EuRBPDB

Description

RBDs

RBPome

Literatures

Expression

Transcripts

Gene Model

Phenotypes

GWAS

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSG00000100220 (Gene tree)
Gene ID: 51493
Gene Symbol: RTCB
Alias: HSPC117|FAAP|C22orf28
Full Name: RNA 2',3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Minus strand
Length: 24,713 bases
Position: chr22:32,387,575-32,412,287
Accession: 26935
RBP type: canonical RBP
Summary: (RNA 2',3'-Cyclic Phosphate And 5'-OH Ligase) is a Protein Coding gene. Among its related pathways are Gene Expression and tRNA processing. Gene Ontology (GO) annotations related to this gene include RNA ligase (ATP) activity.

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSP00000216038	RtcB	PF01139.17	2.5e-145	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
22681889	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts	4SURIC & HEK293	2012 May	Baltz AG	DOI: 10.1016/j.molcel.2012.05.021
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & HEK293	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
29431736	Capturing the interactome of newly transcribed RNA	PolyT-RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RIC & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
29431736	Capturing the interactome of newly transcribed RNA	RICK & Hela	2018 Feb 12	Bao X	DOI: 10.1038/nmeth.4595
22658674	Insights into RNA biology from an atlas of mammalian mRNA-binding proteins	RIC & Hela	2012 May 31	Castello A	DOI: 10.1016/j.cell.2012.04.031
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & MCF10A	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30607034	Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)	OOPS & U2OS	2019 Jan 3	Queiroz RML	DOI: 10.1038/s41587-018-0001-2
27453046	Comprehensive Identification of RNA-Binding Domains in Human Cells	RIC & Hela	2016 Aug 18	Castello A	DOI: 10.1016/j.molcel.2016.06.029
30352994	Discovery of RNA-binding proteins and characterization of their dynamic responses by enhanced RNA interactome capture	RIC & Jurkat	2018 Oct 23	Perez-Perri JI	DOI:10.1038/s41467-018-06557-8

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
15312650	Kinesin transports RNA: isolation and characterization of an RNA-transporting granule.	Neuron	2004 Aug 19	Kanai Y	-
22949672	Structural and mechanistic insights into guanylylation of RNA-splicing ligase RtcB joining RNA between 3'-terminal phosphate and 5'-OH.	Proc Natl Acad Sci U S A	2012 Sep 18	Englert M	-

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000476619	RTCB-203	594	-	-	- (aa)	-	-
ENST00000498434	RTCB-206	536	-	-	- (aa)	-	-
ENST00000216038	RTCB-201	2027	-	ENSP00000216038	505 (aa)	-	Q9Y3I0
ENST00000485373	RTCB-204	564	-	-	- (aa)	-	-
ENST00000487704	RTCB-205	767	-	-	- (aa)	-	-
ENST00000463455	RTCB-202	628	-	-	- (aa)	-	-

Gene Model

Click here to download ENSG00000100220's gene model file

Phenotypes

ensgID	Trait	pValue	Pubmed ID
ENSG00000100220	Immunoglobulins	3E-6	23382691

GWAS

ensgID	SNP	Chromosome	Position	SNP-risk	Trait	PubmedID	95% CI	Or or BEAT	EFO ID
ENSG00000100220	rs12530	22	32387917	C	IgG glycosylation	23382691	[0.11-0.26] unit increase	0.1828	EFO_0005193
ENSG00000100220	rs9680823	22	32394994	?	Adolescent idiopathic scoliosis	30019117			EFO_0005423

