EuRBPDB

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  • Basic Information
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  • Description
  • RBDs
  • RBPome
  • Literatures
  • Expression
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSG00000100888 (Gene tree)
Gene ID
57680
Gene Symbol
CHD8
Alias
KIAA1564|DUPLIN|HELSNF1
Full Name
chromodomain helicase DNA binding protein 8
Gene Type
protein_coding
Species
Homo_sapiens
Status
confidence
Strand
Minus strand
Length
70,933 bases
Position
chr14:21,385,194-21,456,126
Accession
20153
RBP type
canonical RBP
Summary
This gene encodes a member of the chromodomain-helicase-DNA binding protein family, which is characterized by a SNF2-like domain and two chromatin organization modifier domains. The encoded protein also contains brahma and kismet domains, which are common to the subfamily of chromodomain-helicase-DNA binding proteins to which this protein belongs. This gene has been shown to function in several processes that include transcriptional regulation, epigenetic remodeling, promotion of cell proliferation, and regulation of RNA synthesis. Allelic variants of this gene are associated with autism spectrum disorder. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2016]
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSP00000493865ResIIIPF04851.155.3e-0811
ENSP00000496730ResIIIPF04851.151.6e-0711
ENSP00000451442ResIIIPF04851.151.7e-0711
ENSP00000406288ResIIIPF04851.151.8e-0711
ENSP00000494402ResIIIPF04851.151.8e-0711
ENSP00000382863ResIIIPF04851.152.4e-0711
ENSP00000451601ResIIIPF04851.152.4e-0711
ENSP00000495070ResIIIPF04851.152.4e-0711
ENSP00000495240ResIIIPF04851.152.4e-0711
ENSP00000451442BRKPF07533.162.4e-1511
ENSP00000406288BRKPF07533.163.3e-1511
ENSP00000494402BRKPF07533.163.3e-1511
ENSP00000382863BRKPF07533.163.8e-1511
ENSP00000451601BRKPF07533.163.8e-1511
ENSP00000495070BRKPF07533.163.8e-1511
ENSP00000495240BRKPF07533.163.8e-1511
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
30607034Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS)OOPS & HEK2932019 Jan 3Queiroz RMLDOI: 10.1038/s41587-018-0001-2
30528433The Human RNA-Binding Proteome and Its Dynamics during Translational ArrestXRNAX & HEK2932018 Dec 6Trendel JDOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity
PIDTitleArticle TimeAuthorDoi
25294932CHD8 regulates neurodevelopmental pathways associated with autism spectrum disorder in neural progenitors.Proc Natl Acad Sci U S A2014 Oct 21Sugathan Adoi: 10.1073/pnas.1405266111
28671691Germline Chd8 haploinsufficiency alters brain development in mouse.Nat Neurosci2017 AugGompers ALdoi: 10.1038/nn.4592
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENST00000646063CHD8-2221852-ENSP00000496565586 (aa)-A0A2R8Y808
ENST00000553283CHD8-203543-ENSP0000045086098 (aa)-G3V2T9
ENST00000557329CHD8-212578--- (aa)--
ENST00000555962CHD8-2101343-ENSP00000495174102 (aa)-A0A2R8YFI9
ENST00000430710CHD8-2027422-ENSP000004062882302 (aa)-Q9HCK8
ENST00000556833CHD8-211416--- (aa)--
ENST00000643469CHD8-2188259-ENSP000004950702581 (aa)-Q9HCK8
ENST00000553622CHD8-204633-ENSP00000450957151 (aa)-G3V303
ENST00000399982CHD8-2018229-ENSP000003828632581 (aa)-Q9HCK8
ENST00000643048CHD8-2172815--- (aa)--
ENST00000557364CHD8-2138163-ENSP000004516012581 (aa)-Q9HCK8
ENST00000642914CHD8-2162818--- (aa)--
ENST00000645206CHD8-2207314--- (aa)--
ENST00000646647CHD8-2258471-ENSP000004952402581 (aa)-Q9HCK8
ENST00000646558CHD8-2245001--- (aa)--
ENST00000555935CHD8-2095458-ENSP000004514421815 (aa)-H0YJG4
ENST00000645929CHD8-2217422-ENSP000004944022302 (aa)-Q9HCK8
ENST00000554384CHD8-207735--- (aa)--
ENST00000553870CHD8-2061174-ENSP00000451071372 (aa)-H0YJA4
ENST00000557727CHD8-2141146--- (aa)--
ENST00000555301CHD8-208918--- (aa)--
ENST00000645140CHD8-2193613-ENSP000004938651102 (aa)-A0A2R8Y4P3
ENST00000553651CHD8-2055583--- (aa)--
ENST00000646340CHD8-2236144-ENSP000004967301995 (aa)-A0A2R8Y840
ENST00000642518CHD8-2151104-ENSP00000496722305 (aa)-A0A2R8YFT4
Gene Model
Click here to download ENSG00000100888's gene model file
Pathways
Pathway IDPathway NameSource
hsa04310Wnt signaling pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSG00000100888's network

