
ENSG00000095627TDRD19984.615ENSMEUG00000007717TDRD19984.615Notamacropus_eugenii
ENSG00000095627TDRD19980.435ENSOPRG00000009180TDRD19980.435Ochotona_princeps
ENSG00000095627TDRD19982.979ENSODEG00000011965TDRD19782.979Octodon_degus
ENSG00000095627TDRD18734.990ENSONIG00000016382tdrd18833.109Oreochromis_niloticus
ENSG00000095627TDRD19860.870ENSOANG00000001562TDRD19960.870Ornithorhynchus_anatinus
ENSG00000095627TDRD19882.979ENSOCUG00000025327TDRD19982.979Oryctolagus_cuniculus
ENSG00000095627TDRD18235.837ENSORLG00000004833tdrd18634.853Oryzias_latipes
ENSG00000095627TDRD18235.944ENSORLG00020019231tdrd19734.067Oryzias_latipes_hni
ENSG00000095627TDRD18235.845ENSORLG00015017184tdrd18534.858Oryzias_latipes_hsok
ENSG00000095627TDRD18136.022ENSOMEG00000023637tdrd18235.127Oryzias_melastigma
ENSG00000095627TDRD110089.362ENSOGAG00000001370TDRD110089.362Otolemur_garnettii
ENSG00000095627TDRD19981.633ENSOARG00000014200-9981.633Ovis_aries
ENSG00000095627TDRD1100100.000ENSPPAG00000041621TDRD1100100.000Pan_paniscus
ENSG00000095627TDRD19986.667ENSPPRG00000000191TDRD19886.667Panthera_pardus
ENSG00000095627TDRD110086.667ENSPTIG00000010264TDRD110086.364Panthera_tigris_altaica
ENSG00000095627TDRD1100100.000ENSPTRG00000002958TDRD1100100.000Pan_troglodytes
ENSG00000095627TDRD110098.182ENSPANG00000020752TDRD110098.182Papio_anubis
ENSG00000095627TDRD18435.693ENSPKIG00000010586tdrd19135.693Paramormyrops_kingsleyae
ENSG00000095627TDRD19966.667ENSPSIG00000014655TDRD19966.667Pelodiscus_sinensis
ENSG00000095627TDRD18132.327ENSPMGG00000018890tdrd110032.120Periophthalmus_magnuspinnatus
ENSG00000095627TDRD19976.087ENSPEMG00000004582Tdrd19976.087Peromyscus_maniculatus_bairdii
ENSG00000095627TDRD17230.833ENSPMAG00000004416-9930.833Petromyzon_marinus
ENSG00000095627TDRD19978.571ENSPCIG00000009739TDRD19978.571Phascolarctos_cinereus
ENSG00000095627TDRD17934.739ENSPFOG00000002145tdrd18933.951Poecilia_formosa
ENSG00000095627TDRD18734.043ENSPLAG00000010241tdrd18933.270Poecilia_latipinna
ENSG00000095627TDRD18734.277ENSPMEG00000021893tdrd18734.277Poecilia_mexicana
ENSG00000095627TDRD18733.871ENSPREG00000022663tdrd19133.871Poecilia_reticulata
ENSG00000095627TDRD1100100.000ENSPPYG00000002671TDRD199100.000Pongo_abelii
ENSG00000095627TDRD19671.813ENSPCAG00000006692TDRD19767.795Procavia_capensis
ENSG00000095627TDRD19989.130ENSPCOG00000026619TDRD19987.273Propithecus_coquereli
ENSG00000095627TDRD19978.040ENSPVAG00000003055TDRD19978.867Pteropus_vampyrus
ENSG00000095627TDRD18233.465ENSPNYG00000001706tdrd18433.465Pundamilia_nyererei