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000100220's network

* RBP PPI network refers to all genes directly bind to RBP

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSG00000100220	RTCB	100	94.653	ENSAPOG00000006040	rtcb	100	94.653	Acanthochromis_polyacanthus
ENSG00000100220	RTCB	100	99.802	ENSAMEG00000016152	RTCB	100	99.802	Ailuropoda_melanoleuca
ENSG00000100220	RTCB	100	90.297	ENSACIG00000009083	rtcb	100	90.297	Amphilophus_citrinellus
ENSG00000100220	RTCB	100	94.851	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSG00000100220	RTCB	100	94.851	ENSAPEG00000024701	rtcb	100	94.851	Amphiprion_percula
ENSG00000100220	RTCB	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSG00000100220	RTCB	100	94.455	ENSATEG00000000618	rtcb	100	94.455	Anabas_testudineus
ENSG00000100220	RTCB	100	93.834	ENSACAG00000014817	RTCB	100	93.834	Anolis_carolinensis
ENSG00000100220	RTCB	100	83.960	ENSANAG00000018191	-	91	83.960	Aotus_nancymaae
ENSG00000100220	RTCB	100	63.043	ENSANAG00000023724	-	100	63.043	Aotus_nancymaae
ENSG00000100220	RTCB	100	93.267	ENSACLG00000008367	rtcb	100	94.130	Astatotilapia_calliptera
ENSG00000100220	RTCB	100	94.455	ENSAMXG00000042320	rtcb	100	94.455	Astyanax_mexicanus
ENSG00000100220	RTCB	100	99.604	ENSBTAG00000011070	RTCB	100	99.604	Bos_taurus
ENSG00000100220	RTCB	100	73.069	WBGene00008877	rtcb-1	100	73.069	Caenorhabditis_elegans
ENSG00000100220	RTCB	100	99.604	ENSCJAG00000006128	RTCB	100	99.604	Callithrix_jacchus
ENSG00000100220	RTCB	100	95.446	ENSCAFG00000010789	-	100	95.446	Canis_familiaris
ENSG00000100220	RTCB	100	99.802	ENSCAFG00000001785	RTCB	100	99.802	Canis_familiaris
ENSG00000100220	RTCB	87	96.136	ENSCAFG00020018953	-	99	96.136	Canis_lupus_dingo
ENSG00000100220	RTCB	100	99.802	ENSCAFG00020004890	-	100	99.802	Canis_lupus_dingo
ENSG00000100220	RTCB	100	99.802	ENSCHIG00000027009	-	100	99.802	Capra_hircus
ENSG00000100220	RTCB	100	99.208	ENSTSYG00000012320	RTCB	100	99.208	Carlito_syrichta
ENSG00000100220	RTCB	94	99.161	ENSCAPG00000011647	RTCB	96	99.161	Cavia_aperea
ENSG00000100220	RTCB	100	99.604	ENSCCAG00000000618	RTCB	100	99.604	Cebus_capucinus
ENSG00000100220	RTCB	100	99.604	ENSCATG00000033424	RTCB	100	99.604	Cercocebus_atys
ENSG00000100220	RTCB	100	99.406	ENSCLAG00000007997	RTCB	100	99.406	Chinchilla_lanigera
ENSG00000100220	RTCB	100	99.406	ENSCSAG00000008351	RTCB	100	99.406	Chlorocebus_sabaeus
ENSG00000100220	RTCB	100	85.149	ENSCHOG00000009123	RTCB	100	85.149	Choloepus_hoffmanni
ENSG00000100220	RTCB	100	96.634	ENSCPBG00000023184	RTCB	100	96.634	Chrysemys_picta_bellii
ENSG00000100220	RTCB	100	81.782	ENSCING00000003830	-	100	81.782	Ciona_intestinalis
ENSG00000100220	RTCB	100	82.178	ENSCSAVG00000008124	-	99	82.178	Ciona_savignyi
ENSG00000100220	RTCB	100	95.842	ENSCANG00000001891	RTCB	100	95.842	Colobus_angolensis_palliatus
ENSG00000100220	RTCB	100	99.406	ENSCGRG00001011173	Rtcb	100	99.406	Cricetulus_griseus_chok1gshd