* RBP PPI network refers to all genes directly bind to RBP
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSG00000100888CHD88685.393ENSAPOG00000015560chd88260.532Acanthochromis_polyacanthus
ENSG00000100888CHD88784.270ENSAPOG00000009351chd76462.150Acanthochromis_polyacanthus
ENSG00000100888CHD88686.364ENSAMEG00000005699CHD75868.915Ailuropoda_melanoleuca
ENSG00000100888CHD810098.183ENSAMEG00000006307CHD810098.183Ailuropoda_melanoleuca
ENSG00000100888CHD88684.444ENSACIG00000006440chd88962.137Amphilophus_citrinellus
ENSG00000100888CHD88685.227ENSACIG00000001590chd76071.288Amphilophus_citrinellus
ENSG00000100888CHD88685.393ENSAOCG00000016793chd88961.441Amphiprion_ocellaris
ENSG00000100888CHD88685.227ENSAOCG00000002337chd76072.155Amphiprion_ocellaris
ENSG00000100888CHD88785.393ENSAPEG00000010332chd75066.517Amphiprion_percula
ENSG00000100888CHD88685.393ENSATEG00000007108chd89060.658Anabas_testudineus
ENSG00000100888CHD88685.227ENSATEG00000002590chd76870.309Anabas_testudineus
ENSG00000100888CHD88686.364ENSAPLG00000005873CHD76563.479Anas_platyrhynchos
ENSG00000100888CHD88695.455ENSACAG00000003139CHD89074.702Anolis_carolinensis
ENSG00000100888CHD88686.364ENSACAG00000005760CHD75869.231Anolis_carolinensis
ENSG00000100888CHD88686.364ENSANAG00000035300CHD76569.000Aotus_nancymaae
ENSG00000100888CHD810099.348ENSANAG00000037714CHD810099.348Aotus_nancymaae
ENSG00000100888CHD88685.393ENSACLG00000019692chd89364.941Astatotilapia_calliptera
ENSG00000100888CHD88685.227ENSAMXG00000006180chd76067.366Astyanax_mexicanus
ENSG00000100888CHD88686.364ENSBTAG00000021841CHD76268.945Bos_taurus
ENSG00000100888CHD810098.567ENSBTAG00000020422CHD810098.567Bos_taurus
ENSG00000100888CHD810099.344ENSCJAG00000009002CHD810099.219Callithrix_jacchus
ENSG00000100888CHD88686.364ENSCJAG00000009025CHD76067.114Callithrix_jacchus
ENSG00000100888CHD810098.183ENSCAFG00000005626CHD810098.500Canis_familiaris
ENSG00000100888CHD88686.364ENSCAFG00000007167CHD76268.804Canis_familiaris
ENSG00000100888CHD810098.481ENSCAFG00020014565CHD810098.481Canis_lupus_dingo
ENSG00000100888CHD88686.364ENSCAFG00020015856CHD76168.432Canis_lupus_dingo
ENSG00000100888CHD810098.490ENSCHIG00000026157CHD810098.490Capra_hircus
ENSG00000100888CHD88686.364ENSCHIG00000011729CHD76066.815Capra_hircus
ENSG00000100888CHD88686.364ENSTSYG00000004018CHD75769.000Carlito_syrichta
ENSG00000100888CHD810098.340ENSTSYG00000011939CHD810098.340Carlito_syrichta
ENSG00000100888CHD88686.364ENSCAPG00000007952CHD75765.189Cavia_aperea
ENSG00000100888CHD89996.711ENSCAPG00000016749CHD89990.680Cavia_aperea
ENSG00000100888CHD89998.345ENSCPOG00000002538CHD810097.020Cavia_porcellus
ENSG00000100888CHD88686.364ENSCPOG00000013385CHD75868.738Cavia_porcellus
ENSG00000100888CHD810099.435ENSCCAG00000020467CHD810099.435Cebus_capucinus
ENSG00000100888CHD88686.364ENSCCAG00000025831CHD75868.867Cebus_capucinus
ENSG00000100888CHD88686.364ENSCATG00000020229CHD76569.067Cercocebus_atys
ENSG00000100888CHD810099.652ENSCATG00000004861CHD810099.652Cercocebus_atys
ENSG00000100888CHD88686.364ENSCLAG00000004679CHD76662.605Chinchilla_lanigera
ENSG00000100888CHD89998.746ENSCLAG00000001966CHD810097.445Chinchilla_lanigera
ENSG00000100888CHD88686.364ENSCSAG00000014349CHD75868.954Chlorocebus_sabaeus
ENSG00000100888CHD89999.448ENSCSAG00000016489CHD810099.225Chlorocebus_sabaeus
ENSG00000100888CHD89995.862ENSCHOG00000003782CHD810093.015Choloepus_hoffmanni
ENSG00000100888CHD88686.364ENSCHOG00000008478CHD76484.801Choloepus_hoffmanni
ENSG00000100888CHD89591.096ENSCPBG00000012687CHD89882.042Chrysemys_picta_bellii
ENSG00000100888CHD88686.364ENSCPBG00000021517CHD77770.580Chrysemys_picta_bellii
ENSG00000100888CHD88667.778ENSCSAVG00000005900-10064.832Ciona_savignyi
ENSG00000100888CHD88686.364ENSCANG00000041382CHD75868.933Colobus_angolensis_palliatus
ENSG00000100888CHD810099.609ENSCANG00000042948CHD810099.609Colobus_angolensis_palliatus
ENSG00000100888CHD89997.792ENSCGRG00001014351Chd810096.437Cricetulus_griseus_chok1gshd
ENSG00000100888CHD88686.364ENSCGRG00001011949Chd76569.169Cricetulus_griseus_chok1gshd
ENSG00000100888CHD89997.792ENSCGRG00000009710Chd810096.437Cricetulus_griseus_crigri
ENSG00000100888CHD88686.364ENSCGRG00000000481Chd76664.098Cricetulus_griseus_crigri
ENSG00000100888CHD88683.146ENSCSEG00000021155chd88261.702Cynoglossus_semilaevis
ENSG00000100888CHD88784.270ENSCSEG00000017886chd76264.861Cynoglossus_semilaevis
ENSG00000100888CHD88685.227ENSCVAG00000017584chd75066.816Cyprinodon_variegatus
ENSG00000100888CHD88785.393ENSDARG00000075211chd77267.785Danio_rerio
ENSG00000100888CHD88683.146ENSDARG00000075543chd88768.948Danio_rerio
ENSG00000100888CHD810097.910ENSDNOG00000005838CHD810097.910Dasypus_novemcinctus
ENSG00000100888CHD88686.364ENSDNOG00000011674CHD76568.779Dasypus_novemcinctus
ENSG00000100888CHD88686.364ENSDORG00000003515Chd75868.954Dipodomys_ordii
ENSG00000100888CHD89996.638ENSDORG00000002050Chd89896.413Dipodomys_ordii
ENSG00000100888CHD810096.393ENSETEG00000012353CHD89693.835Echinops_telfairi
ENSG00000100888CHD88685.227ENSEBUG00000007607chd88260.261Eptatretus_burgeri
ENSG00000100888CHD88686.364ENSEASG00005016258CHD75869.092Equus_asinus_asinus
ENSG00000100888CHD810098.785ENSEASG00005010882CHD810098.785Equus_asinus_asinus
ENSG00000100888CHD810098.606ENSECAG00000016102CHD810098.606Equus_caballus
ENSG00000100888CHD88686.364ENSECAG00000001445CHD76569.092Equus_caballus
ENSG00000100888CHD88686.364ENSEEUG00000013559CHD75178.298Erinaceus_europaeus
ENSG00000100888CHD89996.552ENSEEUG00000003523CHD881100.000Erinaceus_europaeus
ENSG00000100888CHD88682.955ENSELUG00000024442chd76063.320Esox_lucius
ENSG00000100888CHD88684.444ENSELUG00000004302chd89063.329Esox_lucius
ENSG00000100888CHD88686.364ENSFCAG00000003849CHD75868.879Felis_catus
ENSG00000100888CHD810098.490ENSFCAG00000013859CHD810098.911Felis_catus
ENSG00000100888CHD88686.364ENSFALG00000005570CHD76463.360Ficedula_albicollis
ENSG00000100888CHD89998.545ENSFDAG00000011368CHD810097.446Fukomys_damarensis
ENSG00000100888CHD88686.364ENSFDAG00000000528CHD75967.873Fukomys_damarensis
ENSG00000100888CHD88685.227ENSFHEG00000001311chd75066.344Fundulus_heteroclitus
ENSG00000100888CHD88681.818ENSGMOG00000004232chd76070.190Gadus_morhua
ENSG00000100888CHD88681.111ENSGMOG00000015075chd89467.831Gadus_morhua
ENSG00000100888CHD88686.364ENSGALG00000041080CHD75966.433Gallus_gallus
ENSG00000100888CHD88680.899ENSGAFG00000015210-9870.692Gambusia_affinis
ENSG00000100888CHD88784.270ENSGAFG00000006858chd75966.816Gambusia_affinis
ENSG00000100888CHD88684.091ENSGACG00000014897chd76269.543Gasterosteus_aculeatus
ENSG00000100888CHD88683.333ENSGACG00000014096chd88269.029Gasterosteus_aculeatus
ENSG00000100888CHD89589.695ENSGAGG00000022951CHD89985.354Gopherus_agassizii
ENSG00000100888CHD88785.393ENSGAGG00000017996CHD78270.242Gopherus_agassizii
ENSG00000100888CHD88686.364ENSGGOG00000012224CHD75869.067Gorilla_gorilla
ENSG00000100888CHD8100100.000ENSGGOG00000002251CHD810099.957Gorilla_gorilla