ENSG00000095627TDRD18138.362ENSPNAG00000005831tdrd19435.936Pygocentrus_nattereri
ENSG00000095627TDRD19975.510ENSRNOG00000017064Tdrd19975.510Rattus_norvegicus
ENSG00000095627TDRD110091.855ENSRBIG00000029668TDRD19894.811Rhinopithecus_bieti
ENSG00000095627TDRD110094.958ENSRROG00000043379TDRD110094.958Rhinopithecus_roxellana
ENSG00000095627TDRD19992.453ENSSBOG00000023561TDRD19992.453Saimiri_boliviensis_boliviensis
ENSG00000095627TDRD19982.927ENSSHAG00000014311TDRD19982.927Sarcophilus_harrisii
ENSG00000095627TDRD18136.454ENSSFOG00015022020tdrd19135.900Scleropages_formosus
ENSG00000095627TDRD18235.244ENSSMAG00000019271tdrd18834.638Scophthalmus_maximus
ENSG00000095627TDRD18234.627ENSSDUG00000022012tdrd18933.664Seriola_dumerili
ENSG00000095627TDRD18234.177ENSSLDG00000006423tdrd18933.234Seriola_lalandi_dorsalis
ENSG00000095627TDRD19982.609ENSSARG00000008828TDRD18382.609Sorex_araneus
ENSG00000095627TDRD19249.182ENSSPUG00000005015TDRD19949.182Sphenodon_punctatus
ENSG00000095627TDRD18633.702ENSSPAG00000018805tdrd18932.574Stegastes_partitus
ENSG00000095627TDRD19985.714ENSSSCG00000021075TDRD19985.714Sus_scrofa
ENSG00000095627TDRD17558.974ENSTGUG00000010905TDRD19858.974Taeniopygia_guttata
ENSG00000095627TDRD18234.747ENSTRUG00000012142tdrd19934.120Takifugu_rubripes
ENSG00000095627TDRD18046.377ENSTNIG00000018898tdrd110034.988Tetraodon_nigroviridis
ENSG00000095627TDRD17686.957ENSTBEG00000014978-5586.957Tupaia_belangeri
ENSG00000095627TDRD110089.130ENSTBEG00000014417-9989.130Tupaia_belangeri
ENSG00000095627TDRD110084.783ENSTTRG00000010147TDRD19885.417Tursiops_truncatus
ENSG00000095627TDRD110091.304ENSUAMG00000009025TDRD110091.111Ursus_americanus
ENSG00000095627TDRD110091.304ENSUMAG00000000705TDRD110091.111Ursus_maritimus
ENSG00000095627TDRD110089.130ENSVPAG00000004000TDRD19889.130Vicugna_pacos
ENSG00000095627TDRD110089.130ENSVVUG00000009750TDRD110089.130Vulpes_vulpes
ENSG00000095627TDRD17136.100ENSXCOG00000006412tdrd19736.100Xiphophorus_couchianus
ENSG00000095627TDRD18434.881ENSXMAG00000008104tdrd19734.213Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005737cytoplasm-ISSComponent
GO:0007275multicellular organism development-IEAProcess
GO:0007281germ cell development-ISSProcess
GO:0007283spermatogenesis-ISSProcess
GO:0031047gene silencing by RNA-ISSProcess
GO:0033391chromatoid body-IEAComponent
GO:0034587piRNA metabolic process-ISSProcess
GO:0043046DNA methylation involved in gamete generation-ISSProcess
GO:0043186P granule-ISSComponent
GO:0046872metal ion binding-IEAFunction
GO:0051321meiotic cell cycle-IEAProcess
GO:0071546pi-body-ISSComponent