ENSG00000100220	RTCB	93	99.575	ENSCGRG00000009587	-	96	99.575	Cricetulus_griseus_crigri
ENSG00000100220	RTCB	100	93.861	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
ENSG00000100220	RTCB	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSG00000100220	RTCB	100	94.059	ENSDARG00000101047	rtcb	100	94.059	Danio_rerio
ENSG00000100220	RTCB	80	96.806	ENSDNOG00000012425	RTCB	99	96.806	Dasypus_novemcinctus
ENSG00000100220	RTCB	100	99.010	ENSDORG00000010855	Rtcb	100	99.010	Dipodomys_ordii
ENSG00000100220	RTCB	99	85.487	FBgn0032781	RtcB	99	85.487	Drosophila_melanogaster
ENSG00000100220	RTCB	100	92.673	ENSETEG00000001988	RTCB	100	92.673	Echinops_telfairi
ENSG00000100220	RTCB	100	85.743	ENSEBUG00000014235	rtcb	100	85.743	Eptatretus_burgeri
ENSG00000100220	RTCB	100	99.802	ENSEASG00005019059	RTCB	100	99.802	Equus_asinus_asinus
ENSG00000100220	RTCB	100	99.802	ENSECAG00000023998	RTCB	100	99.802	Equus_caballus
ENSG00000100220	RTCB	89	90.157	ENSEEUG00000006251	RTCB	100	90.157	Erinaceus_europaeus
ENSG00000100220	RTCB	100	82.798	ENSELUG00000009275	rtcb	100	82.798	Esox_lucius
ENSG00000100220	RTCB	100	100.000	ENSFCAG00000026480	RTCB	100	100.000	Felis_catus
ENSG00000100220	RTCB	100	97.624	ENSFALG00000013334	RTCB	100	97.624	Ficedula_albicollis
ENSG00000100220	RTCB	100	99.802	ENSFDAG00000018150	RTCB	100	99.802	Fukomys_damarensis
ENSG00000100220	RTCB	100	94.455	ENSFHEG00000009595	rtcb	100	94.455	Fundulus_heteroclitus
ENSG00000100220	RTCB	100	91.881	ENSGMOG00000018882	rtcb	100	91.881	Gadus_morhua
ENSG00000100220	RTCB	100	97.426	ENSGALG00000012611	RTCB	100	97.426	Gallus_gallus
ENSG00000100220	RTCB	100	94.851	ENSGAFG00000004198	rtcb	100	94.851	Gambusia_affinis
ENSG00000100220	RTCB	100	93.861	ENSGACG00000000586	rtcb	100	93.861	Gasterosteus_aculeatus
ENSG00000100220	RTCB	93	95.957	ENSGAGG00000019133	RTCB	98	95.957	Gopherus_agassizii
ENSG00000100220	RTCB	100	100.000	ENSGGOG00000011402	RTCB	100	100.000	Gorilla_gorilla
ENSG00000100220	RTCB	100	93.267	ENSHBUG00000020571	rtcb	100	93.267	Haplochromis_burtoni
ENSG00000100220	RTCB	100	99.802	ENSHGLG00000004492	RTCB	100	99.802	Heterocephalus_glaber_female
ENSG00000100220	RTCB	93	70.551	ENSHGLG00000001066	-	99	70.551	Heterocephalus_glaber_female
ENSG00000100220	RTCB	100	99.802	ENSHGLG00100008965	RTCB	100	99.802	Heterocephalus_glaber_male
ENSG00000100220	RTCB	100	91.519	ENSHCOG00000006450	rtcb	100	91.519	Hippocampus_comes
ENSG00000100220	RTCB	100	94.653	ENSIPUG00000015443	rtcb	100	94.653	Ictalurus_punctatus
ENSG00000100220	RTCB	100	99.604	ENSSTOG00000003878	RTCB	100	99.604	Ictidomys_tridecemlineatus
ENSG00000100220	RTCB	100	99.010	ENSJJAG00000010667	Rtcb	100	99.010	Jaculus_jaculus
ENSG00000100220	RTCB	100	94.455	ENSKMAG00000013178	rtcb	100	94.455	Kryptolebias_marmoratus