ENSG00000100888CHD88685.393ENSHBUG00000002850chd88961.567Haplochromis_burtoni
ENSG00000100888CHD88686.364ENSHGLG00000017268CHD76563.846Heterocephalus_glaber_female
ENSG00000100888CHD89998.645ENSHGLG00000003559CHD810097.638Heterocephalus_glaber_female
ENSG00000100888CHD89998.645ENSHGLG00100001031CHD810097.638Heterocephalus_glaber_male
ENSG00000100888CHD88686.364ENSHGLG00100015649CHD75869.354Heterocephalus_glaber_male
ENSG00000100888CHD88682.955ENSHCOG00000016611chd89162.941Hippocampus_comes
ENSG00000100888CHD88685.227ENSHCOG00000014380chd75872.578Hippocampus_comes
ENSG00000100888CHD88680.899ENSIPUG00000019891chd89061.804Ictalurus_punctatus
ENSG00000100888CHD88685.227ENSIPUG00000007585chd78163.425Ictalurus_punctatus
ENSG00000100888CHD88686.364ENSSTOG00000011949CHD76067.178Ictidomys_tridecemlineatus
ENSG00000100888CHD810097.909ENSSTOG00000001854CHD810097.909Ictidomys_tridecemlineatus
ENSG00000100888CHD88686.364ENSJJAG00000022064Chd75769.267Jaculus_jaculus
ENSG00000100888CHD89998.093ENSJJAG00000000408Chd810096.752Jaculus_jaculus
ENSG00000100888CHD88684.270ENSKMAG00000020106chd88960.691Kryptolebias_marmoratus
ENSG00000100888CHD88685.227ENSKMAG00000009724chd75066.617Kryptolebias_marmoratus
ENSG00000100888CHD89976.843ENSLACG00000011367CHD87976.297Latimeria_chalumnae
ENSG00000100888CHD88685.227ENSLACG00000002461CHD76663.475Latimeria_chalumnae
ENSG00000100888CHD88685.227ENSLOCG00000005062chd76461.190Lepisosteus_oculatus
ENSG00000100888CHD89999.310ENSLAFG00000009358CHD810097.754Loxodonta_africana
ENSG00000100888CHD88686.364ENSLAFG00000000403CHD76767.497Loxodonta_africana
ENSG00000100888CHD810099.652ENSMFAG00000035402CHD810099.652Macaca_fascicularis
ENSG00000100888CHD88686.364ENSMFAG00000041825CHD75969.067Macaca_fascicularis
ENSG00000100888CHD810099.609ENSMMUG00000015002CHD810099.609Macaca_mulatta
ENSG00000100888CHD88686.364ENSMMUG00000011584CHD75869.067Macaca_mulatta
ENSG00000100888CHD810099.566ENSMNEG00000031076CHD810099.566Macaca_nemestrina
ENSG00000100888CHD88686.364ENSMNEG00000040978CHD75869.000Macaca_nemestrina
ENSG00000100888CHD88686.364ENSMLEG00000038817CHD75869.067Mandrillus_leucophaeus
ENSG00000100888CHD810099.652ENSMLEG00000035911CHD810099.652Mandrillus_leucophaeus
ENSG00000100888CHD88683.333ENSMAMG00000016297chd88960.350Mastacembelus_armatus
ENSG00000100888CHD88685.393ENSMZEG00005012027chd88962.030Maylandia_zebra
ENSG00000100888CHD88686.364ENSMGAG00000011092CHD75966.838Meleagris_gallopavo
ENSG00000100888CHD88686.364ENSMAUG00000001000Chd76766.818Mesocricetus_auratus
ENSG00000100888CHD89695.222ENSMAUG00000015827Chd810088.936Mesocricetus_auratus
ENSG00000100888CHD88686.364ENSMICG00000002430CHD75869.354Microcebus_murinus
ENSG00000100888CHD89999.340ENSMICG00000007735CHD810098.302Microcebus_murinus
ENSG00000100888CHD89997.442ENSMOCG00000013700Chd810096.762Microtus_ochrogaster
ENSG00000100888CHD88686.364ENSMOCG00000011408Chd76767.072Microtus_ochrogaster
ENSG00000100888CHD88684.270ENSMMOG00000013335chd88961.103Mola_mola
ENSG00000100888CHD89995.434ENSMODG00000006219CHD89993.653Monodelphis_domestica
ENSG00000100888CHD88686.364ENSMODG00000008488CHD76067.093Monodelphis_domestica
ENSG00000100888CHD88685.393ENSMALG00000011572chd89061.210Monopterus_albus
ENSG00000100888CHD88685.227ENSMALG00000004389chd75871.948Monopterus_albus
ENSG00000100888CHD89997.494MGP_CAROLIEiJ_G0019237Chd810096.130Mus_caroli
ENSG00000100888CHD88686.364MGP_CAROLIEiJ_G0025797Chd76569.190Mus_caroli
ENSG00000100888CHD89997.644ENSMUSG00000053754Chd810096.130Mus_musculus
ENSG00000100888CHD88686.364ENSMUSG00000041235Chd76569.328Mus_musculus
ENSG00000100888CHD88686.364MGP_PahariEiJ_G0023920Chd75769.939Mus_pahari
ENSG00000100888CHD89997.541MGP_PahariEiJ_G0030258Chd810096.282Mus_pahari
ENSG00000100888CHD88686.364MGP_SPRETEiJ_G0026745Chd76569.256Mus_spretus
ENSG00000100888CHD88686.364ENSMPUG00000002338CHD76668.799Mustela_putorius_furo
ENSG00000100888CHD810098.529ENSMPUG00000000174CHD810098.529Mustela_putorius_furo
ENSG00000100888CHD89999.047ENSMLUG00000001878CHD810097.795Myotis_lucifugus
ENSG00000100888CHD88686.364ENSMLUG00000015266CHD76065.121Myotis_lucifugus
ENSG00000100888CHD88686.364ENSNGAG00000010767Chd76067.178Nannospalax_galili
ENSG00000100888CHD89997.943ENSNGAG00000022658Chd810096.902Nannospalax_galili
ENSG00000100888CHD88685.227ENSNBRG00000001280chd77967.475Neolamprologus_brichardi
ENSG00000100888CHD88685.393ENSNBRG00000017428chd88261.213Neolamprologus_brichardi
ENSG00000100888CHD899100.000ENSNLEG00000014445CHD810098.957Nomascus_leucogenys
ENSG00000100888CHD88686.364ENSNLEG00000002027CHD75869.000Nomascus_leucogenys
ENSG00000100888CHD86778.313ENSMEUG00000010045CHD75267.541Notamacropus_eugenii
ENSG00000100888CHD89993.103ENSMEUG00000011732CHD810089.211Notamacropus_eugenii
ENSG00000100888CHD88686.364ENSOPRG00000004404-5083.178Ochotona_princeps
ENSG00000100888CHD89097.111ENSOPRG00000016120CHD89695.556Ochotona_princeps
ENSG00000100888CHD88686.364ENSODEG00000002424CHD75868.573Octodon_degus
ENSG00000100888CHD89998.445ENSODEG00000001047CHD89996.980Octodon_degus
ENSG00000100888CHD88685.393ENSONIG00000015569chd89564.988Oreochromis_niloticus
ENSG00000100888CHD88685.227ENSONIG00000016614chd75165.860Oreochromis_niloticus
ENSG00000100888CHD88686.364ENSOANG00000005042CHD77169.000Ornithorhynchus_anatinus
ENSG00000100888CHD88686.364ENSOCUG00000010034CHD77169.200Oryctolagus_cuniculus
ENSG00000100888CHD89998.846ENSOCUG00000010822CHD810098.276Oryctolagus_cuniculus
ENSG00000100888CHD88683.333ENSORLG00000012103chd88161.810Oryzias_latipes
ENSG00000100888CHD88683.333ENSORLG00020008031chd88261.528Oryzias_latipes_hni
ENSG00000100888CHD88684.270ENSOMEG00000012832chd87768.257Oryzias_melastigma
ENSG00000100888CHD810098.104ENSOGAG00000002722CHD810098.104Otolemur_garnettii
ENSG00000100888CHD88686.364ENSOGAG00000013905CHD75869.369Otolemur_garnettii
ENSG00000100888CHD810098.413ENSOARG00000019643CHD810098.413Ovis_aries
ENSG00000100888CHD88686.364ENSOARG00000016176CHD76065.647Ovis_aries
ENSG00000100888CHD88686.364ENSPPAG00000033330CHD75869.133Pan_paniscus
ENSG00000100888CHD810098.957ENSPPAG00000039987CHD810098.957Pan_paniscus
ENSG00000100888CHD810098.653ENSPPRG00000006591CHD810098.653Panthera_pardus
ENSG00000100888CHD88686.364ENSPPRG00000022248CHD75868.804Panthera_pardus
ENSG00000100888CHD810098.741ENSPTIG00000021989CHD810098.741Panthera_tigris_altaica
ENSG00000100888CHD88686.364ENSPTIG00000011702CHD76068.260Panthera_tigris_altaica
ENSG00000100888CHD8100100.000ENSPTRG00000006124CHD810099.913Pan_troglodytes
ENSG00000100888CHD88686.364ENSPTRG00000020286CHD75869.133Pan_troglodytes
ENSG00000100888CHD88686.364ENSPANG00000018419CHD75869.067Papio_anubis
ENSG00000100888CHD810099.609ENSPANG00000011742CHD810099.609Papio_anubis
ENSG00000100888CHD88684.270ENSPKIG00000009142chd88768.531Paramormyrops_kingsleyae
ENSG00000100888CHD88685.227ENSPKIG00000009637chd75066.624Paramormyrops_kingsleyae
ENSG00000100888CHD88686.364ENSPSIG00000012003CHD75966.966Pelodiscus_sinensis
