RNA binding proteome (RBPome)
PID | Title | Method |
Time | Author | Doi |
---|
30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & HEK293 | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
29431736 | Capturing the interactome of newly transcribed RNA | NascentRICK & Hela | 2018 Feb 12 | Bao X | DOI: 10.1038/nmeth.4595 |
29431736 | Capturing the interactome of newly transcribed RNA | PolyT-RICK & Hela | 2018 Feb 12 | Bao X | DOI: 10.1038/nmeth.4595 |
29431736 | Capturing the interactome of newly transcribed RNA | RICK & Hela | 2018 Feb 12 | Bao X | DOI: 10.1038/nmeth.4595 |
30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & MCF10A | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
30607034 | Comprehensive identification of RNA protein interactions in any organism using orthogonal organic phase separation (OOPS) | OOPS & U2OS | 2019 Jan 3 | Queiroz RML | DOI: 10.1038/s41587-018-0001-2 |
Protein-Protein Interaction (PPI)
* RBP PPI network refers to all genes directly bind to RBP
Orthologs identified by RBPome
Ensembl ID | Gene Symbol | Coverage | Identiy |
Ortholog | Gene Symbol | Coverage | Identiy |
Species |
---|
ENSG00000101444 | AHCY | 100 | 77.696 | WBGene00019322 | ahcy-1 | 99 | 76.905 | Caenorhabditis_elegans |
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ENSG00000101444 | AHCY | 100 | 50.864 | ENSMUSG00000029772 | Ahcyl2 | 100 | 53.043 | Mus_musculus |
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ENSG00000101444 | AHCY | 100 | 71.429 | YER043C | | 98 | 71.041 | Saccharomyces_cerevisiae |
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