Transcript ID | Name | Length | RefSeq ID | Protein ID | Length | RefSeq ID | UniportKB ID |
---|---|---|---|---|---|---|---|
ENST00000566703 | RNF40-209 | 808 | - | - | - (aa) | - | - |
ENST00000563909 | RNF40-205 | 711 | - | ENSP00000455678 | 111 (aa) | - | H3BQ99 |
ENST00000566811 | RNF40-210 | 569 | - | ENSP00000457697 | 129 (aa) | - | H3BUL6 |
ENST00000565931 | RNF40-207 | 481 | - | ENSP00000460142 | 144 (aa) | - | I3L332 |
ENST00000324685 | RNF40-201 | 5634 | XM_011545997 | ENSP00000325677 | 1001 (aa) | XP_011544299 | O75150 |
ENST00000564260 | RNF40-206 | 768 | - | - | - (aa) | - | - |
ENST00000357890 | RNF40-202 | 3917 | - | ENSP00000350563 | 901 (aa) | - | O75150 |
ENST00000563683 | RNF40-204 | 4063 | - | ENSP00000455180 | 961 (aa) | - | H3BP71 |
ENST00000493683 | RNF40-203 | 5371 | - | - | - (aa) | - | - |
ENST00000602784 | RNF40-212 | 991 | - | ENSP00000473507 | 14 (aa) | - | R4GN66 |
ENST00000565995 | RNF40-208 | 586 | - | ENSP00000456538 | 174 (aa) | - | H3BS50 |
ENST00000567365 | RNF40-211 | 597 | - | ENSP00000477937 | 177 (aa) | - | A0A087WTK2 |
ensgID | SNP | Chromosome | Position | SNP-risk | Trait | PubmedID | 95% CI | Or or BEAT | EFO ID |
---|---|---|---|---|---|---|---|---|---|
ENSG00000103549 | rs11642862 | 16 | 30774503 | ? | Tonsillectomy | 28928442 | [0.036-0.087] unit increase | 0.0617 | EFO_0007924 |
Ensembl ID | Gene Symbol | Coverage | Identiy | Ortholog | Gene Symbol | Coverage | Identiy | Species |
---|---|---|---|---|---|---|---|---|
ENSG00000103549 | RNF40 | 98 | 49.028 | FBgn0086694 | Bre1 | 98 | 43.361 | Drosophila_melanogaster |
ENSG00000103549 | RNF40 | 99 | 66.667 | ENSG00000155827 | RNF20 | 100 | 70.297 | Homo_sapiens |
Go ID | Go_term | PubmedID | Evidence | Category |
---|---|---|---|---|
GO:0000151 | ubiquitin ligase complex | 16307923. | IDA | Component |
GO:0003730 | mRNA 3'-UTR binding | 19575011. | IDA | Function |
GO:0004842 | ubiquitin-protein transferase activity | 16307923. | IDA | Function |
GO:0005515 | protein binding | 10944455.16189514.16307923.17500595.19410543.21329877.25416956.26871637. | IPI | Function |
GO:0005634 | nucleus | 10944455.16307923. | IDA | Component |
GO:0005654 | nucleoplasm | - | IDA | Component |
GO:0005654 | nucleoplasm | - | TAS | Component |
GO:0005829 | cytosol | - | IEA | Component |
GO:0006511 | ubiquitin-dependent protein catabolic process | - | ISS | Process |
GO:0007346 | regulation of mitotic cell cycle | 19575011. | IMP | Process |
GO:0010390 | histone monoubiquitination | 16307923. | IDA | Process |
GO:0016020 | membrane | 19946888. | HDA | Component |
GO:0016567 | protein ubiquitination | - | TAS | Process |
GO:0017075 | syntaxin-1 binding | - | IEA | Function |
GO:0019898 | extrinsic component of membrane | - | IEA | Component |
GO:0031624 | ubiquitin conjugating enzyme binding | - | IEA | Function |
GO:0031625 | ubiquitin protein ligase binding | 16307923. | IPI | Function |
GO:0033503 | HULC complex | 19410543. | IDA | Component |
GO:0033523 | histone H2B ubiquitination | 16307923. | IDA | Process |
GO:0042803 | protein homodimerization activity | 10944455. | IPI | Function |
GO:0043005 | neuron projection | - | ISS | Component |
GO:0043434 | response to peptide hormone | - | IEA | Process |
GO:0043679 | axon terminus | - | IEA | Component |
GO:0044877 | protein-containing complex binding | - | IEA | Function |
GO:0046872 | metal ion binding | - | IEA | Function |
GO:1900364 | negative regulation of mRNA polyadenylation | 19575011. | IMP | Process |
GO:1901800 | positive regulation of proteasomal protein catabolic process | - | IEA | Process |
GO:1902916 | positive regulation of protein polyubiquitination | - | IEA | Process |
GO:2001168 | positive regulation of histone H2B ubiquitination | 19575011. | IMP | Process |