ENSG00000100888CHD88784.270ENSPMGG00000018543chd76266.825Periophthalmus_magnuspinnatus
ENSG00000100888CHD88684.091ENSPMGG00000019850chd89977.273Periophthalmus_magnuspinnatus
ENSG00000100888CHD88687.500ENSPEMG00000023028Chd76767.489Peromyscus_maniculatus_bairdii
ENSG00000100888CHD89998.043ENSPEMG00000022977Chd810096.437Peromyscus_maniculatus_bairdii
ENSG00000100888CHD89994.467ENSPCIG00000020931CHD810093.827Phascolarctos_cinereus
ENSG00000100888CHD88686.364ENSPCIG00000000025-6761.812Phascolarctos_cinereus
ENSG00000100888CHD88685.227ENSPFOG00000004891chd79364.642Poecilia_formosa
ENSG00000100888CHD88684.270ENSPFOG00000016369chd88961.240Poecilia_formosa
ENSG00000100888CHD88677.273ENSPFOG00000010939-6265.504Poecilia_formosa
ENSG00000100888CHD88685.227ENSPLAG00000023322chd75066.149Poecilia_latipinna
ENSG00000100888CHD88683.333ENSPLAG00000018522chd88361.934Poecilia_latipinna
ENSG00000100888CHD88683.333ENSPMEG00000006541chd88361.707Poecilia_mexicana
ENSG00000100888CHD88685.227ENSPMEG00000005879chd76066.989Poecilia_mexicana
ENSG00000100888CHD88684.270ENSPREG00000021867chd88160.872Poecilia_reticulata
ENSG00000100888CHD88685.227ENSPREG00000014744chd79664.202Poecilia_reticulata
ENSG00000100888CHD88686.364ENSPPYG00000018618CHD75869.200Pongo_abelii
ENSG00000100888CHD810099.651ENSPPYG00000005596CHD810099.651Pongo_abelii
ENSG00000100888CHD89997.030ENSPCAG00000007099CHD88699.920Procavia_capensis
ENSG00000100888CHD88686.364ENSPCOG00000013850CHD75869.133Propithecus_coquereli
ENSG00000100888CHD89999.013ENSPCOG00000014628CHD810097.423Propithecus_coquereli
ENSG00000100888CHD88687.500ENSPVAG00000011873CHD75474.940Pteropus_vampyrus
ENSG00000100888CHD89997.931ENSPVAG00000000272CHD810097.179Pteropus_vampyrus
ENSG00000100888CHD88685.393ENSPNYG00000018020chd88261.657Pundamilia_nyererei
ENSG00000100888CHD88685.227ENSPNYG00000012490chd78065.475Pundamilia_nyererei
ENSG00000100888CHD88684.270ENSPNAG00000003683chd88962.736Pygocentrus_nattereri
ENSG00000100888CHD88685.227ENSPNAG00000011245chd76962.595Pygocentrus_nattereri
ENSG00000100888CHD88686.364ENSRNOG00000006689Chd76568.829Rattus_norvegicus
ENSG00000100888CHD89997.842ENSRNOG00000025011Chd810096.359Rattus_norvegicus
ENSG00000100888CHD89999.340ENSRBIG00000039239CHD810096.023Rhinopithecus_bieti
ENSG00000100888CHD88686.364ENSRBIG00000043575CHD75768.692Rhinopithecus_bieti
ENSG00000100888CHD810099.574ENSRROG00000044285CHD810099.574Rhinopithecus_roxellana
ENSG00000100888CHD88686.364ENSRROG00000008981CHD75869.067Rhinopithecus_roxellana
ENSG00000100888CHD88686.364ENSSBOG00000021462CHD75869.000Saimiri_boliviensis_boliviensis
ENSG00000100888CHD810099.070ENSSBOG00000023442CHD810099.259Saimiri_boliviensis_boliviensis
ENSG00000100888CHD88686.364ENSSHAG00000011522CHD76067.007Sarcophilus_harrisii
ENSG00000100888CHD89995.038ENSSHAG00000008118CHD810092.830Sarcophilus_harrisii
ENSG00000100888CHD88683.146ENSSFOG00015011577chd88261.546Scleropages_formosus
ENSG00000100888CHD88685.227ENSSFOG00015015077chd76661.837Scleropages_formosus
ENSG00000100888CHD88677.273ENSSMAG00000001453-5563.962Scophthalmus_maximus
ENSG00000100888CHD88783.516ENSSMAG00000014060chd88961.948Scophthalmus_maximus
ENSG00000100888CHD88684.270ENSSDUG00000012439chd89061.091Seriola_dumerili
ENSG00000100888CHD88684.270ENSSLDG00000001679chd88961.781Seriola_lalandi_dorsalis
ENSG00000100888CHD88686.364ENSSARG00000003387CHD75476.963Sorex_araneus
ENSG00000100888CHD810098.689ENSSARG00000004849CHD810096.081Sorex_araneus
ENSG00000100888CHD88686.364ENSSPUG00000009235CHD76067.594Sphenodon_punctatus
ENSG00000100888CHD88685.227ENSSPAG00000006320chd76169.328Stegastes_partitus
ENSG00000100888CHD88685.393ENSSPAG00000022956chd89061.325Stegastes_partitus
ENSG00000100888CHD88686.364ENSSSCG00000006231CHD75868.792Sus_scrofa
ENSG00000100888CHD810098.568ENSSSCG00000002127CHD810098.568Sus_scrofa
ENSG00000100888CHD88686.364ENSTGUG00000011196CHD76463.610Taeniopygia_guttata
ENSG00000100888CHD85062.432ENSTRUG00000007574-7765.954Takifugu_rubripes
ENSG00000100888CHD88685.227ENSTRUG00000008632chd75573.651Takifugu_rubripes
ENSG00000100888CHD88684.270ENSTRUG00000006682chd89879.742Takifugu_rubripes
ENSG00000100888CHD88685.227ENSTNIG00000002647chd710058.996Tetraodon_nigroviridis
ENSG00000100888CHD88685.393ENSTNIG00000007932chd89563.930Tetraodon_nigroviridis
ENSG00000100888CHD89099.049ENSTBEG00000012606CHD884100.000Tupaia_belangeri
ENSG00000100888CHD89995.917ENSTTRG00000016076CHD810095.960Tursiops_truncatus
ENSG00000100888CHD88684.091ENSTTRG00000004221CHD75968.158Tursiops_truncatus
ENSG00000100888CHD89998.403ENSUAMG00000004198CHD810098.036Ursus_americanus
ENSG00000100888CHD88686.364ENSUAMG00000025734CHD76769.068Ursus_americanus
ENSG00000100888CHD810098.307ENSUMAG00000004045CHD810098.307Ursus_maritimus
ENSG00000100888CHD88686.364ENSUMAG00000010436CHD78471.012Ursus_maritimus
ENSG00000100888CHD88895.050ENSVPAG00000007359CHD873100.000Vicugna_pacos
ENSG00000100888CHD89999.097ENSVVUG00000009444CHD810098.824Vulpes_vulpes
ENSG00000100888CHD88686.364ENSVVUG00000018063CHD76168.804Vulpes_vulpes
ENSG00000100888CHD88686.364ENSXETG00000026004chd86962.280Xenopus_tropicalis
ENSG00000100888CHD88691.011ENSXETG00000017194CHD810086.632Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II25294932.IMPProcess
GO:0001701in utero embryonic development-IEAProcess
GO:0002039p53 binding-ISSFunction
GO:0003677DNA binding18378692.IMPFunction
GO:0003678DNA helicase activity18378692.IMPFunction
GO:0003682chromatin binding22083958.IDAFunction
GO:0005515protein binding15960975.17938208.18378692.20085832.20453063.26816381.IPIFunction
GO:0005524ATP binding18378692.IDAFunction
GO:0005634nucleus18378692.20453063.IDAComponent
GO:0005654nucleoplasm-IDAComponent
GO:0005654nucleoplasm-TASComponent
GO:0007420brain development24998929.IMPProcess
GO:0008013beta-catenin binding18378692.22083958.IDAFunction
GO:0008094DNA-dependent ATPase activity18378692.IDAFunction
GO:0016055Wnt signaling pathway-IEAProcess
GO:0032508DNA duplex unwinding-IEAProcess
GO:0032991protein-containing complex18378692.IDAComponent
GO:0035064methylated histone binding17938208.IDAFunction
GO:0035176social behavior-IEAProcess
GO:0042393histone binding-ISSFunction
GO:0043044ATP-dependent chromatin remodeling18378692.IMPProcess
GO:0045892negative regulation of transcription, DNA-templated18378692.IMPProcess
GO:0045893positive regulation of transcription, DNA-templated17938208.IDAProcess
GO:0045944positive regulation of transcription by RNA polymerase II17938208.25294932.IMPProcess
GO:0045945positive regulation of transcription by RNA polymerase III17938208.IMPProcess
GO:0048565digestive tract development24998929.IMPProcess
GO:0060134prepulse inhibition-IEAProcess
GO:0070016armadillo repeat domain binding-IEAFunction
GO:0071339MLL1 complex15960975.IDAComponent
GO:0090090negative regulation of canonical Wnt signaling pathway18378692.22083958.IDAProcess
GO:2000270negative regulation of fibroblast apoptotic process-IEAProcess