ENSG00000100220	RTCB	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSG00000100220	RTCB	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSG00000100220	RTCB	100	95.446	ENSLACG00000013033	RTCB	100	95.446	Latimeria_chalumnae
ENSG00000100220	RTCB	100	94.653	ENSLOCG00000016515	rtcb	99	94.653	Lepisosteus_oculatus
ENSG00000100220	RTCB	100	98.812	ENSLAFG00000002082	RTCB	100	98.812	Loxodonta_africana
ENSG00000100220	RTCB	100	99.406	ENSMFAG00000034419	RTCB	100	99.406	Macaca_fascicularis
ENSG00000100220	RTCB	100	99.406	ENSMMUG00000006720	RTCB	100	99.406	Macaca_mulatta
ENSG00000100220	RTCB	100	99.406	ENSMNEG00000040669	RTCB	100	99.406	Macaca_nemestrina
ENSG00000100220	RTCB	100	99.604	ENSMLEG00000040505	RTCB	100	99.604	Mandrillus_leucophaeus
ENSG00000100220	RTCB	100	94.455	ENSMAMG00000020676	rtcb	100	94.455	Mastacembelus_armatus
ENSG00000100220	RTCB	100	93.267	ENSMZEG00005018942	rtcb	100	93.267	Maylandia_zebra
ENSG00000100220	RTCB	100	97.041	ENSMGAG00000012805	RTCB	100	97.041	Meleagris_gallopavo
ENSG00000100220	RTCB	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSG00000100220	RTCB	100	80.198	ENSMICG00000036677	-	100	80.198	Microcebus_murinus
ENSG00000100220	RTCB	100	99.802	ENSMICG00000013303	-	100	99.802	Microcebus_murinus
ENSG00000100220	RTCB	100	99.406	ENSMOCG00000002440	Rtcb	100	99.406	Microtus_ochrogaster
ENSG00000100220	RTCB	100	94.455	ENSMMOG00000005987	rtcb	100	94.455	Mola_mola
ENSG00000100220	RTCB	100	98.416	ENSMODG00000001414	RTCB	100	98.416	Monodelphis_domestica
ENSG00000100220	RTCB	100	94.653	ENSMALG00000007603	rtcb	100	94.653	Monopterus_albus
ENSG00000100220	RTCB	100	99.406	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.406	Mus_caroli
ENSG00000100220	RTCB	100	99.406	ENSMUSG00000001783	Rtcb	100	99.406	Mus_musculus
ENSG00000100220	RTCB	100	99.406	MGP_PahariEiJ_G0031396	Rtcb	100	99.406	Mus_pahari
ENSG00000100220	RTCB	100	99.406	MGP_SPRETEiJ_G0016507	Rtcb	100	99.406	Mus_spretus
ENSG00000100220	RTCB	100	99.802	ENSMPUG00000012285	RTCB	100	99.802	Mustela_putorius_furo
ENSG00000100220	RTCB	100	97.041	ENSMLUG00000007803	RTCB	100	97.041	Myotis_lucifugus
ENSG00000100220	RTCB	75	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSG00000100220	RTCB	100	93.465	ENSNBRG00000017202	rtcb	100	93.465	Neolamprologus_brichardi
ENSG00000100220	RTCB	100	100.000	ENSNLEG00000004960	RTCB	100	100.000	Nomascus_leucogenys
ENSG00000100220	RTCB	100	73.069	ENSMEUG00000007809	-	100	73.069	Notamacropus_eugenii
ENSG00000100220	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSG00000100220	RTCB	100	65.743	ENSODEG00000005042	-	100	65.743	Octodon_degus
ENSG00000100220	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSG00000100220	RTCB	100	94.455	ENSONIG00000007474	rtcb	100	94.455	Oreochromis_niloticus
ENSG00000100220	RTCB	100	98.416	ENSOANG00000005524	RTCB	100	98.416	Ornithorhynchus_anatinus
ENSG00000100220	RTCB	93	99.574	ENSOCUG00000008270	RTCB	96	99.574	Oryctolagus_cuniculus
ENSG00000100220	RTCB	100	93.861	ENSORLG00000020093	rtcb	100	93.861	Oryzias_latipes