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
23319146Identification of TDRD1 as a direct target gene of ERG in primary prostate cancer.Int J Cancer2013 Jul 15Boormans JLdoi: 10.1002/ijc.28025
23555854ERG induces epigenetic activation of Tudor domain-containing protein 1 (TDRD1) in ERG rearrangement-positive prostate cancer.PLoS One2013Kacprzyk LAdoi: 10.1371/journal.pone.0059976

Differential Expression

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
BLCAchr10114221428Missense_Mutationrs765732209E948K0.14TUDOR
BLCAchr10114203427Missense_Mutationrs138005760V281M0.42
BLCAchr10114220652Missense_MutationnovelR860T0.28
BLCAchr10114226132Missense_MutationNAE1031K0.28TUDOR
BLCAchr10114188107SilentNAI92I0.18
BLCAchr10114210702SilentnovelH502H0.1
BLCAchr10114204835SilentnovelV413V0.29
BLCAchr10114210966Splice_RegionnovelS553S0.39
BLCAchr10114203099Missense_MutationnovelE242K0.35
BLCAchr10114218560Nonsense_MutationNAQ824*0.2
BLCAchr10114202251Missense_MutationNAE217K0.28
BLCAchr101141878315'UTRnovel0.16
BLCAchr10114203128Missense_Mutationrs770791214M251I0.24
BRCAchr10114214079Missense_MutationnovelP726L0.03
BRCAchr10114221363Missense_MutationNAS926C0.2
BRCAchr10114203440Missense_MutationnovelS285F0.06
BRCAchr10114214098SilentNAH732H0.33
BRCAchr10114220595Missense_MutationnovelS841Y0.35
BRCAchr10114227160SilentNAV1088V0.35
BRCAchr10114227099Missense_MutationNAS1068C0.33
BRCAchr10114204738Missense_MutationNAV381A0.27
BRCAchr10114220577Missense_MutationnovelS835C0.19
BRCAchr10114213525Missense_MutationnovelG671C0.06
BRCAchr10114228166Intronnovel0.28
BRCAchr10114210726Missense_MutationNAF510L0.11
BRCAchr10114218432Missense_MutationNAR781H0.11
BRCAchr10114220754Missense_MutationnovelV894A0.07
BRCAchr10114214097Nonsense_MutationnovelV733*0.04
CESCchr10114228035Splice_Regionrs7458462900.36
CESCchr10114214039Missense_MutationNAD713N0.42
CESCchr10114211966SilentnovelL587L0.22
CESCchr10114187876Frame_Shift_DelnovelE16Kfs*70.41
CESCchr10114187877Missense_MutationNAE16K0.41
CESCchr10114199172Splice_SitenovelX129_splice0.1
CESCchr10114187988Missense_MutationnovelF53V0.37
CESCchr10114199309Missense_MutationnovelG174D0.29
CESCchr10114210749Splice_SitenovelX518_splice0.4
CESCchr10114214116Splice_SiteNAX738_splice0.45
CESCchr101142315463'UTRnovel0.24
CESCchr10114227233Missense_MutationNAD1113H0.19
CESCchr10114213492Missense_MutationNAH660D0.16
CESCchr10114204173Missense_MutationnovelR361T0.13
CESCchr10114187916Missense_MutationNAE29Q0.11
CESCchr10114213516Missense_MutationNAL668I0.55
COADchr10114188030Missense_MutationnovelF67V0.27
COADchr10114204085Missense_MutationnovelA332S0.27
COADchr10114187851Missense_MutationnovelF7C0.1
COADchr10114213444SilentnovelL644L0.17
COADchr10114217615Missense_MutationnovelF761L0.29
COADchr10114227217SilentnovelG1107G0.05
COADchr10114202273Missense_MutationnovelT224I0.07
COADchr10114199204Frame_Shift_InsNAL142Tfs*130.26
COADchr10114227121Missense_MutationnovelL1075F0.5