Cancer associated literatures
PIDTitleArticle TimeAuthorDoi
26626481NSD3-Short Is an Adaptor Protein that Couples BRD4 to the CHD8 Chromatin Remodeler.Mol Cell2015 Dec 17Shen Cdoi: 10.1016/j.molcel.2015.10.033
25499215Frequent disruption of chromodomain helicase DNA-binding protein 8 (CHD8) and functionally associated chromatin regulators in prostate cancer.Neoplasia2014 DecDamaschke NAdoi: 10.1016/j.neo.2014.10.003.
23835524CHD8 is an independent prognostic indicator that regulates Wnt/β-catenin signaling and the cell cycle in gastric cancer.Oncol Rep2013 SepSawada Gdoi: 10.3892/or.2013.2597
20215423Improved survival in BRCA2 carriers with ovarian cancer.Fam Cancer2007Pal T-

Expression in 33 cancers

Mutations
CancerChrPosition Mutation TypedbSNPProtein-change Allele FreqRBD
ACCchr1421394997Frame_Shift_InsnovelA1769Rfs*190.67
BLCAchr1421393735SilentnovelE2020E0.22
BLCAchr1421400943Missense_MutationnovelR1434S0.33
BLCAchr1421415897Nonsense_MutationnovelS576*0.4
BLCAchr1421405345Missense_MutationnovelQ1057H0.18
BLCAchr1421402023Silentrs781129091Q1332Q0.06
BLCAchr1421402413Missense_MutationNAD1269H0.05
BLCAchr1421430975SilentnovelV223V0.27
BLCAchr1421395301Missense_MutationNAE1727K0.2
BLCAchr1421429141SilentNAQ346Q0.09
BLCAchr1421431184Nonsense_MutationnovelQ154*0.61
BLCAchr1421414943SilentnovelK673K0.56
BLCAchr1421408526Missense_MutationnovelG839V0.33
BLCAchr1421394048Missense_MutationnovelP1916H0.43
BLCAchr1421400286Missense_Mutationrs192277407R1531H0.33
BLCAchr1421426186Nonsense_MutationNAS553*0.41
BLCAchr1421393232SilentnovelL2114L0.24
BLCAchr1421400557Missense_MutationnovelE1476K0.58
BLCAchr1421400939Missense_MutationnovelD1436N0.48
BLCAchr1421405242Missense_MutationNAR1092C0.13
BLCAchr1421408436Missense_MutationNAS869F0.21
BLCAchr1421405744Missense_MutationnovelG1010R0.05
BLCAchr1421402037Missense_MutationNAE1328K0.12
BLCAchr1421393220SilentnovelE2118E0.48
BLCAchr1421394007Missense_MutationNAD1930N0.33
BRCAchr1421403461SilentNAI1170I0.25
BRCAchr1421393816SilentnovelT1993T0.07
BRCAchr1421401975Frame_Shift_DelNAG1349Vfs*350.35
BRCAchr1421391016Frame_Shift_InsNAN2371Kfs*20.28
BRCAchr1421401041Nonsense_MutationNAR1402*0.23
BRCAchr1421393173Missense_MutationnovelD2134A0.13
BRCAchr1421391532SilentnovelP2332P0.05
BRCAchr1421394311SilentNAR1855R0.18
BRCAchr1421394312Missense_MutationNAR1855H0.19
BRCAchr1421391015Missense_MutationnovelN2372H0.23
BRCAchr1421401000Frame_Shift_DelnovelL1411Wfs*590.06
BRCAchr1421400604Missense_MutationnovelR1460Q0.15
BRCAchr1421393205SilentNAL2123L0.36
BRCAchr1421431228Missense_MutationnovelS139C0.1
BRCAchr1421391550SilentNAL2326L0.17
BRCAchr1421400553Missense_Mutationrs752291265R1477Q0.21
BRCAchr1421400037Silentrs372730716L1587L0.24
BRCAchr1421405421Missense_MutationNAR1032T0.59
BRCAchr14213853113'UTRnovel0.16
BRCAchr1421395112Silentrs768006197V1730V0.13
BRCAchr1421394033Missense_MutationNAP1921H0.25
BRCAchr1421390968SilentnovelA2387A0.1
BRCAchr1421400903Missense_Mutationrs759526072R1448W0.1
BRCAchr1421414943Missense_MutationNAK673N0.14
BRCAchr1421399623Missense_MutationNAL1634V0.27
BRCAchr1421401470Missense_MutationNAD1369V0.23
BRCAchr1421391015Missense_MutationnovelN2372H0.07
BRCAchr1421400469Missense_MutationNAW1505L0.25
BRCAchr1421409897Missense_Mutationrs763874660R773Q0.06
BRCAchr1421428196Missense_MutationnovelS425I0.1
CESCchr1421405397Frame_Shift_DelNAN1040Tfs*120.33
CESCchr1421400545Missense_MutationNAE1480Q0.07
CESCchr1421431475Missense_MutationNAD57N0.28
CESCchr1421393628Missense_Mutationrs572070685R2056Q0.2
CESCchr1421429127Frame_Shift_InsNAI351Nfs*700.42
CESCchr1421401030Frame_Shift_InsnovelR1406Afs*40.14
CESCchr1421406921Missense_MutationnovelD948H0.33
CESCchr1421393570Missense_MutationNAL2075F0.19
CESCchr1421415891Missense_MutationNAR578H0.35
CESCchr1421392548Nonsense_MutationnovelR2244*0.41
CESCchr1421395051Missense_MutationnovelR1751C0.14
CESCchr1421400566Missense_MutationnovelR1473C0.38
CESCchr1421403634Missense_Mutationrs749785996R1113C0.39
CESCchr1421408754SilentnovelR812R0.43
CESCchr1421429238Missense_MutationnovelI314T0.39
CESCchr1421393117Missense_MutationNAE2153Q0.71
CESCchr14213852483'UTRnovel0.41
CESCchr1421400230Missense_MutationNAD1550H0.26
CESCchr1421431051Missense_MutationNAG198E0.28
CESCchr1421414324Missense_MutationnovelQ707E0.38
CHOLchr1421429280Frame_Shift_InsnovelQ300Pfs*1210.34
COADchr1421403648Frame_Shift_InsNAI1108Nfs*70.24
COADchr1421391016Frame_Shift_InsNAN2371Kfs*20.25
COADchr14213855663'UTRnovel0.4
COADchr1421405448Missense_MutationNAA1023V0.26
COADchr1421394187Frame_Shift_InsnovelD1870Rfs*30.3
COADchr1421394082Frame_Shift_DelNAL1905Ffs*300.28
COADchr1421399628Missense_MutationnovelS1632L0.23
COADchr1421415891Missense_MutationNAR578H0.33
COADchr1421391017Frame_Shift_Delrs751094013N2371Ifs*60.32
COADchr1421409975Missense_MutationnovelY747C0.12
COADchr1421393713Missense_MutationnovelH2028Y0.24
COADchr1421393913Missense_MutationnovelR1961H0.48
COADchr1421403595Nonsense_MutationNAQ1126*0.42
COADchr1421414958Missense_MutationNAF668L0.29
COADchr1421414974Missense_MutationNAT663I0.27
COADchr1421397926Missense_MutationnovelA1650T0.32
COADchr1421394106Missense_MutationnovelR1897W0.41
COADchr1421385863Missense_MutationNAP2499H0.4
COADchr1421429127Frame_Shift_InsNAI351Nfs*700.25
COADchr1421391016Frame_Shift_InsNAN2371Kfs*20.24
COADchr1421395035Missense_MutationNAY1756S0.44
COADchr1421403582Missense_Mutationrs765025620R1130H0.24
COADchr1421409952Missense_MutationNAP755S0.25
COADchr1421428174Silentrs747526024S432S0.26
COADchr14213854713'UTRnovel0.78
COADchr1421393201Missense_Mutationrs377109513M2125V0.16
COADchr1421403198Missense_MutationNAR1178H0.14
COADchr1421428046Missense_MutationNAR475H0.17
COADchr1421392619Missense_MutationNAS2220I0.47
COADchr1421394082Frame_Shift_DelNAL1905Ffs*300.3
COADchr1421400509SilentNAL1492L0.23
COADchr1421414365Missense_MutationnovelR693M0.08
COADchr1421400054Nonsense_MutationnovelR1582*0.19
COADchr1421415835Nonsense_MutationnovelE597*0.06
COADchr1421393540In_Frame_InsnovelS2094dup0.21
COADchr1421403521Missense_MutationNAH1150Q0.57
COADchr1421390981Missense_Mutationrs751755659P2383L0.37
COADchr1421405209Missense_MutationNAG1103C0.2
COADchr1421392513SilentnovelI2255I0.14
COADchr1421395350Splice_RegionnovelG1710G0.11
COADchr1421405372Missense_MutationNAI1048M0.2
COADchr1421406951Missense_Mutationrs763248373R938C0.13
COADchr1421408410Missense_MutationNAF878I0.16
COADchr1421415794SilentnovelP610P0.21
COADchr1421426189Missense_MutationNAN552T0.23
COADchr1421393920Missense_MutationNAA1959T0.42
COADchr1421400554Nonsense_MutationNAR1477*0.24
COADchr1421400903Missense_Mutationrs759526072R1448W0.37
COADchr1421406924Missense_MutationNAI947V0.32
COADchr1421392779Missense_Mutationrs770593901V2167I0.31
COADchr1421393914Missense_MutationnovelR1961C0.43
COADchr1421400267Frame_Shift_DelnovelV1538*0.4
COADchr1421427992Missense_Mutationrs755646683R493Q0.31