ENSG00000100220	RTCB	100	93.861	ENSORLG00020003706	rtcb	100	93.861	Oryzias_latipes_hni
ENSG00000100220	RTCB	100	94.059	ENSORLG00015002968	rtcb	100	94.059	Oryzias_latipes_hsok
ENSG00000100220	RTCB	100	93.663	ENSOMEG00000021278	rtcb	100	93.663	Oryzias_melastigma
ENSG00000100220	RTCB	100	99.208	ENSOGAG00000001425	RTCB	100	99.208	Otolemur_garnettii
ENSG00000100220	RTCB	100	99.802	ENSOARG00000018008	RTCB	100	99.802	Ovis_aries
ENSG00000100220	RTCB	100	100.000	ENSPPAG00000028667	RTCB	100	100.000	Pan_paniscus
ENSG00000100220	RTCB	100	100.000	ENSPPRG00000004038	RTCB	100	100.000	Panthera_pardus
ENSG00000100220	RTCB	94	96.421	ENSPTIG00000020499	RTCB	97	96.421	Panthera_tigris_altaica
ENSG00000100220	RTCB	100	100.000	ENSPTRG00000014287	RTCB	100	100.000	Pan_troglodytes
ENSG00000100220	RTCB	100	99.406	ENSPANG00000016035	RTCB	100	99.406	Papio_anubis
ENSG00000100220	RTCB	100	93.069	ENSPKIG00000001881	rtcb	100	93.069	Paramormyrops_kingsleyae
ENSG00000100220	RTCB	91	98.043	ENSPSIG00000011690	RTCB	100	98.043	Pelodiscus_sinensis
ENSG00000100220	RTCB	100	94.653	ENSPMGG00000016672	rtcb	100	94.653	Periophthalmus_magnuspinnatus
ENSG00000100220	RTCB	100	99.406	ENSPEMG00000019548	Rtcb	100	99.406	Peromyscus_maniculatus_bairdii
ENSG00000100220	RTCB	100	91.683	ENSPMAG00000005657	rtcb	100	91.683	Petromyzon_marinus
ENSG00000100220	RTCB	100	98.812	ENSPCIG00000009467	RTCB	100	98.812	Phascolarctos_cinereus
ENSG00000100220	RTCB	100	95.248	ENSPFOG00000003058	rtcb	100	95.248	Poecilia_formosa
ENSG00000100220	RTCB	100	95.050	ENSPLAG00000017663	rtcb	100	95.050	Poecilia_latipinna
ENSG00000100220	RTCB	100	95.248	ENSPMEG00000006227	rtcb	100	95.248	Poecilia_mexicana
ENSG00000100220	RTCB	100	94.851	ENSPREG00000018467	rtcb	100	94.851	Poecilia_reticulata
ENSG00000100220	RTCB	100	100.000	ENSPPYG00000011752	RTCB	100	100.000	Pongo_abelii
ENSG00000100220	RTCB	93	81.356	ENSPCAG00000013641	RTCB	100	81.356	Procavia_capensis
ENSG00000100220	RTCB	100	99.604	ENSPCOG00000017243	RTCB	100	99.604	Propithecus_coquereli
ENSG00000100220	RTCB	93	98.936	ENSPVAG00000002380	RTCB	100	98.936	Pteropus_vampyrus
ENSG00000100220	RTCB	100	93.267	ENSPNYG00000022760	rtcb	100	93.267	Pundamilia_nyererei
ENSG00000100220	RTCB	100	95.248	ENSPNAG00000009209	rtcb	100	95.248	Pygocentrus_nattereri
ENSG00000100220	RTCB	100	99.406	ENSRNOG00000004813	Rtcb	100	99.406	Rattus_norvegicus
ENSG00000100220	RTCB	100	90.711	ENSRBIG00000042090	RTCB	100	90.711	Rhinopithecus_bieti
ENSG00000100220	RTCB	100	94.653	ENSSBOG00000020085	-	100	94.653	Saimiri_boliviensis_boliviensis
ENSG00000100220	RTCB	94	99.578	ENSSHAG00000016277	RTCB	100	99.578	Sarcophilus_harrisii
ENSG00000100220	RTCB	100	93.069	ENSSFOG00015000763	rtcb	100	93.069	Scleropages_formosus
ENSG00000100220	RTCB	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSG00000100220	RTCB	100	90.693	ENSSMAG00000005096	rtcb	100	90.693	Scophthalmus_maximus