COADchr10114228177Intronnovel0.07
COADchr10114202292SilentnovelN230N0.22
COADchr10114190979Missense_MutationnovelP115Q0.23
COADchr10114203178Splice_SitenovelX267_splice0.09
COADchr10114213579Nonsense_MutationNAE689*0.17
COADchr10114214084Missense_MutationNAE728K0.27
COADchr10114218494In_Frame_InsnovelN802delinsTFPFYRH0.05
ESCAchr10114227121Frame_Shift_DelnovelN1077Ifs*40.4
ESCAchr10114227129Missense_MutationnovelF1078C0.35
ESCAchr10114221410Missense_Mutationrs376481564I942V0.3TUDOR
ESCAchr10114204128Missense_MutationnovelV346A0.45
GBMchr10114213524SilentnovelA670A0.1
GBMchr10114220743Missense_MutationnovelD890E0.31
GBMchr10114204881Missense_MutationnovelL429M0.15
GBMchr10114210607Missense_MutationnovelT471A0.37
GBMchr10114211917Missense_MutationnovelS571Y0.17
GBMchr10114213375Missense_MutationnovelP621S0.43
GBMchr10114228038Missense_Mutationrs766881742V1151I0.23
GBMchr10114228152Intronrs7595919140.21
GBMchr10114201432Nonsense_MutationnovelC184*0.06
GBMchr10114213508Missense_MutationnovelK665I0.31
GBMchr10114203460Missense_MutationnovelM292L0.1
GBMchr10114218484SilentnovelV798V0.2
GBMchr10114227144Missense_MutationnovelN1083I0.05
HNSCchr10114210714SilentnovelP506P0.46
HNSCchr10114187987SilentnovelN52N0.12
HNSCchr10114227283Missense_MutationnovelQ1129H0.21
HNSCchr10114213371Nonsense_MutationnovelW619*0.33
HNSCchr10114202286SilentnovelE228E0.32
HNSCchr10114214001Missense_MutationnovelV700A0.24
HNSCchr10114211928Missense_MutationnovelG575R0.29
HNSCchr10114210922Missense_MutationnovelD539N0.24
HNSCchr10114226151Missense_MutationnovelR1037K0.21TUDOR
HNSCchr10114218485Missense_MutationnovelD799Y0.21
HNSCchr10114220620SilentnovelQ849Q0.05
HNSCchr10114218499Silentrs748563814I803I0.16
HNSCchr10114226114Missense_MutationnovelA1025P0.15TUDOR
KIRCchr10114213344Splice_SiteNAX611_splice0.14
KIRPchr10114188045Nonsense_MutationnovelQ72*0.46
KIRPchr10114204852Missense_MutationnovelE419V0.39
KIRPchr10114218472Missense_MutationNAK794N0.07
KIRPchr10114187871In_Frame_DelnovelN14_L15del0.43
LAMLchr10114201421Missense_MutationnovelC181R0.37
LAMLchr10114227279Missense_MutationnovelR1128T0.23
LGGchr10114202284Missense_MutationnovelE228K0.39
LGGchr10114204781SilentnovelC395C0.71
LIHCchr10114228335Intronnovel0.4
LIHCchr10114227240Missense_MutationNAL1115R0.33
LIHCchr10114217650Splice_SitenovelX775_splice0.13
LIHCchr10114206281Nonsense_MutationnovelY445*0.72
LIHCchr10114226178Missense_MutationNAL1046P0.38TUDOR
LIHCchr10114188048Missense_MutationNAT73S0.85
LIHCchr10114227916Missense_MutationNAM1137T0.24
LIHCchr10114199270Missense_MutationNAL161S0.53
LUADchr10114226067Missense_MutationnovelR1009H0.07TUDOR
LUADchr10114210881Missense_Mutationrs753980626A525E0.38
LUADchr10114203427Missense_MutationnovelV281L0.18
LUADchr10114203567Splice_RegionnovelQ327Q0.3
LUADchr10114210877Nonsense_MutationNAQ524*0.18
LUADchr10114217628Missense_MutationNAG766R0.29
LUADchr10114211878Nonsense_MutationNAW558*0.13