COADchr1421400477SilentnovelG1502G0.18
COADchr1421385930Missense_MutationnovelM2477L0.09
DLBCchr1421415871Frame_Shift_InsnovelY585Ifs*120.26
ESCAchr1421400179In_Frame_InsnovelY1566dup0.23
ESCAchr1421399702Missense_MutationnovelE1607D0.28
ESCAchr1421400267Frame_Shift_DelnovelV1538*0.42
ESCAchr1421429153SilentnovelL342L0.36
ESCAchr1421385660Missense_MutationnovelP2567A0.42
ESCAchr1421430852SilentnovelA264A0.09
ESCAchr1421393581Missense_MutationnovelE2072Q0.44
ESCAchr1421430891SilentnovelQ251Q0.5
ESCAchr1421395879Nonsense_MutationnovelK1689*0.1
GBMchr1421392663Frame_Shift_DelnovelS2202Wfs*50.31
GBMchr1421429068Missense_MutationNAQ371E0.17
GBMchr1421403587Nonsense_MutationnovelM1128delinsIIERNLV*LD*0.12
GBMchr1421402102Missense_MutationnovelL1306P0.14
GBMchr1421386025Missense_MutationnovelN2445S0.48
GBMchr1421391910SilentnovelL2270L0.42
GBMchr1421392728Missense_MutationnovelE2184K0.06
GBMchr1421401431Missense_MutationnovelD1382G0.33
GBMchr1421399628Missense_MutationnovelS1632L0.25
GBMchr1421408371Missense_MutationNAG891R0.24
GBMchr1421392583Missense_MutationnovelV2232A0.05
GBMchr1421385917Missense_MutationnovelP2481L0.62
GBMchr1421392542Missense_MutationnovelM2246V0.09
GBMchr1421393544Missense_MutationnovelS2084C0.11
GBMchr1421429035Nonsense_MutationnovelQ382*0.15
GBMchr1421405796Frame_Shift_DelnovelH992Lfs*340.4
HNSCchr1421429328Missense_MutationnovelS284L0.26
HNSCchr1421391543Missense_MutationnovelE2329K0.22ResIII
HNSCchr1421405864Nonsense_MutationnovelE970*0.34
HNSCchr1421394940Nonsense_MutationnovelE1788*0.29
HNSCchr1421427946SilentnovelG508G0.08
HNSCchr1421402497Missense_MutationnovelA1241T0.41
HNSCchr1421402079Missense_MutationnovelA1314P0.15
HNSCchr1421394966Missense_MutationnovelR1779L0.36
HNSCchr1421412998Splice_SitenovelX715_splice0.2
HNSCchr1421393639Frame_Shift_InsnovelL2053Sfs*140.21
HNSCchr1421394127Missense_MutationnovelI1890V0.77
HNSCchr1421428025Missense_MutationnovelR482P0.07
HNSCchr1421405827Missense_MutationnovelN982S0.45
HNSCchr1421392184Intronnovel0.54
HNSCchr1421392646Missense_MutationnovelS2211C0.11
HNSCchr1421402474Missense_MutationnovelQ1248H0.26
HNSCchr1421405242Missense_MutationNAR1092C0.41
HNSCchr1421406999Missense_MutationnovelA922T0.56
KIRCchr1421385919In_Frame_InsnovelA2480_P2481insGGDE0.05
KIRCchr1421385920Missense_MutationnovelA2480G0.03
KIRCchr1421408803In_Frame_InsnovelW796delinsLKDTIFKKNRVCR0.16
KIRCchr1421405794Missense_MutationNAF993S0.81
KIRCchr1421385646SilentNAA2571A0.06
KIRPchr1421401999Frame_Shift_DelnovelI1341Sfs*430.46
KIRPchr1421400042Missense_MutationnovelY1586N0.3
KIRPchr1421400043SilentnovelY1585Y0.29
KIRPchr1421394363Frame_Shift_DelnovelK1838Rfs*530.32
KIRPchr1421394129Missense_Mutationrs777867742R1889H0.41
KIRPchr1421392551Frame_Shift_DelnovelR2243Afs*190.29
KIRPchr1421406871SilentnovelL964L0.35
KIRPchr1421429295Missense_MutationnovelQ295L0.03
KIRPchr1421394429Missense_MutationNAE1816V0.38
LAMLchr1421430973Nonsense_MutationnovelL224*0.09
LAMLchr1421406937Nonsense_MutationnovelW942*0.27
LGGchr1421415891Missense_MutationNAR578H0.54
LGGchr1421429102SilentnovelS359S0.11
LGGchr1421399996Missense_MutationNAG1601E0.29
LGGchr1421393681SilentNAP2038P0.07
LGGchr1421408309Splice_Regionnovel0.07
LIHCchr1421409886Missense_Mutationrs747838726R777W0.11
LIHCchr1421428150SilentNAS440S0.33
LIHCchr1421385866Missense_MutationnovelH2498P0.29
LUADchr1421400030Nonsense_MutationNAE1590*0.26
LUADchr1421401431Missense_MutationnovelD1382G0.14
LUADchr1421405273Missense_MutationNAM1081I0.38
LUADchr1421395331Missense_MutationNAD1717Y0.27
LUADchr1421408802Nonsense_MutationNAW796*0.17
LUADchr1421409946Missense_MutationNAE757Q0.16
LUADchr1421394134Silentrs746231563L1887L0.35
LUADchr1421400035Missense_MutationnovelR1588K0.13
LUADchr1421402505Splice_SitenovelX1239_splice0.15
LUADchr1421399672Silentrs764738563Q1617Q0.17
LUADchr1421402452Missense_MutationNAR1256C0.13
LUADchr1421426240Splice_SitenovelX534_splice0.23
LUADchr1421431105Missense_MutationnovelA180V0.1
LUADchr1421409986Splice_Regionrs766074272P743P0.28
LUADchr1421428071Missense_MutationNAE467K0.13
LUADchr1421394064Missense_MutationnovelA1911S0.15
LUADchr1421429191Missense_MutationnovelA330S0.24
LUADchr1421431204Missense_MutationnovelS147I0.38
LUADchr1421400188Nonsense_MutationNAE1564*0.16
LUADchr1421430847Missense_MutationnovelG266V0.21
LUADchr1421429188Nonsense_MutationnovelQ331*0.17
LUADchr1421403087Missense_MutationNAG1215V0.15
LUADchr1421405320Nonsense_MutationNAE1066*0.32
LUADchr1421415792Missense_MutationnovelE611V0.17
LUADchr1421392217Intronnovel0.13
LUADchr1421392644Missense_MutationNAP2212A0.09
LUADchr1421394993Missense_MutationNAA1770V0.23
LUADchr1421392509Missense_MutationNAD2257H0.18
LUADchr1421426129Missense_MutationnovelQ572L0.14
LUADchr1421393972SilentNAG1941G0.46
LUADchr1421391565SilentnovelV2321V0.1
LUADchr1421395893Splice_SitenovelX1684_splice0.11
LUADchr1421402053SilentnovelG1322G0.05
LUADchr1421429109Missense_MutationnovelP357L0.07
LUADchr1421392771Missense_MutationnovelQ2169H0.07
LUADchr1421415834Missense_MutationNAE597V0.24
LUADchr1421429187Missense_MutationNAQ331L0.1
LUADchr1421431121Missense_MutationnovelV175L0.14
LUSCchr1421415908Splice_SiteNAX573_splice0.22
LUSCchr1421393710Missense_Mutationrs145300090E2029K0.18
LUSCchr1421409949Frame_Shift_InsnovelY756Pfs*90.31
LUSCchr1421394933Missense_MutationnovelA1790V0.18
LUSCchr1421428030Missense_MutationnovelI480M0.18
LUSCchr1421426198Missense_MutationNAS549L0.27
LUSCchr1421430982Missense_MutationnovelN221I0.49
LUSCchr1421402418Frame_Shift_InsnovelM1267Rfs*200.13
LUSCchr1421415829Missense_MutationNAE599K0.23
LUSCchr1421400897Missense_MutationnovelE1450Q0.06
LUSCchr1421415829Missense_MutationNAE599K0.27
LUSCchr1421395020Missense_MutationnovelK1761R0.21
LUSCchr1421430822SilentnovelT274T0.24
LUSCchr1421412978Missense_MutationNAP721S0.58
LUSCchr14214318585'Flanknovel0.39
LUSCchr1421392779Missense_MutationNAV2167F0.27
LUSCchr1421391474Nonsense_Mutationrs756631600R2352*0.19ResIII
LUSCchr1421427955Missense_MutationnovelK505N0.39
LUSCchr1421392778Missense_MutationnovelV2167A0.35
LUSCchr1421430952Missense_MutationnovelN231I0.25
LUSCchr1421415585Missense_MutationnovelV653L0.31
LUSCchr1421400230Missense_MutationNAD1550N0.33
MESOchr1421402099Frame_Shift_DelnovelL1307*0.33
OVchr1421431170Missense_MutationnovelK158N0.08
OVchr1421401419Missense_MutationnovelD1386V0.15
OVchr1421393680Missense_MutationnovelQ2039K0.04
OVchr1421393142SilentnovelL2144L0.19
OVchr1421394140SilentnovelR1885R0.1
OVchr1421408782Missense_MutationNAH803R0.65
OVchr1421393677Missense_MutationnovelD2040H0.12
OVchr1421392718Missense_MutationnovelT2187K0.12
OVchr1421405241Missense_MutationNAR1092H0.35
OVchr1421393487Missense_MutationnovelE2103G0.32
OVchr1421391588Missense_Mutationrs371169926R2314W0.1ResIII
OVchr1421402374Missense_MutationNAL1282V0.39
OVchr1421391015Missense_MutationnovelN2372H0.18
OVchr1421428254Missense_MutationNAA406P0.73