ENSG00000100220	RTCB	100	93.861	ENSSDUG00000012605	rtcb	100	93.861	Seriola_dumerili
ENSG00000100220	RTCB	100	93.861	ENSSLDG00000019458	rtcb	100	93.861	Seriola_lalandi_dorsalis
ENSG00000100220	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSG00000100220	RTCB	100	96.238	ENSSPUG00000012814	RTCB	100	96.238	Sphenodon_punctatus
ENSG00000100220	RTCB	100	94.851	ENSSPAG00000004623	rtcb	100	94.851	Stegastes_partitus
ENSG00000100220	RTCB	100	100.000	ENSSSCG00000000158	RTCB	100	100.000	Sus_scrofa
ENSG00000100220	RTCB	100	97.624	ENSTGUG00000010947	RTCB	99	97.624	Taeniopygia_guttata
ENSG00000100220	RTCB	91	95.435	ENSTRUG00000009880	rtcb	100	95.435	Takifugu_rubripes
ENSG00000100220	RTCB	100	93.465	ENSTNIG00000002484	rtcb	100	93.465	Tetraodon_nigroviridis
ENSG00000100220	RTCB	100	86.139	ENSTBEG00000004418	RTCB	100	86.139	Tupaia_belangeri
ENSG00000100220	RTCB	93	98.936	ENSTTRG00000006417	RTCB	100	98.936	Tursiops_truncatus
ENSG00000100220	RTCB	100	99.802	ENSUAMG00000022792	RTCB	100	99.802	Ursus_americanus
ENSG00000100220	RTCB	100	99.802	ENSUMAG00000017225	RTCB	100	99.802	Ursus_maritimus
ENSG00000100220	RTCB	100	99.802	ENSVPAG00000005375	RTCB	100	99.802	Vicugna_pacos
ENSG00000100220	RTCB	100	99.802	ENSVVUG00000023408	RTCB	100	99.802	Vulpes_vulpes
ENSG00000100220	RTCB	100	94.653	ENSXETG00000011523	rtcb	100	94.653	Xenopus_tropicalis
ENSG00000100220	RTCB	100	94.851	ENSXMAG00000002855	rtcb	100	94.851	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000971	tRNA exon ligation utilizing 2',3' cyclic phosphate of 5'-exon as source of linkage phosphate	21873635.	IBA	Process
GO:0001701	in utero embryonic development	-	IEA	Process
GO:0001890	placenta development	-	IEA	Process
GO:0003723	RNA binding	22658674.22681889.	HDA	Function
GO:0003972	RNA ligase (ATP) activity	21873635.	IBA	Function
GO:0003972	RNA ligase (ATP) activity	21311021.	IDA	Function
GO:0003972	RNA ligase (ATP) activity	24870230.	IMP	Function
GO:0005515	protein binding	24870230.25814554.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	24608264.	IDA	Component
GO:0005635	nuclear envelope	25087875.	IDA	Component
GO:0005654	nucleoplasm	-	IDA	Component
GO:0005654	nucleoplasm	-	TAS	Component
GO:0005737	cytoplasm	24608264.	IDA	Component
GO:0005789	endoplasmic reticulum membrane	25087875.	IDA	Component
GO:0005829	cytosol	-	IDA	Component
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	21873635.	IBA	Process
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	21311021.24870230.	IDA	Process
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	-	TAS	Process
GO:0017166	vinculin binding	15163412.	IPI	Function
GO:0043231	intracellular membrane-bounded organelle	-	IDA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0072669	tRNA-splicing ligase complex	21873635.	IBA	Component
GO:0072669	tRNA-splicing ligase complex	21311021.24870230.	IDA	Component