EuRBPDB

Description

RBPome

Literatures

Expression

Transcripts

Gene Model

PPI

Gene Ontology

Description

Ensembl ID: ENSG00000101546 (Gene tree)
Gene ID: 79863
Gene Symbol: RBFA
Alias: FLJ21172|HsT169|C18orf22
Full Name: ribosome binding factor A
Gene Type: protein_coding
Species: Homo_sapiens
Status: confidence
Strand: Plus strand
Length: 16,307 bases
Position: chr18:80,034,346-80,050,652
Accession: 26120
RBP type: non-canonical RBP
Summary: (Ribosome Binding Factor A) is a Protein Coding gene.

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & HEK293	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & Hela	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004
30528433	The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest	XRNAX & MCF7	2018 Dec 6	Trendel J	DOI: 10.1016/j.cell.2018.11.004

Literatures on RNA binding capacity

PID	Title	Article	Time	Author	Doi
12628255	Solution NMR structure of ribosome-binding factor A (RbfA), a cold-shock adaptation protein from Escherichia coli.	J Mol Biol	2003 Mar 21	Huang YJ	-
28512204	The human RNA-binding protein RBFA promotes the maturation of the mitochondrial ribosome.	Biochem J	2017 Jun 13	Rozanska A	doi: 10.1042/BCJ20170256.
17996707	Structural aspects of RbfA action during small ribosomal subunit assembly.	Mol Cell	2007 Nov 9	Datta PP	-
24214533	RBF1, a plant homolog of the bacterial ribosome-binding factor RbfA, acts in processing of the chloroplast 16S ribosomal RNA.	Plant Physiol	2014 Jan	Fristedt R	doi: 10.1104/pp.113.228338

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENST00000262197	RBFA-201	1219	-	ENSP00000262197	242 (aa)	-	Q8N0V3
ENST00000586847	RBFA-203	566	-	-	- (aa)	-	-
ENST00000593019	RBFA-205	1551	-	-	- (aa)	-	-
ENST00000591612	RBFA-204	1587	-	-	- (aa)	-	-
ENST00000306735	RBFA-202	1407	-	ENSP00000305696	343 (aa)	-	Q8N0V3

Gene Model

Click here to download ENSG00000101546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSG00000101546's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005515	protein binding	25416956.	IPI	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005739	mitochondrion	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0008150	biological_process	-	ND	Process