LUADchr10114213446Missense_MutationnovelL644F0.17
LUADchr10114227156Missense_MutationNAS1087F0.36
LUADchr10114227921Missense_MutationNAR1139G0.11
LUADchr10114213485Missense_MutationNAE657D0.39
LUADchr10114222681Silentrs767859168D995D0.22
LUADchr10114204199Missense_MutationnovelD370Y0.4
LUADchr10114222671Missense_MutationnovelR992T0.21TUDOR
LUADchr10114190987Missense_MutationNAE118K0.36
LUADchr10114213425SilentnovelT637T0.18
LUADchr10114204109Nonsense_MutationnovelQ340*0.14
LUSCchr10114218555Missense_MutationNAP822L0.18
LUSCchr10114218501Missense_MutationnovelE804G0.09
LUSCchr10114221463Silentrs144170696P959P0.12
LUSCchr10114201481Missense_MutationNAA201S0.08
LUSCchr10114227199Missense_MutationNAE1101D0.26
LUSCchr10114227287Missense_MutationnovelA1131S0.4
LUSCchr10114210679Missense_MutationnovelE495K0.14
LUSCchr10114214022Missense_MutationNAW707L0.38
LUSCchr10114211991Nonsense_MutationnovelK596*0.34
LUSCchr10114188132Missense_MutationNAG101R0.48
LUSCchr10114188134SilentNAG101G0.47
LUSCchr10114204762Missense_MutationnovelG389E0.15
LUSCchr10114210951SilentNAC548C0.16
LUSCchr10114202251Missense_MutationnovelE217Q0.07
LUSCchr101142315463'UTRnovel0.44
LUSCchr10114203404Missense_MutationNAF273C0.31
LUSCchr10114220620Missense_MutationNAQ849H0.2
MESOchr101142316283'UTRrs5760309520.6
OVchr10114202273Missense_MutationnovelT224I0.08
OVchr10114199226SilentNAV146V0.31
OVchr10114227249Missense_MutationnovelF1118Y0.27
OVchr10114221385SilentnovelT933T0.06
OVchr10114227249Frame_Shift_InsnovelF1118Lfs*220.17
OVchr10114218569Missense_MutationNAR827W0.4
OVchr10114203095SilentnovelT240T0.15
OVchr10114202273Missense_MutationnovelT224I0.17
OVchr10114220844Splice_SiteNAX924_splice0.41
OVchr10114188018Missense_MutationnovelK63E0.04
OVchr10114220648Missense_MutationNAA859P0.78
PAADchr10114210922Missense_MutationnovelD539Y0.26
PAADchr10114226137SilentnovelT1032T0.2
PRADchr10114211931Missense_MutationNAY576H0.07
PRADchr10114222681Silentrs767859168D995D0.41
READchr10114228142Intronnovel0.18
READchr10114226181Missense_Mutationrs576653939A1047V0.35TUDOR
READchr10114188146Frame_Shift_InsnovelP107Afs*120.14
READchr10114203162Missense_MutationnovelT263A0.2
READchr10114203487Nonsense_MutationnovelE301*0.44
READchr10114228152Intronrs7595919140.5
READchr10114217552Missense_MutationNAK740N0.46
READchr10114220825Missense_MutationNAH918N0.32
SARCchr10114204836Missense_MutationnovelD414N0.45
SARCchr10114203090Missense_MutationnovelV239I0.39
SKCMchr10114203508Missense_MutationNAE308K0.97
SKCMchr10114203167Missense_MutationNAM264I0.2
SKCMchr10114213995Missense_MutationNAG698E0.35
SKCMchr10114211958Missense_MutationNAL585F0.29
SKCMchr10114226186Missense_MutationNAP1049S0.24TUDOR
SKCMchr10114220695Silentrs748452799T874T0.28
SKCMchr10114228038Missense_MutationnovelV1151F0.11
SKCMchr10114213537Missense_MutationnovelG675R0.42
SKCMchr10114231494Missense_MutationnovelS1183A0.48
SKCMchr10114206315Missense_MutationNAE457K0.37