OVchr1421393677Missense_MutationnovelD2040Y0.07
PAADchr1421393492SilentnovelE2101E0.16
PAADchr1421406962Missense_MutationnovelC934S0.18
PAADchr1421391508Nonsense_MutationnovelW2340*0.17ResIII
PAADchr1421393585SilentnovelD2070D0.11
PAADchr1421395072Missense_MutationnovelA1744T0.08
PAADchr1421400240SilentnovelI1546I0.22
PAADchr1421400960Missense_Mutationrs780639697R1429W0.21
PAADchr1421426232Missense_MutationnovelP538S0.09
PAADchr1421431009Missense_Mutationrs771587494R212Q0.15
PRADchr1421392546SilentNAR2244R0.06
PRADchr1421392729Missense_MutationnovelQ2183H0.16
PRADchr1421393665Nonsense_MutationNAR2044*0.33
READchr1421402429Silentrs368465266Y1263Y0.15
READchr1421401066Missense_MutationNAN1393K0.25
READchr1421408450SilentnovelV864V0.08
READchr1421415737Missense_MutationnovelM629I0.04
READchr1421405309Missense_MutationNAF1069L0.45
READchr1421406919Missense_MutationNAD948E0.26
READchr1421401029Missense_Mutationrs774260771R1406C0.31
SARCchr1421393685Missense_MutationnovelT2037N0.21
SARCchr1421426244Splice_SitenovelX534_splice0.17
SARCchr1421400576SilentnovelR1469R0.1
SKCMchr1421405738Missense_MutationNAL1012F0.07
SKCMchr1421394334Missense_MutationNAH1848Y0.45
SKCMchr1421400898SilentnovelV1449V0.16
SKCMchr1421428131Missense_MutationnovelE447K0.31
SKCMchr1421403635SilentNAF1112F0.33
SKCMchr1421403635SilentNAF1112F0.18
SKCMchr1421392580Missense_MutationNAS2233I0.27
SKCMchr1421403646SilentNAL1109L0.67
SKCMchr1421408822Missense_Mutationrs776528619R790C0.23
SKCMchr1421393914Missense_MutationnovelR1961C0.45
SKCMchr1421393915SilentnovelA1960A0.46
SKCMchr1421393498SilentnovelE2099E0.5
SKCMchr1421394029Missense_MutationnovelK1922N0.27
SKCMchr1421401014SilentnovelL1411L0.36
SKCMchr1421403033Missense_MutationnovelP1233L0.3
SKCMchr1421403034Missense_MutationnovelP1233S0.3
SKCMchr1421392806Missense_Mutationrs371915075R2158C0.07
SKCMchr1421397892Missense_MutationNAG1661A0.19
SKCMchr1421408460Missense_MutationnovelP861L0.13
SKCMchr1421408461Missense_MutationnovelP861S0.12
SKCMchr1421428244Missense_MutationNAS409F0.11
SKCMchr1421430997Missense_MutationNAS216F0.18
SKCMchr1421409868Missense_MutationNAP783S0.09
SKCMchr1421405224Missense_MutationNAP1098S0.63
SKCMchr1421408753Missense_MutationNAE813K0.46
SKCMchr1421393225Missense_MutationnovelE2117K0.3
SKCMchr1421402076Missense_MutationNAI1315F0.11
SKCMchr1421415642Missense_MutationNAE634K0.38
SKCMchr1421401956Splice_SiteNAX1354_splice0.21
SKCMchr1421391927Missense_MutationNAT2264K0.19
SKCMchr1421409931Missense_MutationNAE762K0.43
SKCMchr1421415782Silentrs376100482L614L0.61
SKCMchr1421429309SilentNAV290V0.11
SKCMchr1421429070Missense_MutationNAT370I0.11
SKCMchr1421408467Missense_MutationnovelH859Y0.4
SKCMchr1421402432SilentnovelS1262S0.35
SKCMchr1421427866Splice_Regionnovel0.62
SKCMchr1421431014SilentnovelP210P0.82
SKCMchr1421405307Missense_MutationNAS1070F0.38
SKCMchr1421391610SilentnovelH2306H0.23
SKCMchr1421403478SilentnovelL1165L0.29
SKCMchr1421394295Missense_MutationNAP1861S0.25
SKCMchr1421426234Missense_MutationnovelT537I0.43
SKCMchr1421393820Missense_Mutationrs372488156R1992H0.26
SKCMchr1421427981Nonsense_MutationnovelE497*0.46
SKCMchr1421393752Nonsense_MutationNAQ2015*0.53
SKCMchr1421402433Missense_MutationNAS1262F0.18
SKCMchr1421394070Missense_MutationNAR1909W0.23
SKCMchr1421431124Missense_Mutationrs757770866H174Y0.48
SKCMchr1421403544Missense_MutationnovelP1143S0.24
SKCMchr1421429283Missense_MutationnovelP299L0.34
SKCMchr1421393711Silentrs754552862H2028H0.39
SKCMchr1421393712Missense_MutationnovelH2028L0.39
SKCMchr1421402115Missense_MutationnovelE1302K0.25
SKCMchr1421400541Missense_MutationNAT1481I0.26
SKCMchr1421402119Missense_MutationnovelK1300N0.17
SKCMchr1421403583Missense_Mutationrs376815460R1130C0.38
SKCMchr1421392792SilentNAN2162N0.42
SKCMchr1421403573Missense_MutationNAG1133D0.13
STADchr1421429327Silentrs765203840S284S0.47
STADchr1421392210Intronnovel0.23
STADchr1421428194Frame_Shift_InsnovelE426*0.32
STADchr1421391527Missense_Mutationrs373946888R2334Q0.26ResIII
STADchr1421427993Missense_Mutationrs774630592R493W0.44
STADchr1421428121Missense_Mutationrs774081833R450H0.28
STADchr1421394071Frame_Shift_InsnovelR1909Sfs*190.08
STADchr1421392206Intronnovel0.09
STADchr1421400267Frame_Shift_DelnovelV1538*0.15
STADchr1421408438SilentNAL868L0.23
STADchr1421408396Silentrs200953445T882T0.4
STADchr1421393680Nonsense_MutationNAQ2039*0.19
STADchr1421400578Missense_Mutationrs375862520R1469C0.22
STADchr1421391464Missense_Mutationrs752792676A2355V0.15
STADchr1421395057Missense_MutationnovelL1749F0.26
STADchr14214318205'Flanknovel0.11
STADchr1421392611Missense_MutationNAS2223P0.06
STADchr1421394129Missense_Mutationrs777867742R1889H0.23
STADchr1421391902Silentrs369570478A2272A0.14
STADchr1421405397Frame_Shift_DelNAN1040Tfs*120.24
STADchr1421393816SilentNAT1993T0.14
STADchr1421428053Missense_MutationNAR473C0.38
STADchr1421394129Missense_Mutationrs777867742R1889H0.28
STADchr1421400605Nonsense_MutationNAR1460*0.34
STADchr1421427964SilentNAR502R0.2
STADchr1421427950Missense_MutationNAA507V0.37
STADchr1421402444In_Frame_InsnovelL1257_I1258insMYRL0.14
STADchr14214318345'Flanknovel0.28
STADchr1421415739Missense_Mutationrs757161902M629V0.06
STADchr1421402418Frame_Shift_InsnovelM1267Rfs*200.29
STADchr1421393691Missense_Mutationrs374379959R2035Q0.4
THYMchr1421400057Frame_Shift_DelnovelV1581Yfs*70.43
UCECchr1421400554Nonsense_MutationNAR1477*0.37
UCECchr1421400988Missense_MutationNAF1419L0.33
UCECchr1421405738Missense_MutationNAL1012I0.33
UCECchr1421414345Missense_MutationNAR700C0.31
UCECchr1421428083Missense_MutationNAR463W0.03
UCECchr1421427965Missense_Mutationrs369696938R502H0.31
UCECchr1421426131Frame_Shift_InsnovelQ572Sfs*100.12
UCECchr1421394988Missense_MutationNAR1772C0.47
UCECchr1421393665Nonsense_MutationNAR2044*0.22
UCECchr1421429099Silentrs769647344S360S0.15
UCECchr1421394082Frame_Shift_DelNAL1905Ffs*300.15
UCECchr1421408719Missense_MutationnovelF824C0.06
UCECchr14213853103'UTRrs5535090910.45
UCECchr1421391510Missense_MutationnovelW2340R0.36ResIII
UCECchr1421402379Missense_MutationnovelA1280D0.41
UCECchr1421429323Missense_Mutationrs762427755R286C0.37
UCECchr1421391851SilentnovelN2289N0.47
UCECchr1421403648Frame_Shift_InsNAI1108Nfs*70.41
UCECchr1421429134Nonsense_MutationnovelQ349*0.04
UCECchr1421391468Missense_MutationNAL2354I0.36
UCECchr1421392629Nonsense_MutationnovelR2217*0.5
UCECchr1421428115Missense_MutationnovelL452W0.25
UCECchr1421400953Missense_MutationnovelR1431H0.45
UCECchr1421402452Missense_MutationNAR1256C0.41
UCECchr1421415795Missense_MutationnovelP610H0.39
UCECchr1421428169Missense_MutationnovelA434V0.43
UCECchr1421391051Missense_MutationnovelR2360C0.22
UCECchr1421394118Missense_MutationnovelL1893I0.42
UCECchr1421394448Missense_Mutationrs777491813V1810M0.39
UCECchr1421402125Missense_MutationnovelF1298L0.18
UCECchr1421406925SilentnovelI946I0.22
UCECchr1421408413Nonsense_MutationnovelE877*0.35