SKCMchr10114188006Missense_MutationNAE59K0.31
SKCMchr10114210884Missense_MutationnovelS526F0.42
SKCMchr10114218524Nonsense_MutationNAR812*0.28
SKCMchr10114204173Missense_MutationNAR361K0.23
SKCMchr10114213370Nonsense_MutationNAW619*0.17
SKCMchr10114227079Missense_MutationNAM1061I0.23
SKCMchr10114221385Silentrs199767512T933T0.49
SKCMchr10114210935Missense_MutationNAA543V0.97
SKCMchr10114188132Missense_MutationNAG101R0.37
SKCMchr10114218446Missense_MutationnovelE786K0.51
SKCMchr10114211957SilentNAI584I0.33
SKCMchr10114188132Missense_MutationNAG101R0.22
SKCMchr10114210943Missense_MutationNAD546N0.09
SKCMchr10114199302Missense_MutationnovelR172C0.29
SKCMchr10114222676Missense_MutationnovelG994R0.33TUDOR
SKCMchr10114214007Missense_MutationNAP702L0.69
SKCMchr10114202251Missense_MutationNAE217K0.43
SKCMchr10114213457Missense_Mutationrs780473726S648F0.45
SKCMchr10114227121Frame_Shift_DelnovelN1077Ifs*40.5
SKCMchr10114211957SilentNAI584I0.23
SKCMchr10114199234Missense_MutationNAS149F0.29
SKCMchr10114226144Missense_Mutationrs141065182L1035F0.29TUDOR
SKCMchr10114210650Missense_MutationNAP485L0.83
SKCMchr101142315853'UTRnovel0.29
SKCMchr10114203535Missense_MutationNAE317K0.22
SKCMchr10114204760SilentNAE388E0.58
SKCMchr10114188140SilentNAR103R0.27
SKCMchr10114228084Missense_MutationNAT1166I0.8
SKCMchr10114213364Missense_MutationNAG617E0.69
SKCMchr10114187985Missense_MutationNAN52D0.06
SKCMchr10114226186Missense_MutationNAP1049S0.34TUDOR
SKCMchr10114211944Missense_Mutationrs267602371G580E0.68
SKCMchr10114201413Missense_MutationNAS178L0.22
SKCMchr10114213395Missense_MutationnovelM627I0.3
SKCMchr10114204173Missense_MutationNAR361K0.52
SKCMchr10114210884Missense_MutationnovelS526F0.6
SKCMchr10114226066Missense_MutationNAR1009C0.17TUDOR
SKCMchr10114218431Missense_MutationnovelR781C0.26
SKCMchr10114220696Missense_Mutationrs770914554D875N0.56
STADchr10114217551Missense_MutationnovelK740T0.15
STADchr10114227121Frame_Shift_DelnovelN1077Ifs*40.22
STADchr10114210747Splice_RegionNAG517G0.13
STADchr10114202277Silentrs776710570K225K0.39
STADchr10114212016Missense_MutationnovelA604V0.1
STADchr10114211968Missense_MutationNAM588T0.31
STADchr10114203552Missense_MutationNAK322N0.05
STADchr10114221399Missense_MutationNAV938A0.25TUDOR
STADchr10114199276Missense_MutationNAP163L0.22
STADchr10114199295SilentNAT169T0.29
STADchr10114206275Missense_MutationNAM443I0.08
STADchr10114227259Frame_Shift_DelNAN1123Tfs*100.27
STADchr10114228110Frame_Shift_DelnovelK1176Nfs*30.29
STADchr10114210924Frame_Shift_DelnovelY541Ifs*370.36
STADchr10114213406Missense_MutationNAV631A0.25
STADchr10114210922Missense_MutationnovelD539Y0.81
STADchr10114188140Frame_Shift_InsnovelL106Ifs*130.35
STADchr10114220823Missense_MutationNAV917A0.22
UCECchr10114210963SilentNAF552F0.36
UCECchr10114227211Missense_MutationNAE1105D0.34
UCECchr101142315503'UTRnovel0.35
UCECchr101142315673'UTRnovel0.29
UCECchr10114227219Missense_MutationnovelT1108I0.26