UCECchr1421414958Missense_MutationNAF668L0.14
UCECchr1421405280Missense_MutationNAT1079I0.44
UCECchr1421385771Missense_MutationNAR2530W0.17
UCECchr1421393139Silentrs748531762L2145L0.22
UCECchr1421394163Missense_Mutationrs772751525I1878V0.11
UCECchr1421402087Missense_MutationNAA1311V0.22
UCECchr1421409939Missense_MutationNAS759N0.21
UCECchr1421392545Missense_MutationnovelG2245C0.34
UCECchr1421399678SilentnovelV1615V0.39
UCECchr1421415755SilentnovelG623G0.41
UCECchr1421400580Missense_MutationNAG1468E0.46
UCECchr1421402414Missense_MutationNAF1268L0.34
UCECchr1421403648Frame_Shift_InsNAI1108Nfs*70.3
UCECchr1421391016Frame_Shift_InsNAN2371Kfs*20.47
UCECchr1421385707Missense_MutationNAS2551Y0.37
UCECchr1421431137In_Frame_InsnovelS169_V170insQR0.08
UCECchr1421403103Missense_Mutationrs757278444R1210W0.42
UCECchr1421401437Frame_Shift_DelnovelK1380Rfs*40.17
UCECchr1421405309Missense_MutationNAF1069L0.34
UCECchr1421391558Missense_MutationNAT2324A0.47ResIII
UCECchr1421391831Splice_SiteNAX2295_splice0.43
UCECchr1421400500Missense_Mutationrs766456579R1495C0.12
UCECchr1421405242Missense_MutationNAR1092C0.47
UCECchr1421426165Missense_MutationNAA560V0.22
UCECchr1421414963Nonsense_MutationnovelE667*0.45
UCECchr1421405411Missense_MutationnovelE1035D0.27
UCECchr1421427950Missense_MutationnovelA507D0.31
UCECchr1421386022Missense_Mutationrs763909898T2446M0.33
UCECchr1421393711Silentrs754552862H2028H0.36
UCECchr1421401464Missense_MutationnovelP1371L0.34
UCECchr1421402494Nonsense_MutationnovelR1242*0.4
UCECchr1421409886Missense_Mutationrs747838726R777W0.38
UCECchr1421428065Missense_MutationNAI469V0.35
UCECchr1421391017Frame_Shift_Delrs751094013N2371Ifs*60.34
UCECchr1421408416Nonsense_MutationnovelR876*0.31
UCECchr1421430888SilentnovelP252P0.23
UCECchr1421397880Missense_MutationnovelD1665G0.34
UCECchr14213852013'UTRnovel0.45
UCECchr1421391003Missense_MutationnovelL2376V0.06
UCECchr1421394124Nonsense_MutationnovelE1891*0.18
UCECchr1421385877SilentnovelH2494H0.46
UCECchr1421402440Missense_MutationNAR1260C0.54
UCECchr1421394178Missense_MutationnovelL1873M0.55
UCECchr1421426208Missense_MutationNAR546C0.43
UCECchr1421431184Nonsense_MutationnovelQ154*0.44
UCECchr1421403187Nonsense_MutationnovelR1182*0.12
UCECchr1421399984Missense_MutationNAA1605V0.26
UCECchr1421400240SilentnovelI1546I0.08
UCECchr1421414958Missense_MutationNAF668L0.29
UCECchr1421394071Missense_MutationnovelD1908E0.32
UCECchr1421405322Missense_MutationnovelL1065S0.43
UCECchr1421414958Missense_MutationNAF668L0.33
UCECchr1421385922SilentnovelG2479G0.31
UCECchr1421386138SilentnovelP2407P0.4
UCECchr1421402429Silentrs368465266Y1263Y0.29
UCECchr1421429035Nonsense_MutationnovelQ382*0.29
UCECchr1421392573SilentNAA2235A0.13
UCECchr1421401029Missense_Mutationrs774260771R1406C0.18
UCECchr1421394477Missense_MutationnovelR1800K0.41
UCECchr1421400569Nonsense_MutationNAR1472*0.1
UCECchr1421386101Missense_Mutationrs371294659R2420C0.46
UCECchr1421427945Frame_Shift_DelnovelE509Rfs*30.35
UCECchr1421415590Missense_MutationNAR651Q0.2
UCECchr1421427937In_Frame_InsnovelK512_E513insNPREK0.01
UCECchr1421385771Missense_MutationNAR2530W0.33
UCECchr1421394061Missense_MutationnovelL1912V0.33
UCECchr1421405311Missense_MutationnovelF1069V0.31
UCECchr1421427898SilentnovelA524A0.33
UCECchr1421394423Missense_Mutationrs371906576D1818G0.2
UCECchr1421428082Missense_MutationnovelR463Q0.45
UCECchr1421403103Missense_Mutationrs757278444R1210W0.46
UCECchr1421402498Missense_MutationnovelQ1240H0.19
UCECchr1421408416Nonsense_MutationnovelR876*0.33
UCECchr1421400060Missense_MutationNAR1580W0.21
UCECchr1421405381Missense_MutationnovelQ1045H0.42
UCECchr1421426155SilentnovelP563P0.56
UCECchr1421394988Missense_MutationNAR1772C0.45
UCECchr1421409990Splice_SiteNAX743_splice0.32
UCECchr1421405760SilentnovelE1004E0.27
UCECchr1421403647SilentNAI1108I0.32
UCECchr1421426165Missense_MutationNAA560V0.11
UCECchr1421400183Missense_MutationnovelS1565R0.14
UCECchr1421405402Missense_MutationnovelE1038D0.17
UCECchr14213854713'UTRnovel0.83
UCECchr1421393923Missense_MutationnovelL1958M0.29
UCECchr1421400613Splice_SitenovelX1457_splice0.25
UCECchr1421393770Missense_MutationnovelP2009S0.23
UCECchr1421394930Missense_Mutationrs370298280R1791Q0.09
UCECchr1421391589SilentNAT2313T0.24
UCECchr1421395051Missense_MutationnovelR1751C0.07
UCECchr1421401064Frame_Shift_DelnovelL1394Wfs*20.39
UCECchr1421406936Missense_MutationNAR943C0.13
UCECchr1421395080Missense_Mutationrs749428842P1741L0.47
UCECchr1421393749Missense_MutationnovelV2016F0.37
UCECchr1421405225SilentnovelH1097H0.31
UCECchr1421391016Frame_Shift_InsNAN2371Kfs*20.36
UCECchr1421392658Missense_MutationnovelE2207G0.25
UCECchr1421394967Missense_MutationNAR1779C0.37
UCECchr1421406908Missense_MutationnovelR952Q0.07
UCECchr1421402347Missense_MutationNAN1291D0.39
UCECchr1421394141Missense_MutationnovelR1885Q0.38
UCECchr1421429127Frame_Shift_InsNAI351Nfs*700.36
UCECchr1421414958Missense_MutationNAF668L0.37
UCECchr1421408495Missense_MutationnovelF849L0.07
UCECchr1421391903Missense_Mutationrs745726816A2272V0.17
UCECchr1421399666Missense_MutationnovelE1619D0.19
UCECchr1421403163Missense_MutationnovelA1190S0.21
UCECchr1421403514Missense_MutationnovelL1153M0.41
UCECchr1421408429SilentnovelI871I0.45
UCECchr1421415596Missense_MutationnovelS649Y0.18
UCECchr1421415897Missense_MutationnovelS576L0.18
UCECchr1421426208Missense_MutationNAR546C0.12
UCECchr14214318185'Flanknovel0.14
UCECchr1421405756Missense_MutationnovelL1006I0.39
UCECchr1421394454Nonsense_MutationNAR1808*0.31
UCECchr1421395029Missense_Mutationrs755975357R1758H0.31
UCECchr1421429321SilentNAR286R0.26
UCECchr1421400273Silentrs748561663G1535G0.41
UCECchr1421392574Missense_Mutationrs377559805A2235V0.38
UCECchr1421394454Nonsense_MutationNAR1808*0.32
UCECchr1421403203SilentnovelY1176Y0.29
UCECchr1421385707Missense_MutationNAS2551Y0.29
UCECchr1421427883SilentnovelG529G0.39
UCECchr1421393665Nonsense_MutationNAR2044*0.4
UCSchr1421391551Missense_MutationnovelL2326R0.29ResIII
UCSchr1421402060Missense_MutationnovelD1320G0.43
UCSchr1421402488Missense_MutationnovelH1244N0.27

Copy Number Variations (CNVs)
CancerTypeFreq Q-value
ACCAMP0.27780.056464
ACCDEL0.14440.19769
CHOLDEL0.36110.00040262
HNSCDEL0.11690.0025503
KIRPDEL0.16670.085174
LUSCDEL0.26550.0082553
PAADDEL0.0870.11332

Survival Analysis
CancerP-value Q-value
KIRC0.0001

Kaplan-Meier Survival Analysis

ACC0.0057

Kaplan-Meier Survival Analysis

BLCA0.042

Kaplan-Meier Survival Analysis

CESC0.037

Kaplan-Meier Survival Analysis

KICH0.015

Kaplan-Meier Survival Analysis

LIHC0.0099

Kaplan-Meier Survival Analysis

LGG0.0001

Kaplan-Meier Survival Analysis

CHOL0.025

Kaplan-Meier Survival Analysis

UVM0.0069

Kaplan-Meier Survival Analysis

Drugs

Select Dataset :


Input Drug :


Input Cell Line :


Eesembl ID



Cell lines and drugs in GSE70138 or GSE92742


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