UCECchr101142315593'UTRnovel0.17
UCECchr10114187866Missense_MutationNAR12I0.36
UCECchr10114217624Missense_Mutationrs750552691E764D0.37
UCECchr10114221389Nonsense_MutationNAE935*0.45
UCECchr10114213589Splice_SitenovelX692_splice0.55
UCECchr10114220604Missense_MutationnovelA844V0.35
UCECchr10114221384Missense_Mutationrs755901940T933M0.26
UCECchr101142315883'UTRnovel0.2
UCECchr10114217552Missense_MutationNAK740N0.34
UCECchr10114218500Missense_MutationnovelE804K0.51
UCECchr10114228035Splice_Regionrs7458462900.38
UCECchr10114218500Missense_MutationnovelE804K0.38
UCECchr10114211975SilentnovelL590L0.37
UCECchr10114213352Missense_MutationnovelK613M0.37
UCECchr10114220766Missense_MutationNAA898V0.43
UCECchr10114203418Missense_MutationnovelD278Y0.5
UCECchr10114202261Nonsense_MutationNAS220*0.44
UCECchr10114220696Missense_Mutationrs770914554D875N0.32
UCECchr10114212023SilentNAK606K0.25
UCECchr10114220766Missense_MutationNAA898V0.22
UCECchr10114227244SilentNAV1116V0.1
UCECchr10114210607In_Frame_InsnovelI476_V477insYHQWLDKNQSVEATENNI0.02
UCECchr10114202276Missense_MutationNAK225T0.48
UCECchr10114203426Silentrs145466216Y280Y0.23
UCECchr10114213482SilentNAS656S0.18
UCECchr10114213553Missense_MutationNAV680A0.2
UCECchr10114190999Missense_MutationnovelP122S0.04
UCECchr10114199192Missense_Mutationrs149031282R135H0.21
UCECchr10114203076Missense_MutationnovelD234G0.18
UCECchr10114204724Splice_RegionnovelA376A0.15
UCECchr10114213388Missense_MutationnovelC625Y0.18
UCECchr10114187846Silentrs138882204S5S0.37
UCECchr10114228152Intronrs7595919140.31
UCECchr10114187868Missense_MutationNAN13H0.39
UCECchr10114211978SilentnovelC591C0.19
UCECchr10114210628Missense_MutationNAV478I0.53
UCECchr10114214034Missense_Mutationrs774487353G711D0.13
UCECchr10114203162Missense_MutationnovelT263A0.38
UCECchr101142315753'UTRnovel0.41
UCECchr10114199234Missense_MutationNAS149F0.3
UCECchr10114204887Missense_MutationnovelN431H0.38
UCECchr10114214084Nonsense_MutationnovelE728*0.53
UCECchr10114217552Missense_MutationNAK740N0.38
UCECchr10114227120Missense_MutationnovelL1075S0.43
UCECchr10114188108Missense_MutationnovelN93D0.15
UCECchr10114214024Missense_MutationnovelV708I0.4
UCECchr10114218465Missense_Mutationrs377385869H792R0.26
UCECchr10114221384Missense_Mutationrs755901940T933M0.33
UCECchr10114204836Missense_MutationnovelD414N0.36
UCECchr10114188044SilentnovelE71E0.34
UCECchr10114218432Missense_MutationNAR781H0.33
UCECchr10114228232Intronnovel0.42
UCECchr10114203552Missense_MutationnovelK322N0.45
UCECchr10114204836Missense_MutationnovelD414N0.45
UCECchr10114206317SilentnovelE457E0.47
UCECchr10114214095SilentnovelC731C0.48
UCECchr10114213513Missense_MutationnovelL667I0.09
UCECchr10114221394SilentnovelL936L0.44
UCECchr10114228195Intronnovel0.31
UCECchr10114188008Missense_Mutationrs781068186E59D0.45
UCECchr10114214088Missense_MutationnovelF729C0.26
UCECchr10114218453Missense_MutationnovelL788S0.39
UCECchr10114226181Missense_Mutationrs576653939A1047V0.22TUDOR
UCECchr10114206321In_Frame_InsnovelA459delinsGQRRRT0.09
UCECchr10114213579Nonsense_MutationNAE689*0.2
UCECchr10114210910Missense_MutationnovelP535S0.18
UCECchr10114210911Frame_Shift_InsnovelP536Ffs*430.15
UCECchr10114206321In_Frame_InsnovelA459delinsGQRRRT0.1
UCECchr10114204157Missense_MutationnovelI356L0.37
UCECchr10114222681Silentrs767859168D995D0.12
UCECchr10114188038SilentnovelL69L0.52
UCECchr10114210684Missense_MutationnovelF496L0.43
UCECchr10114228087Missense_MutationnovelN1167T0.4
UCECchr10114206321Frame_Shift_InsnovelA459Gfs*130.06
UCECchr10114206322Frame_Shift_InsnovelD460Efs*140.06
UCECchr10114211946Missense_MutationnovelN581Y0.05
UCECchr10114217552Missense_MutationNAK740N0.09
UCECchr10114210628Missense_MutationNAV478I0.46
UCECchr10114202284Missense_MutationnovelE228K0.08
UCECchr10114213482Silentrs368173748S656S0.28
UCECchr10114226182Silentrs748715176A1047A0.44
UCECchr10114228037Splice_SitenovelX1151_splice0.4
UCECchr10114199177Missense_MutationNAP130L0.36
UCECchr10114203392Missense_Mutationrs369155631T269M0.28
UCECchr10114201492SilentNAI204I0.39
UCECchr10114199205Frame_Shift_DelNAK141Nfs*20.26
UCECchr10114227258Frame_Shift_InsNAN1123Kfs*170.31
UCECchr10114228042Frame_Shift_DelnovelK1153Nfs*100.52
UCECchr10114204173Missense_MutationNAR361I0.23
UCECchr10114204872Nonsense_MutationNAE426*0.37
UCECchr10114187845Missense_Mutationrs146228512S5L0.4
UCECchr10114211884Missense_MutationnovelR560H0.2
UCECchr10114222682Missense_Mutationrs199536592A996T0.19TUDOR
UCECchr101142316043'UTRnovel0.18
UCECchr10114226104Missense_MutationnovelE1021D0.14TUDOR
UCECchr10114187903SilentnovelE24E0.08
UCECchr10114206264Missense_MutationNAL440F0.28
UCECchr10114213487Missense_Mutationrs371770651T658M0.27
UCECchr10114211884Missense_MutationnovelR560H0.38
UCECchr10114204895Splice_SitenovelX433_splice0.39
UCECchr10114213395Frame_Shift_InsnovelL630Tfs*250.34
UCECchr10114226067Missense_MutationnovelR1009H0.37TUDOR
UCECchr10114201410Missense_MutationNAG177E0.43
UCECchr10114210703Missense_MutationnovelI503V0.39
UCSchr10114221401Missense_MutationnovelD939Y0.45TUDOR

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCDEL0.10.19593
CHOLDEL0.27780.048655
COADDEL0.15969.4741e-07
LIHCDEL0.25145.7505e-06
MESODEL0.27590.00015289
OVDEL0.31785.3759e-12
PAADDEL0.11410.169
READDEL0.21210.014135
THYMDEL0.03250.10563
UCSDEL0.28570.1218

Survival Analysis
CancerP-value Q-value
KIRC0.019

Kaplan-Meier Survival Analysis

HNSC0.012

Kaplan-Meier Survival Analysis

KIRP0.016

Kaplan-Meier Survival Analysis

GBM0.026

Kaplan-Meier Survival Analysis

LIHC0.0085

Kaplan-Meier Survival Analysis

CHOL0.018

Kaplan-Meier Survival Analysis

LUAD0.0038

Kaplan-Meier Survival Analysis

Drugs

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Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742


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